Paralichthys olivaceus (Japanese flounder): 109628634
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Entry
109628634 CDS
T06037
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109628634 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pov03036
]
109628634 (nfrkb)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
109628634 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
109628634
NCBI-ProteinID:
XP_019941400
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MDALTHMLTNAIDPKEENDGQITEECMLGNCRVNLPEDLLEDPDIFFSVMSESTWTNALT
DSQRQHLRQFLPQFPDNNAAEQDSTISDLFNNRDFNFGNPLHLAQKLFRDGYFNPEVVKY
RQLCAKSQRKRQLYSRQQYYHRLLKQILVSRKELLEFAVHNGLDFPPKRKLPTKSHAEMR
EPRVRRRLSRILKEVKTECGDSNASSDDDDISSWTAAPQSPSSPTVSLRVFPSLSTQDMK
STEKIELGEQDLKVMLQNHREKRKRQPDHPDLMTSDIHLGDVLSRANIGRKGTNMLHFDL
SLPKKKMRDERKKKKMRTIKVESEDPFESLAPTDTPSAPQGNIINSLPDTPSTPLQHIKE
EIVEECQSSPVAVEEIAVSFFSLLENILRTETLASTLMLEEKVQMWQSSPASSLNVWFSS
ASCWSDLVLQALQFLAGETKDGMIALPSGFAPFVEFSDDSQQWRWIGPTHDTEKDLSALF
QLWMDSKDLVVKTESEDMMEMTSPTQRGSTDYVVRPSTGDERQVFQVQEQQRYNQPHKAF
TFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEGT
RAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRHRSQ
EEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKDGGSKTPGCWEAGQDMGSNPMSPTP
TTPTPNTPGTPKSPLPCVATTPTKTVVPETIKTSPGVLLVSPPSLPQLGTILPTTKAGPP
VSQPVTSQHAARIVSHLAAGSLPQVRVVSTQAGLSSSAGSQKATLVHQTPHQIRMPLSVA
AKGISQTVVSVPLRTQSVSSPVHVPTTLSVSAVTVAKPPTGSPGSPANNPASPAVLQGVA
SSNIKQVSITGQLGMKTPGGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPD
MMATLAKSPVATVKLTPDFLGTATSKSISATLHVTPPHPSSASSTVSCTGEVQTTKASHI
TSTLLKAAGDTAIRLMPTLAVTADQKTRTFSTVTSPDKSGTTIRIMPGLGVIPQKQGQTI
TMTTTTGSKPITVSTCANVVTMAASVVAGAKGITVAPGASCSPLTLGTATATVRQVPATV
VTTQTGKLPTRITVPISVLNQPLKSKSVVTTPIVKGSLNANLSSLGRNIILTTMPAGTKL
IAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMATGSPKSVSTVVVTTAPTP
KCAPDPPPAPQQ
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcacacacatgctgacaaacgctattgatccaaaagaagaaaacgatgga
cagatcacagaggaatgcatgctgggaaactgcagggtcaaccttccagaggatctgctg
gaggaccctgacatcttcttctctgtgatgagcgagagcacctggactaacgcactgaca
gattcccagaggcagcaccttcgtcagtttttaccacagtttcctgacaacaatgctgcg
gagcaggacagcaccatcagtgatctgttcaacaacagagatttcaactttggtaacccc
cttcatcttgcacaaaaactattcagagatggttacttcaatcccgaggtggtcaagtac
agacagttgtgtgccaagtctcagagaaagcgacagttgtactcccgccagcagtattat
cacagactgttgaagcaaatcctcgtctccagaaaggagctgctggagtttgcggttcat
aatggtttggactttccaccaaaaagaaagttgccgaccaagagtcatgctgaaatgcgg
gaaccaagggtgaggagacgattgagccgcatattgaaggaggtcaaaactgagtgtgga
gacagcaatgcttcatctgatgatgacgacatatcgtcatggactgcagcaccacaatcc
ccttcctctccaactgtttcactcagagtctttcccagcctctctacccaagacatgaag
agtactgagaaaatagaactgggtgagcaagacttgaaagtcatgctgcaaaatcatcga
gagaagaggaagcgacagcctgaccatccggacttgatgacctctgatatccaccttgga
gatgtactttcaagagcaaatattggtcggaaggggactaatatgttacactttgatctg
tctctacctaagaagaaaatgagagatgaaagaaaaaagaagaaaatgaggacaataaaa
gtggaatctgaggatccctttgaaagtcttgcacctacagacacaccgtcagctccacaa
gggaacatcatcaactccttgcccgacacaccgtctactccactgcaacacatcaaggaa
gaaattgtggaggagtgtcagagcagcccggtcgcagttgaggaaatagctgtcagcttt
ttcagcttgttggagaacatcttaaggacagagactcttgccagtactttaatgttggag
gagaaagttcagatgtggcagtcctctccagccagctccctcaacgtgtggttttcatct
gcttcctgttggtctgacttggttcttcaagctctgcagtttcttgcaggggagactaaa
gatggcatgatcgcgctccccagtggctttgctccatttgtggagttttctgatgattct
cagcagtggaggtggattggccctactcatgatacagagaaggatctcagtgcactcttc
cagttgtggatggactctaaagatttagttgtcaagacagaaagtgaagacatgatggag
atgacttcacccacacaaagaggttcgactgattatgtggtgcggcccagcactggagat
gaaagacaagtgtttcaagtccaggagcagcagcgatacaaccagccacataaagccttc
acctttaggatgcatggctttgaatctgtggtggggcctgttaaaggagtgttcgataaa
gagatgtctctcaacaaagccagggagcacacgctgctccgctctgaccgaccgccatac
gtcaccattctctctctggtgcgggatgcggcagccaggttacccaatggagaaggaaca
agggcagagatctgtgaactgttgaaagactcacagtttcttgctccagatgtcactagt
gctcaggtgaacacagttgtcagtggagccctggatagacttcattatgaaaaagatcct
tgtgtgaaatacgacatcggccgcaaactgtggatttacctgcaccgtcatcgcagtcaa
gaggagtttgagcggatccaccaagctcaagctgcagctgcaaaagcgagaaaagctcta
cagcagaagcctaaaccagcatccaagcctaagtctggaagtaaagacggaggcagtaaa
acccctggatgttgggaggcgggacaggatatgggctccaatcccatgtcaccaacacca
actacacccaccccaaacacacctggaaccccgaagtcacccttaccctgcgtggccacc
acgccgacaaaaactgtagtcccagagacaataaaaaccagcccaggtgttctcctagtg
tccccaccttcgttgcctcagctgggaaccatcttacccaccactaaggctggcccacct
gtgtcccagccggtcacgtcccaacacgctgctcggattgtgagtcatctggcggcgggc
tcccttcctcaggtgcgggtagtttctactcaggcaggtttgagctcatcagcaggaagt
cagaaggccacactggtccatcagaccccccatcagatcaggatgccgctgtcagtggca
gccaagggtatttcgcagactgtggtgtctgtgcctctgaggactcagtctgtgagtagt
ccagtccacgtgccaaccaccctgtcagtgtcagcagtaactgtcgccaaacctccgact
ggatcacctggaagcccggccaacaaccctgcttcccctgctgtgctgcaaggagttgcc
agctccaacatcaaacaggtgtctatcacaggacagctgggaatgaagacaccaggagga
gcaggaattccaataactgctacaaacttgcgtattcagggtaaagatgtgctacgtctt
ccaccgtcctccatcactacagacgccaaaggccagacggtgctgcggataaccccagac
atgatggcgactctcgccaaatcaccagttgcaaccgtcaaactcacccctgacttcctg
ggcaccgccaccagcaagagcatatcagccactctgcatgtgacgccgccccacccttcc
tctgcctccagcactgtgtcctgcacaggggaagtacagaccactaaagcgagccacatc
acctccaccttgttgaaggcagcaggagacacagccatacgtctgatgccgacactggct
gtcacggccgaccaaaaaacgaggaccttctccaccgtgacctcccctgacaagagtggc
accaccattcggataatgccagggcttggtgttatccctcagaaacagggtcagaccatc
acaatgacgaccactactggcagtaaaccaatcactgtgtccacttgtgctaatgtggtg
accatggctgccagcgttgtagctggtgcgaaggggatcacagtggctcctggagcctct
tgttcacctctgacgttaggaacagctacggccactgtgcggcaggtccctgctacagtg
gttactacacaaacggggaagttacctacacgaatcactgtgccgatctctgtcctgaac
caaccactgaagagcaagagcgtagtgaccacaccgattgtaaaaggaagcctgaacgca
aacctcagcagcctgggcaggaacatcatcctcaccacgatgcctgctggcacaaagctg
attgcaggaaacaaaccagtcagctttgtcacagcacaacagttccaacagcttcagcag
caaggacaggccacacaggttcgcatccagacggttcaggcacagcagctccagcagcac
atggccacgggctctcccaaatcagtttccactgtcgtggtcacaacagcaccgacaccc
aaatgtgcacctgatcccccacctgctcctcaacagtga
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