Paralichthys olivaceus (Japanese flounder): 109628644
Help
Entry
109628644 CDS
T06037
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109628644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109628644
03036 Chromosome and associated proteins [BR:
pov03036
]
109628644
Transcription factors [BR:
pov03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109628644
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109628644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Glyco_hydro_38N
Motif
Other DBs
NCBI-GeneID:
109628644
NCBI-ProteinID:
XP_019941418
LinkDB
All DBs
Position
Unknown
AA seq
1920 aa
AA seq
DB search
MSAAMLSSTNNKLNVLVNKLHEYLAHSTVEDSNGTPTSEDADGLKVRSCSVGDPRGQTAA
EAGVDTRYSRRKPSVVTKHSGLDESGDSNASEDVDLPATKNGHLDITRLPKGTILVRPEP
VDNGRDDFRGPEFRSRKSNVLRKEFSRRRGGVEHMGIVSCTACGRQVNHFQKDSFYRHPV
LKVLICKTCYKYYLSDDISKDGDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRK
ELSGILESKWYCYVCSPEPLCDLVLACDSVLENMEHIWHQQRRRNRAGPEKSELYDMSQL
PSNIPLDKWDHTGMDGNVVFNYNTLQISKEVTKKAKHLVDSTNTLNRTFINFIHTVTANN
QKPAVRPLYFKSFLSVVKGLRRSLAVFEENLKEEFSDLDVLSSWEKLISDGFETQPVTDK
ELDISNERCLSVLQKLAAEHLEDEDSESKCCIDRRSPHECPGEDMDSDSHKAGQRMEKTS
PKPTEPGVNMTKKLVVKLTPVPMEQEPSSHAPKVEDDIHTKDKKSKKKDVSEDKETGVVS
SKIDSKLSNDSTSTSHLEEEQGNRRSPRVKTTPLRRPSDVKAQTSLSAVDSDSDSDPEET
PSTAPAKNCEKQSLRSARDDSDSDEVPPALLERAAMTQSSDEAQSDDNGGKASTRVAKKC
LFWLTKNTPISPEKMRRKRKMLDRPHESDSSERRAKVLKEMGTDYSSDDQESQKKIKHLN
TLRPIAKPHLMKREEESVARKQGRIQAGKSKNKSHQEKLESSFSSSEEDDHDDDSGSDGS
DQKMKPITEDVSLLGAAAFHQSSGDEDHSGPSWAAEDDDDPENRIAKKMLLAQIKANYSS
GDDISSDEETQEEESESEGGDEVKQGNDENGADENEADENGEDVASEPSDNTSDGSIFRH
HLLRHKLTLDEGTASDKGAKEGEVGKERRKKKAGSKPQSSDSESDDESVETNVDDLGLSE
ELSQSEDETNEEKLERLSTKTKKNLSSSQQKKQVPCIWLSDTDDEKEQNDQEDGDEGTED
KSTPKQRKKIRKIIDDENLRTETQEALREEEERCKRLADREQQMEDRREIIVIEDELSQV
VCPVTTKLVLDQDEETKEPLVQVHRNLVTRLKPHQVDGVQFIWDSCCESVKKANSSPGSG
CILAHCMGLGKTLQMVTFLHTVLLSTNLKFRTALVVCPLNTNLNWVSEFKKWQSTMGEDK
VKVRQLATVKNTPERLRALQEWHREGGVMIMGYDIYRILSLAKNMNEEWKKQLKTILVDP
GPDFVVCDEGHILRNDSSGISKALNGIRTRRRVVLTGTPMQNNLVEYHCMVNFIKKNLLG
SLGEFRNRFINPIENGQCADSTPKDVRIMKKRAHVLHAMLAGCVQRRDYSELTQFLPPKH
EYVLAVRITPLQYKLYRYYLDHISGVGSIMNSAKVKIGANLFKDFQALGRIWTHPWCLQL
SFISTEKKRHLKKKTQVNVAALLNNPQPSVAESGLKENNGTGVNNPNNTAMVNVDASTAA
PGVEGETATLSPMSDECWHKSLLSESDANILQHSGKMVLLFEILRMAEDLDEKVLVFSQS
LISLNLIEDFLAASHRARDPSAFKVGSWIKNVDYYRLDGTINATNRKKWADLFNNPANVR
GRLFLISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQG
TMEEKIYDRQVTKQSLSYRVVDQQQIERHFTLFELKELYTFEPDLLNDPNSKKSKRTASA
FPKDHILTQMLETCKDQIVSYHEHESLLDHKQEEELSEAERKAAWAEYEAESKTASLAAS
SGQDTLQLKTNEELLELLNRCRVNVSAAFLSLQRMRSHTPEEYMLQTRQQYPHLLEHEMK
TKAEQWRMCDQKEQDRRNAFYREVLSQQQTFTLRIQAILNSRRNQAMQTAAITVNQPAQI
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcgatgctcagctctaccaacaacaagttgaatgtattggtcaacaagcta
catgagtacttagctcattccaccgttgaggacagcaatggcacaccaacctcagaggac
gctgatggtctgaaagtcaggagctgttctgtgggagacccaagaggccagactgcagca
gaggcaggtgtggataccagatactcaaggagaaaaccttctgttgtcacaaagcactct
ggactagatgaatctggggattcgaatgcaagtgaggacgttgatttaccagccaccaaa
aatggtcaccttgatatcacaagactgcctaaaggcaccatactggtcaggcctgagcct
gtcgataatggaagagatgacttcaggggtcctgaatttcgcagccgaaaatccaacgtg
ctgcggaaagagttctcaagaagacgcggaggagttgaacacatgggaattgtcagttgc
actgcatgtggccgacaagtgaaccactttcagaaagattccttctaccggcatccagtt
ctgaaagtacttatttgcaagacttgctacaagtattacttaagtgacgacatcagcaag
gatggagatggaatggatgagcagtgcagatggtgtgctgaaggaggcaacttgatctgc
tgcgactactgtagtaatgccttctgcaagaagtgtattcttagaaacctgggaaggaag
gagctgtctggcatcttagagagtaaatggtactgctacgtgtgcagcccagagcccctt
tgtgatctggttttggcctgtgacagtgtcctcgagaacatggagcatatatggcatcag
cagcgcaggagaaaccgtgcgggcccagagaaatctgaactctacgacatgtcgcaatta
ccatcaaacattcctttggataaatgggatcacactggtatggatggtaatgtggtgttc
aactataacaccctgcagatttccaaggaggtgacaaaaaaagccaaacatttggtggat
tctacaaacacgttaaaccgaacatttatcaatttcattcatactgtgactgcaaacaat
cagaaacctgctgtgcggcctttgtactttaagtcttttttgtcagttgttaaaggcttg
agaagatctctcgctgtatttgaggaaaacctcaaggaagaatttagtgacttggacgta
ttaagcagttgggagaaactcattagtgatggctttgagacacaacctgtgacagacaaa
gagctggatatctctaatgaaagatgcctgagtgtcttgcagaaattggcagctgaacat
ttggaagatgaggattctgagtctaagtgctgcatagataggagaagtccacatgagtgc
cccggggaggacatggattcagattcacacaaagctggacagaggatggaaaagacgagc
ccaaagcccactgaaccaggggtcaacatgaccaaaaaactagttgttaaacttacacct
gtgcctatggagcaggaaccctcctctcatgccccaaaggtggaagatgacattcacaca
aaggacaaaaagtcaaagaaaaaagatgtatcagaagataaagagacgggtgttgtgtct
tctaaaattgacagcaagctgagcaatgacagcactagtacatctcacctagaagaggaa
caaggcaatagacggtctcctcgtgtgaagacgacaccattgcgtcgaccaagtgatgtc
aaagcccaaacatctctttcagcagtagacagcgacagcgattcagaccctgaggaaact
cccagcacagcaccagccaaaaactgtgaaaaacaaagtctgaggtcagcaagggacgac
tctgactcagacgaagttcctccagctctgcttgagcgagcagccatgacgcaaagctct
gatgaggcccagagtgatgacaatggtggaaaagcgtcaactcgggtggccaagaaatgt
ctgttttggctcacgaagaacaccccgatctcacctgagaagatgcgccgaaaacgcaag
atgctggatcgtccccacgagtcggattcgagcgagagaagagccaaagtcctgaaggaa
atggggaccgattactctagtgatgatcaagagtcgcagaagaaaataaaacacttgaac
acgctgaggccaatagcgaagcctcacctcatgaaacgagaggaggaaagtgtggccaga
aagcaggggaggatacaggctgggaagtcgaaaaataaatctcatcaggaaaaattggaa
tcatcattctcatcgagtgaagaagatgaccatgatgatgactctgggagcgacggcagt
gatcagaaaatgaaaccaatcactgaagatgtgtccttgctgggggctgctgcattccac
caatcatcaggagatgaggatcattctgggccctcgtgggcagcagaagatgatgatgat
ccagaaaatagaatcgctaagaaaatgcttttggcccaaatcaaagccaactactcgtcg
ggggatgatatctcttcggacgaggagacacaggaggaggaatctgagtctgagggtggt
gatgaggtcaaacaaggcaatgatgaaaatggagcagatgaaaatgaagcagatgaaaat
ggtgaagacgtggcttcagaaccctctgacaacacgtctgatgggtccatcttcagacac
catctcctccgacacaaacttaccttagacgaggggacggcaagtgacaagggagcaaaa
gaaggtgaagttggaaaggagcggaggaagaaaaaagctggcagcaaaccccagagctct
gatagtgaaagtgacgatgagagtgtggagacgaatgtggatgaccttggattgagcgaa
gagctgagtcaatcagaagacgagaccaatgaagaaaagcttgaaagactctccactaaa
acgaagaaaaacctgagtagttctcaacagaagaaacaagtcccatgcatttggttgtct
gacactgacgatgaaaaggagcagaatgatcaggaggatggtgatgaggggactgaagat
aaatccactccaaaacaacgcaaaaagatccgtaaaatcatcgatgatgagaacctccgc
acagagacccaggaagcactgagagaggaggaggagaggtgcaaacgcctggcagatagg
gaacaacaaatggaggacaggagagagatcattgttatagaggatgagctgtctcaggtg
gtttgtcccgttacaacaaagctggtcctggatcaggacgaggagaccaaggagcccctg
gttcaggtgcacaggaacctggtgaccagactgaagcctcatcaggtggacggtgtccag
ttcatttgggacagttgctgcgagtctgtgaagaaggccaactcttcaccggggtcaggc
tgtatactggcacactgcatgggcctggggaagactctgcagatggttacgttcctccac
acggtgctgctctcaactaacctgaaattcagaactgccctggtcgtgtgtccactcaac
accaacctcaactgggtcagcgagttcaagaaatggcaaagcacaatgggagaggacaaa
gtcaaggttagacaactggccacagtgaagaacactccagaaagactccgtgctctgcag
gagtggcacagagagggaggtgttatgataatgggatacgatatttaccgcatcctgtca
ttagccaagaatatgaacgaggagtggaagaaacagttaaagacgatcctggtggatcca
ggcccagattttgtggtttgtgacgaggggcacatcctccgcaatgattcatctggcatc
tccaaagctttgaatggcatcaggactcgacgaagagtggtgctgactggaacaccaatg
cagaacaacctggttgagtaccactgcatggtcaacttcatcaaaaagaatcttctgggc
tcattgggcgaattccgaaaccgtttcatcaaccccatcgagaacggccagtgtgctgac
tcaacgccgaaagacgtccgaatcatgaagaagcgagcgcatgtgcttcatgcaatgttg
gctggatgtgtacagagaagagattactctgagttgactcagtttctacctcccaaacac
gagtatgtgctggcagtgcggattactccactgcagtataagttgtaccgctactacctt
gaccacatcagcggtgtgggttccatcatgaactctgcaaaggttaagattggagcgaac
ctcttcaaggactttcaggcgctcggccgaatctggactcatccctggtgccttcagctc
agcttcataagtacagaaaaaaagagacatttgaaaaagaagacccaagtaaatgtggca
gctctcctgaataacccacaacccagtgtggccgagagtggactgaaagagaacaacgga
acaggagtaaacaacccaaacaacactgcaatggttaatgtcgatgcatccacagctgct
ccaggagttgaaggtgagacagcaacactaagcccaatgtccgatgaatgctggcacaag
agtctgctctctgagagcgacgccaatatcctgcagcactctgggaagatggtgctcttg
tttgagatcctcaggatggctgaagacctggatgagaaagtgctcgtgttcagtcagtcc
ttgatctcattaaacctaatcgaggatttcctggcagcctctcatcgcgccagagaccca
tcagcattcaaagtcggcagctggattaaaaatgttgattactatcgtcttgatggtacc
atcaatgctacaaacaggaagaaatgggcagatctgttcaacaatcctgccaatgtccgc
gggcgactgtttctcatctcaacgaaagctggctctcttggcatcaacctcgtggctgcc
aacagggtcatcatctttgatgcctcgtggaatccgtcatacgacatacagagcatatac
agggtgtaccgcttcgggcagctgaaacaagtgtttgtgtaccgcttcctggctcagggc
accatggaggagaagatctatgatcggcaggtgaccaagcagtccttgtcctatcgagtg
gtggatcaacagcagatcgagaggcactttacccttttcgagctcaaagaactctacaca
tttgagccagatctgctgaatgacccaaactcgaagaaaagcaagaggacagcctctgct
tttccaaaggatcatatcctgacacagatgttggaaacctgtaaagatcagatagtgtcg
taccacgaacacgaatctctgctggaccataaacaagaggaggagctcagcgaagcagag
cgcaaagctgcctgggccgagtacgaggcagagtcaaaaaccgccagccttgcagccagc
tcgggtcaggacaccttacagttgaagaccaacgaagagctcttggaattacttaacagg
tgcagagtaaacgtatcagctgccttcctgtcgctgcagaggatgaggtctcacacccct
gaagaatacatgttacaaacgcggcaacagtatcctcatctgcttgaacacgagatgaag
accaaggcagagcagtggagaatgtgtgatcagaaggagcaggaccgccgaaatgccttt
tatcgcgaggttctttcacagcaacaaacattcacgctcagaatccaggccatactgaac
agtcgaagaaaccaagcgatgcagacggccgcgatcactgtgaaccagcctgcacagatt
tga
DBGET
integrated database retrieval system
