Paralichthys olivaceus (Japanese flounder): 109628733
Help
Entry
109628733 CDS
T06037
Symbol
rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109628733 (rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109628733 (rnf43)
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109628733 (rnf43)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109628733 (rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
pAdhesive_17
Motif
Other DBs
NCBI-GeneID:
109628733
NCBI-ProteinID:
XP_019941610
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MTVPQRRLAGLWPWLLMAALQVVLGQPGLESERPVLRAVIKVTLLKNELTGKPITLEGVF
VGGSAGYADGKLMQYHPLSLCNTSEDERQESEFITIVKLEHRVPRCLPLPDKARMALDKG
AQAVIFDVSDDANAAAELRETDALPRPVVLVEAEDAEELMGLVSNNEEAKVRIEIKVEQS
RWPHYDMGILLTIILAILTIVLIFAFRYKCKSNRTWDSVHQQTMRAINRLETKTYSSQGC
SGSQRHRAAWGSASSSNSSPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLVQHRTCP
LCMHNIMGEDKHIYRPERQTQRSRLQQSPEQSQGFLQPQPYSSPHNHPFPQHAIPFSLRT
HYPRGPSGPYPSLGHYSGSSPMDTQTLRFLTSRPLGSGCGYRLPAEGPGRPHRIGGNCRT
STHHYTPRRSCHNYRSSCPTQRSASCSRLHHTASGTPQTRGAPAHNRQDEGSCSGGSYHT
ERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYG
PGPGRGPRRNSLEAVAQARPRSLDSVVNKAGCPEEQPQTVFSHIHYHRHRHHHYEEGEHS
QGPSRGSDEEQGASAAAAPAALVLDKDSPVCPPKHSPCQCPKPDPTDRPSPGQGERHDHD
PSSPTGPPVLMSPIPLQLQPHCCHQGHGRPPAPLGRVSGCVLDGPSVRFHQSLDLPEDRS
IHIHYGQGQGFCCSPPELHPALLPVPLILDSGGMEEWPCCAGAHVVWQKRVQQARSEPQL
LGPGTSMDRPPCRLHHGAAADCNTDICLYCQTLHHNQGSEEESGV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcccccagcggcgcctggccgggctctggccgtggcttctcatggcggccctg
caggtggtgctgggccagccgggcctggagtccgagcggccggtcctccgagcggtcatc
aaggtgacactgctgaagaacgagctgacggggaagcccatcaccctggagggggtgttc
gtgggaggaagtgccggttacgcggatgggaaactaatgcagtatcaccctttgtctctg
tgcaacacaagcgaggatgaacggcaagagagcgagttcatcaccattgtcaagctggag
cacagggtaccccgctgcctgccgctgcccgataaggctcgcatggcactggacaaagga
gctcaggctgttatctttgacgtcagtgatgatgccaatgctgctgctgagctgcgagaa
acagacgcccttccccgaccagtcgtgctggtggaggccgaggatgcagaggagctgatg
ggtttggtcagcaataacgaggaggccaaagttcgcattgagatcaaggtggaacagtct
cgatggccacattatgacatgggtatcctgctgaccatcatcctggctattctcaccatc
gtcttaatctttgccttccgttacaagtgcaagtccaacaggacctgggactctgtccac
cagcagaccatgagggccatcaatcgactggagaccaaaacctatagctctcagggctgc
tcaggctcgcagcgccaccgagcggcctgggggtcagccagcagctccaactcgagccct
gtctgcgctatttgtctggaggagttccaggacgggcagcacctgaggatcatctcctgc
gctcatgagttccataaagactgtgtcgacccctggctggtgcagcaccgcacctgtccc
ctctgcatgcacaacatcatgggtgaggacaagcatatttacaggccagagcggcagacc
cagaggagcagactccagcagagtccagagcaaagtcaaggcttcctccaacctcagcct
tacagcagcccgcacaaccaccctttccctcagcatgctatccccttctctttaaggacc
cactacccacgtggaccctctggaccatatccctctctgggccactacagtggctcttct
cccatggacacgcaaactcttcgtttcctcaccagcaggccgcttggctctggctgtggg
taccgccttcctgcagagggtcccggaaggccccacaggattggaggtaactgcaggacg
tccactcaccactacacgcctcgtcgctcctgccacaactatcgttcatcctgtccaacc
cagcgcagtgcatcctgctcaagactgcaccacactgcctctggcacgccacagacccgt
ggagcgcctgcccacaatcggcaggacgagggcagctgctcaggtggaagctaccacaca
gaacgcagtggatatctggctgacgggccagcaagtgactccagctcagggccctgccat
ggctcctccagcgactcagttcttaactgtactgacgtgtccctgcagggagtttatggc
agctggtccaccttccgtagctctctgagtagtgactacgatccatttgtatattatggg
ccaggtcctgggcggggccctcggagaaacagcctagaggctgttgcgcaagcccggccc
aggtctctggattctgtggtgaacaaagcgggctgccctgaagaacagccacagactgtg
ttcagccacatccactaccaccgccacagacaccaccactatgaggagggggagcacagc
cagggcccgagcagaggctcggacgaggagcagggggcatctgctgctgcagcacctgct
gctcttgtcctggacaaagactcacctgtgtgccctcctaagcacagtccctgccagtgc
ccaaagccagaccccacggatcggcccagcccaggacagggagagcgtcatgaccatgac
cccagcagtcccacaggacctcctgtcctgatgtccccgatccccttacagcttcaaccc
cactgctgccaccagggacatggacgcccccccgctcctcttgggcgagttagtggctgt
gtgcttgatggcccctctgtccgcttccaccagagcctggatctgccggaggaccgtagc
atccacattcactacggccagggccaaggcttctgctgctctccccccgagctgcaccct
gctttgctcccagtgcccctcattctggactctggagggatggaggagtggccttgctgt
gccggggcccatgtcgtgtggcaaaaacgggtgcagcaggctcgctcagagcctcaactc
ctaggaccggggacttctatggacaggccaccctgcaggctccatcacggggctgccgct
gactgcaacacagacatttgtttatactgccaaacattacaccacaatcagggatcagaa
gaggagtccggtgtttga
DBGET
integrated database retrieval system
