Paralichthys olivaceus (Japanese flounder): 109628802
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Entry
109628802 CDS
T06037
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109628802 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109628802 (rabgef1)
Membrane trafficking [BR:
pov04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109628802 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
109628802 (rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Rep_N
CID_GANP
FANCI_S1
PIN_8
Motif
Other DBs
NCBI-GeneID:
109628802
NCBI-ProteinID:
XP_019941747
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MSQRTERRGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAEK
LQREEEAAYASSQGVQSQPHAQSTASHPGHVSLGPFSKFEEKKTNEKTRKVTTVKKFFSP
SSRTTSKKEAQEGKSPSPSISRQASFDTDQVSKDFVDFLKNLQKTGREIHKQCRAFIVNM
SSKKDLGADELSECVQDFYQNMADRLMSHFKGSSDSVEQVMDQVEKYIMTRLYKSVFCPE
TTDDEKKDLATQNRIRALHWVTIQMLCVSMDEEIPEVSENVVNAITDVIEMDSKRVPRDK
LACITRCSKHIFSAIRITKNEPASADDFLPALIYIVLKANPPRLQSNIQYITRFCNPSRL
MTGEDGYYFTNLCCAAAFIEKLDAQSLNLSPEEFERYMSGQASPRFSTSDGDWPHAGSAP
DVTATNPALAQLNHNLELLSGLSSKQEKLMEAAQSLQADLLAWPESVQREVHGILEKYPL
EILSCTVSAIDANNLDNDNLPPPLTPQVFAG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggacagagcgccgggggatacatgtggaccaatcagacctgctgtgcaaa
aagggatgtggttactacggcaacgcagcatggcagggtctgtgctccaagtgctggagg
gaggagtatcagcgggtacggcagaagcagatccaggacgactgggccttagcagaaaag
ttgcaacgggaggaggaggcagcgtatgccagcagtcaaggggtgcagtcccagccccac
gcccagtccacagcatcacacccaggacacgtctccctaggtcccttttccaagtttgag
gagaagaaaaccaatgagaagactcgaaaagtgaccactgttaagaagttcttcagccct
tcatcacgcaccacctccaagaaagaagcacaagagggcaaatcacccagcccgtcaatt
agccgccaagccagcttcgatacagaccaagtgtccaaggactttgtggactttttgaag
aatctccaaaagaccggcagggagatccataagcagtgtcgagccttcatagtcaacatg
tcgagcaagaaggatctcggtgccgatgaactttcagagtgcgttcaggatttctaccag
aacatggctgaccgcttgatgagtcactttaaaggctcttcagattctgtggagcaggtg
atggaccaagtggaaaagtacataatgactcgattgtataagagcgtgttctgtccagaa
accactgatgacgagaagaaggatctggccacacagaacaggataagggctttacactgg
gtgaccatacagatgctctgtgtgtccatggatgaagaaatccctgaagtctctgagaat
gtggtcaacgcaataacagatgtcatcgagatggactcgaagagggttcctcgggacaaa
cttgcgtgcattacacgctgcagtaaacacatcttcagcgccattaggatcaccaagaat
gagccggcctccgctgatgactttctccctgcgctcatttacatcgtgctcaaggcgaac
cctccgcgacttcagtccaacatccagtacatcactcgcttctgtaaccccagcaggctg
atgaccggagaggatggatattacttcaccaacttgtgctgtgcagcggccttcatcgag
aagttggacgctcagtctctcaacctctccccagaggaatttgagcgctacatgtcaggc
caagcttcaccacgattcagcacctcagacggcgactggccccacgctggctcggcacct
gacgtgaccgccaccaaccccgccctggctcagctcaatcacaatctggagctgctgtcg
ggcctcagcagcaagcaggagaagctgatggaggccgctcagagcctgcaggccgacctc
ctcgcctggcccgagagcgtgcaacgcgaggtgcacggcatcctggagaaataccctctg
gagattctgtcttgcacagtttctgccatcgatgccaacaacttggacaatgacaacctg
ccaccaccgctcacaccccaggtgtttgctgggtag
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