Paralichthys olivaceus (Japanese flounder): 109628864
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Entry
109628864 CDS
T06037
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174 isoform X1
KO
K25178
coiled-coil domain-containing protein 174
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109628864 (ccdc174)
03041 Spliceosome [BR:
pov03041
]
109628864 (ccdc174)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109628864 (ccdc174)
Spliceosome [BR:
pov03041
]
Complex C
Other components
EJC/TREX
109628864 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
109628864
NCBI-ProteinID:
XP_019941848
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDKKKKPFDVTASSLVDLKAELYRKQEQFKQDKLGQENAGAGSKSKSKEKKPNVWSKQNP
GVSARAEKDAEQLDEEQKSLDTSKRRLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKII
DKKRETFAQRDMLKEEDEERDSSTPIPAPGNPDEEWVDFVDALGRSRRCMKKDLPDFKKM
DHNLKGKGTASSEKTLLSEDMRRELQRQEWEREEEEAMKRPIGPIHYEDIRGQEARELGV
GYFAFSQDKEHRRKQRDTLDMLRDQTTEQRSKRERLKEKRQAILQARLAKVRQRKMKKTK
LDGTEEEDREEEKEADEDDSELIGSPPLPEDYPEVSTVKRVEVEIQERKDTKPGVPHVRE
WDRGKEFMFSEWKSRRRDERESDFAPPSAYFTDWKKQAPGKNKTQENKSKMSFKWSKGPG
EISESKEKPPQPETPPSPPQPQQKDPSASPPQNTSQPTPSQPHVVSAPLSAPHFSPQCPP
PPFYPPFPPPHPSQFAGPPHLPPHYPSQYPPQYPPQFPPQYVPQYPPQPQSQSQQPHEPS
HHSQAQQPPQGSSQSLDDMLSFYRNFT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaagaagaaaccattcgacgtgacggcttcttcgttagtggacctgaaagct
gaactgtacaggaagcaggaacaattcaaacaggacaaactcggacaagaaaatgctgga
gctggatctaaatctaaatccaaagagaagaaaccaaatgtctggagcaaacagaaccct
ggtgtttcagcgcgggctgagaaagatgcagagcagctggacgaggagcagaaaagtctt
gatacgtcaaagcgcaggttggaggagaaggccaaactctacgagcaaatgaccaaagga
gacttcccagatgaggagacagagggtctgttcctggtcgatttcacgcagaagattatt
gacaaaaagagagaaacatttgcacagagggacatgttgaaagaggaagatgaagagaga
gacagctcgacacctatacctgctcctggaaacccagatgaggaatgggtggacttcgtc
gatgctttgggccgatctcgaagatgcatgaagaaagacctgccagattttaagaaaatg
gaccataacctaaaaggaaaagggacagcctcatctgagaagactttactctcagaggac
atgcgccgagagctgcagaggcaggagtgggagagggaggaagaggaggctatgaagagg
cctattggaccgatccactacgaggatatccgaggacaagaggcacgagagcttggtgtt
ggatactttgcgttttctcaggataaagagcatcgcagaaagcagagagacactctggac
atgctcagagaccagacaacagaacagcgtagtaaaagagaacgactgaaggagaagaga
caggccatcctgcaggccagattggccaaggtaaggcagaggaagatgaagaagaccaag
cttgatggcactgaagaagaagacagagaggaggagaaagaagcagatgaagatgatagt
gaattgatcggctccccgcctctaccagaggactatcctgaggtcagtactgtgaagagg
gtggaagttgagatccaggaaaggaaggacactaaaccaggagttcctcatgtcagagag
tgggacagaggcaaagagtttatgtttagcgaatggaaaagccggcgccgggatgagcga
gagtcagactttgctcctccctctgcatatttcactgattggaaaaaacaagccccagga
aagaataaaactcaggagaataaatccaaaatgtctttcaagtggtcaaagggccctgga
gaaatctctgagagtaaagaaaaaccacctcagcctgaaacacctccttcacccccccaa
cctcaacaaaaagatccatctgcttctccgccacagaacacgtcccagccaacaccctca
cagccccacgttgtttcagcccctttgtctgctcctcatttcagtccccagtgtccacct
cctccattttatcccccatttcctcctcctcatccttcccagtttgcaggtccacctcac
ttacctcctcactatccctcccagtatccaccccagtatcctcctcaatttccaccccag
tatgtcccccagtatccacctcagccgcagagccagtctcagcagccccacgagccctca
caccacagccaggctcagcagccccctcagggttcttctcagagtctggatgacatgttg
tccttctacaggaactttacctga
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