Paralichthys olivaceus (Japanese flounder): 109629148
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Entry
109629148 CDS
T06037
Symbol
hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03083
Polycomb repressive complex
pov04980
Cobalamin transport and metabolism
pov05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109629148 (hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
109629148 (hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109629148 (hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pov01009
]
109629148 (hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pov03036
]
109629148 (hcfc1)
03029 Mitochondrial biogenesis [BR:
pov03029
]
109629148 (hcfc1)
Protein phosphatases and associated proteins [BR:
pov01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109629148 (hcfc1)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
109629148 (hcfc1)
HMT complexes
COMPASS/SET1 complex
109629148 (hcfc1)
MLL-HCF complex
109629148 (hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109629148 (hcfc1)
Mitochondrial biogenesis [BR:
pov03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109629148 (hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_4
Kelch_1
fn3
Motif
Other DBs
NCBI-GeneID:
109629148
NCBI-ProteinID:
XP_019942194
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MSAPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPAMSATPSQ
PVNSPKSPALAVAAPSAQSLPQTAILKVAAQQSATGTSVVTVRPSQPGKSPVTVTSLPPG
VRMVVPAQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSAGTVLNVPAGATILKTVAVS
PGTATVKMASPVMVSNPATRMLKTAAAQLSTATASSPTTTRPIITVHKSGAVTVAQQAQV
VTTVVGGVTKTITLVKSPLTMGGSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQL
IQTKGTLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGVSPTTTKQGTTIIK
TIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLATAAGQQGLTQ
VVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGT
VSSSLAGATVDSSNASLVTPITTLGTIATLSSQVISPAAITVSAAQTSLTSASTLPSSTI
TVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGAAGDGSGTVTLVCSN
PPCETHETGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATMGARQVCSNPP
CETHETGTTNTATTASSNMSAPRVCSNPPCETHETGTTNTATTASANMGGSQQVCSNPPC
ETHVTGTTNTSTQASSNINAGQTSTVQRVCSNPPCETHETGTTNTPSTATSSMGGDQTNT
ATGTVQRVCSNPPCETHETGTTNTATTATCSMETGEGTAAQQTEEGTEGTSSTEVASTTA
ATGMAAAAATTTTTTQGRAITTVTQSTQVPGPSVPSISSITEGVSTAASSTEEPMQTNEA
ASAEAAPAEEGATAMETQAEGEAAATDLNLPSELMSEGQGATLMVTGLSDEELAVTAAAE
AAAQAAATEEAQALAIQAVLQAAHQAVMNEGDSAGESQQPTNIPIMLTQQELAALVQQQQ
QLQEAQAAAQQATVDASLPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAE
TLAPSSTFAPSVSVASPAKLQAAAALAEVANGIEGEKQAPQPTPVKPVVKKENQWFDVGI
VKVTNMVVTHFYVPTDDSHGDDDSGIMPDYSQMKKMELQPGTAYKFRVAGINACGRGAFS
EISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAK
ASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRW
LQESGKDAASAKPAPKRPGTSPDTKATGPKKARTDQ
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggctccgcggtgtctgggaccacggcgtcggttctgcagccgcggtgg
aaacgggtcctcggatggtccggtccagtcccccggcccagacatggacacagagctgtg
gccataaaggagcttatggttgtctttggtggtggaaacgaagggatcgtggatgaattg
catgtatacaacaccgcaacaaaccagtggtttatcccagcagtccgtggtgatatcccc
cctggttgtgctgcgtacggttttgtgtgcgatggcacgaggttgctggtgtttggtgga
atggtggagtatggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa
tggaaaaaattgaaagcaaaaaacccgaagaatgggccccctccttgtcctcgtcttggc
cacagtttttccctggtgggcaacaagtgctacctgtttggtggattggccaatgacagc
gaggacccaaaaaacaacattcccagatatctaaatgatctgtacacactggagcttcgt
gctggttccagtgtggttggatgggatattccaatcacctacggagttttgccacctccc
cgtgagagccacactgctgtggtttacacagaaaagacgagcaggaaatctcgcctcata
atctatggagggatgagcggatgtcgtcttggagatctgtggacacttgatattgatacc
ctgacatggaacaaaccatcagtaagcggcacagcgccacttcccagaagtcttcactcc
gccaccaccatcacaaacaagatgtatgtttttggaggatgggttcctctggtgatggat
gatgtcaaagtggccacacatgagaaagagtggaagtgcacaaacactctagcctgccta
aatctagattccatgtgttgggagaccgtgttgatggatactcttgaagacaatatcccc
agagcccgtgctggccactgtgctgtggctatcaattccagactttatgtttggagtggc
cgtgatggttatcgtaaagcttggaacaaccaagtctgctgtaaagacctctggtacctg
gaaacagagcggccacatgcccctgccagggtgcagttagtccgtgccaacacaaactcc
ctggaggtgagctggggtgcagtctccactgctgacacctacttattgcagctacagaag
tatgacatcccagcaactccagctgcagcctcacctgccatgagcgcaaccccttctcag
cctgtgaactctccaaagagccctgccctggctgtagcagcaccctctgctcagagcctg
ccacagacagctattttgaaagttgcagcccagcaatctgcaacaggcacatctgttgtc
acagtccgccccagccagcctgggaaatcccctgtcactgtgacatcgcttcctccaggt
gtccgaatggtagtgcccgcgcagaccacccaaggatcgccaatcggcagtagtcctcag
atgagtggcatggcagctttagctgcagcagctgcagcaacacagaagatccctccctct
gcaggcaccgtactcaatgttcctgcgggggccaccattctcaaaacagtagccgtttcc
cctggcacagccacagtgaaaatggcctctcccgtaatggtcagtaacccggccacccgg
atgctgaagactgctgcagctcagctcagcacagcaactgcatcctctcccaccaccacc
cgacccattatcactgtgcacaagtctggtgcagtcacagtggcccagcaggcccaggtg
gtaaccactgttgtgggaggagtcactaagaccatcaccctggtcaagagtcccctcacc
atgggaggcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaaacc
aaaccagtgcagacatcagctgtcactggccaggcttccacgaaccctctcacacagctc
atacagacaaagggtaccctcccagcgggcaccatcctgaagcttgtgacctctgctgac
ggcaagcccacaaccatcatcaccacttcccaggcaggaggcacaggaaacaagcccacg
atcctcaacattagcggcgtctctcccaccaccaccaagcagggcaccaccatcattaag
actatccccatgtcggccatcatgacccagcccggagccacaggcgtgacaagcagtgca
ggcatgaaaacgcctatcacaattctgaccacgaaggtgatgaccactggaactcccggt
aaaatcatcactgcagtgcccaaacttgctactgcagccggtcagcagggactgacacag
gtggttttgaagggggctcccggacaaccaggaaccattctgcgtactgtgcccatgagc
acagtgggtggtgttcgacttgttacacctgtgacagtatctgctgtgaagcccactgtc
actactctggttgtgaaggggactactggtgtcaccactcttggaacagtcactggcact
gtctccagcagcctggcaggagctacggtggacagttccaacgcctctctagtcaccccc
atcaccacgctaggaaccatcgcgaccctgtccagccaggtcatcagcccagctgccata
actgtgtcagctgctcagaccagcctgacctctgcctccactctgccctcctctaccatc
acagtgcagaaccagccaacccaggtgactttaatcacaactcccagtggagtagaagct
caaccggtgcaggatctaccagtttccatcctggcttcaccaacctcggagcagcccagt
tccactgaggctggagcagctggagacggatctgggactgtcacccttgtctgctccaac
ccaccctgtgaaacccacgagaccggaaccaccaacacagccaccacttcctctgccaca
atcggagctggacaagtctgttccaacccaccttgcgagacccatgaaaccggaacgacc
aacacagctaccacctcctctgctacaatgggagccaggcaggtctgttctaacccacca
tgtgagacccatgaaacgggaaccaccaacacagccacaactgcatcctcaaacatgtct
gcgcctcgtgtgtgctccaacccaccatgcgagactcacgaaactgggacaactaacaca
gctaccacagcatccgctaacatgggtgggtcccagcaggtttgctccaatccaccctgt
gagacccacgtgacaggaaccaccaacacatccactcaggcatcgtctaacattaacgca
ggccagacgagcaccgtgcagagggtgtgctccaacccgccctgcgaaacccatgagaca
gggaccaccaacaccccgtccacagcaacctccagtatgggaggtgaccagaccaacaca
gcaacagggacggtccagagggtgtgctccaacccaccctgtgaaacacacgagaccggg
actaccaacacagccaccactgccacctgcagcatggagacaggcgaaggcacagcagcc
cagcagacagaggaaggaactgaaggtaccagcagcacagaagtggcctctaccactgca
gcaacaggcatggccgccgccgccgctaccaccaccaccaccacccagggcagggccatc
actactgtcactcagtctacacaagtcccagggccctctgtaccatcaatttcatcaatc
acagagggtgtgagtactgctgccagctctacagaggaaccaatgcaaactaatgaggca
gcatcagcagaagctgcaccagcagaggagggagctaccgctatggagacacaggcagaa
ggagaagcagccgcgacagatttgaacctgccctcggagctgatgtctgagggtcaggga
gctacactcatggtgacagggctgtcggatgaggagctggctgtgaccgcagcagcagag
gccgctgctcaggcagcagccactgaagaagcccaggcccttgctatccaggctgtcctc
caggcagctcaccaagctgtaatgaatgagggtgattccgctggagagagccagcagccc
accaacatccccatcatgctgacccagcaggagctcgcagctctggtacaacagcagcag
cagctgcaggaggctcaggctgcagcccagcaggccaccgttgatgcaagcttacctact
gaaggcctcgcccctgctgacagcctcaacgacccctctgtcgagagcaacggacacaac
gagatggctgccgcggtcaccagtgctgtggcatctctactgccacgcaccactgctgag
acacttgctccatcaagtacctttgcaccctctgtatcggtggcaagtccagccaagctg
caagcagcagcggctctagcagaagtcgccaatggcatagagggagagaagcaagcccct
cagccaaccccagtgaaaccagttgtaaagaaagagaatcagtggtttgatgttggaatc
gtaaaagtgacaaatatggttgtcacccacttctatgtgccaacagatgattctcatgga
gatgatgactctggcatcatgccagactacagccagatgaagaaaatggagttgcagcct
ggaacagcttataagttccgcgttgctggaatcaacgcttgcggtcgcggagcattctca
gagatttcagctttcaagacttgcttaccaggcttcccaggggccccttgcgccatcaaa
atcagcaagagcccagatggtgcccacctgacctgggagccaccttcggtgacatcaggg
aagatcatcgaatactctgtgtaccttgccatccagagcaaccagacagctgaagccaag
gcctccaccccagcccagctagccttcatgcgggtgtactgtggacccaacccgtcgtgc
ttggtgcagtcgtccagcctctccaacgcccacatcgattacaccaccaagcctgccatc
atcttccgcatcgccgcccgcaacgagaagggctatggtcctgccacccaagttcgatgg
ctgcaagaatctggcaaagacgctgcctcagcaaaaccggcccccaaaagaccaggcacc
tctcctgatactaaggctactggtccaaagaaagcaaggacggaccagtga
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integrated database retrieval system
