Paralichthys olivaceus (Japanese flounder): 109629153
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Entry
109629153 CDS
T06037
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109629153
03015 mRNA surveillance pathway
109629153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109629153
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109629153
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109629153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
109629153
NCBI-ProteinID:
XP_019942206
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGNLHIKEKPEENGTTANATDSSTAAAKSEGEGENKSTDDD
DKDDKAAQSLLNKLIRSNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRYPQCLCVSPT
YELALQTGKVIEQMGKHYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCSKFKFI
DPKKIMVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNCKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQDHFNKKIEKLDTDDL
DEIEKIAG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcccaggcggtggacgaacaagaagccgcggcagaatcgatc
ggtaaccttcatattaaagagaaaccagaagaaaatggcaccactgcaaacgcaacagac
tcgagcactgcagctgcgaagtcagaaggtgaaggagagaacaagtcaacagacgacgat
gacaaagatgacaaagcagcacaatcgttgttgaacaagctgatcaggagtaatcttgtc
aacaatacaaatcaagtggaagttcttcagaaagatccgaactctccactctactctgtc
aagtcttttgaggagttgcgtctcaaacctcagctgcttcagggcgtgtacggcatgggt
ttcaatcggccatctaaaatccaggaaactgccttacctatgatgctggctgaacctcca
cagaatctcattgcccagtcgcagtcgggaacagggaaaacagctgcctttgtcctggcc
atgctcagtcatgtcgacccaaacaacagatatccccagtgcctgtgtgtgtcaccaacc
tatgaactggcccttcagactggtaaggtgattgagcagatgggcaaacattatcctgag
gtcaaactggtctacgccatcagaggaaataaattgcagcgtggcatgaagttgcaggaa
cagatagttattggcacacctggtacgatgctggactggtgcagtaagttcaagtttata
gaccccaagaagatcatggtgtttgtgctggacgaggctgacgtcatgatcgccacacag
ggtcaccaggaccagagtatccgcatacagaggatgctgcctaaaaactgccaaatgttg
ctgttttcagccacatttgaagaaacagtgtggaatttcgcccagcgcattgtgcctgac
cccaatatcatcaaactgaagagagaggaggagacgctggacaccatcaaacagtactat
gtgttgtgcaactgcaaagaagagaagttccaagccctctgtaacatctacggagccatc
actattgcccaggccatgatcttctgccatactaggaagactgctggctggctggcaggc
gagctgtctagagaaggccaccaggtggcgctgctcagtggggaaatgcaggttgagcag
agggctgctgtcattgatcgcttcagggatggcaaggagaaggtcctggttacaactaac
gtttgtgctcgaggcattgatgtagagcaggtttctgtggtgatcaactttgacttacca
gtggacaaggacggtaacccagacaacgagacctacttgcacaggattggccgcacaggt
cgatttggcaaacggggactggcgatcaacatggtggacagcaagatgagcatgaacatc
ctcaacaggatccaggaccatttcaataaaaaaattgaaaaactagacacagacgatctg
gatgaaattgagaaaatcgctggctaa
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