Paralichthys olivaceus (Japanese flounder): 109629596
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Entry
109629596 CDS
T06037
Symbol
trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pov04040
]
109629596 (trpa1)
Ion channels [BR:
pov04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109629596 (trpa1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
DUF3195
Motif
Other DBs
NCBI-GeneID:
109629596
NCBI-ProteinID:
XP_019942914
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MNLNREVTRQNSSYSYVIEEDDPALASRNVFELAVKGELALLQNLVRKSPKVLSERDEYG
ASTLHHAAAGGHVTLIQFITTVIDSQGKHASVIDHKVHSSTELNSCDEQGNVPLHWAVEQ
NKAESCRALMDLGANPNILNTALLSPLHLAVNRGHNNLVELLVSYSATDCNLEGDLGNNP
VILASSINNCEALSILLKHGGRLCQQNKLGHFPIHAAAFAGAKKAMEVILKAGEELGHST
VVHINYLDKSKSSPLHLAVRGGNIEAIRLCIATGARVDQQQNDRSTPLHFACTQGATEVV
KLMLSSFDQVEDIINLTDGACQTPLHRATIFDHTELVEYLISLGADLNSTDCKGKSPLLL
ATSCGAWRTVSLLLSKGANVNATDRCGCNFLHLAILQPKGLKNLPQEVLQHNSVKALLSR
EDNDGCTPLHYACRLGIHDSVKNMLGLSGQVGLACKSKDKKSALHFAAEYGRINTCQRLL
ETITDSRLLNEGDGQGLTPLHLASRGGHIKVVQLLLCKGALFQSDYKGWSSLHHAASEGY
TQTMDILLSTNPKLLDKTDDNGNTALHIAAKEGHVAAVRMMLARGAELILNKNDTSFLHE
ALQNGKKDVVNAVIDSDRCAEALIMFAPGTSQRCPILDMIEFLPETYKYLLDGCVKESDN
DYNSPDYHIEYNFRWLQAPLTAKKHVDNSVRCKPLAALNAMVQYNRLELLEHPVSKKYLA
MKWLAYGSKAHLLNMFVYLLGLLPLTQLIVTLRPSMNTTSTGEQIILMVPVSFKEQSVYL
SFCMVMVVAMNIYCIVKEVVQISQQRWNYLKDSSNHSDWFSAIFSLLFIIPIMVNMEGSL
HWQAGALAVLNSWIGFLLYLQRFEGVGIYVVMFGEILKTLVRIVMLFIFLVCAFGLAFHA
LMLNQKEFDSVELSVMQTFVMMVGELNYQNNFLEAYMNNELPFGPLTYLIFVQFVLLMPI
LLMNLMIGLAVGDIAEVQRNAVLKRIAMQIELHTALEDKLPYWFMKRVDKPSITIYPNRK
CSRRYIQQLFIGSEESVEVSSRVQAKSQSCTMIENELRKQKSRMKEMSSLLEKQYSLLKL
VIQKMEITTEADENDGPTNVKASRWPSLSRSGPRGHTVSRWVPLMKAIECDRK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaacagggaggtgacccgacagaacagctcgtattcgtatgtgatagaagaa
gacgatccagccctggcaagccgaaacgtatttgagttggccgtgaagggtgagctcgct
ctcctgcagaacctggtgaggaagagcccaaaggtcctgagtgagagagatgaatacgga
gcgagtacccttcatcacgctgccgcagggggccacgtcaccctcatccaattcatcacc
actgtcatagactcacagggtaagcatgcctcagtcatcgatcataaggtgcactccagc
acagagctgaacagctgtgatgagcagggcaacgtgcccctacactgggcagtggagcag
aacaaggcggagagctgcagggctcttatggacctgggggccaaccccaacatcctcaac
acagccctcctgtcccctctgcacctggctgtcaaccgtggacacaacaacctggtggag
ctgctggtgtcttacagtgccacagactgtaatctggagggagaccttgggaacaaccca
gtgatactggccagctctatcaataactgtgaggctctaagcatattgttaaagcatgga
gggcggctctgccaacagaacaagctcgggcattttcctatccacgcagctgccttcgca
ggtgcaaagaaagccatggaagtgatcctgaaggccggagaggagttgggtcactcaact
gttgttcacatcaactatttagacaagtcaaagagtagtcccctccatctggctgttcgt
ggtgggaatattgaagccatccgcctctgcattgccactggggccagagttgaccagcaa
cagaatgacaggtccacaccgctgcactttgcctgtacccagggtgcgactgaggtagtc
aaactgatgctctcctcattcgaccaagtggaagacatcatcaatctaactgatggggca
tgtcagacccctctgcacagggcaacaatatttgaccacacagagctggtggagtaccta
atttctttgggtgcagacctaaacagcactgattgtaaaggaaaatctcctttgctgctg
gccacgagctgtggagcatggagaactgtgtctctgctgctgtcaaaaggggcaaatgta
aatgcgacagacagatgcggttgtaacttcctccacctggccattctgcagcctaagggt
ctgaagaatcttccgcaagaagtactgcagcacaacagtgtgaaggcgctgctgagcagg
gaggacaacgacggctgcaccccgctccactacgcttgcagactgggtatccatgactca
gtaaagaacatgctgggcctctcggggcaggtcggcctcgcatgcaagtccaaggacaag
aagtctgccttgcactttgctgccgagtatggccgcatcaatacatgtcaacgattactg
gagaccatcacagactctcgtttgctgaatgaaggtgacggtcaaggcctgactccgctt
catttggcttcaagagggggacacatcaaggtggtgcagttgcttctgtgtaaaggagct
ctctttcagagtgattataagggttggagcagtctgcaccatgctgcatctgaaggatac
acacaaactatggacatcctcctgtcaaccaatcccaagttactggataaaacagatgac
aacgggaacactgcactgcacatcgcagcaaaagagggacatgtggctgcagtgaggatg
atgctggctcggggagcggagctcatcttaaacaagaacgacacttcgttcctgcatgaa
gcgcttcaaaatggcaagaaagatgtggtcaatgcggtaatcgacagtgacagatgtgct
gaggcattaataatgtttgcacctggcacaagtcagagatgtcccatactagacatgatt
gagttcctgcctgagacctacaagtacctgttggacggctgtgttaaggaatctgacaat
gactacaacagtcctgactaccacattgaatataatttcagatggcttcaagctcccctc
acagcaaagaagcatgttgacaattccgtgaggtgcaaaccactggctgcactcaatgcg
atggtgcagtacaaccggctcgagcttctcgaacaccctgtcagcaaaaagtacctggcg
atgaagtggcttgcatatgggagcaaggctcatttgctcaacatgtttgtgtacctgtta
ggcctgctgcccctcactcaactgatagtgactctgaggcccagcatgaacaccactagc
acaggggagcaaattatcctcatggtgcctgtttctttcaaagagcaaagtgtgtatctg
tccttctgtatggtgatggtcgtggccatgaacatctactgcatcgtgaaggaagtggtg
cagatatcacaacagcgctggaattacttgaaagattcgtccaaccacagcgactggttt
tcagccatcttctctctgttgttcataatccccatcatggtcaacatggaaggttcttta
cactggcaagcaggggcgctagctgtcttaaactcatggattggatttctcctttatctc
cagaggtttgagggcgttggaatctatgttgtgatgtttggagagatcctgaagacgctg
gtccgcatcgtgatgttgttcatatttctggtgtgcgcttttggactagcattccatgca
ctgatgctcaaccagaaagagtttgacagcgtggagctctcagtgatgcagacctttgtg
atgatggtcggggagctgaactaccaaaacaactttctggaagcttacatgaacaacgag
cttcccttcggtccgctgacttacttaatttttgtgcaatttgtgctgctcatgcccata
ctgctgatgaacctgatgattggtttagcagttggagacatcgctgaagtacaaagaaat
gctgtcttgaaaagaatagccatgcagattgaactccacactgctctggaagataagctc
ccttactggttcatgaaacgagtcgacaaaccctccataaccatctaccccaaccgcaag
tgctccaggcgctatatacagcagttgtttataggcagtgaggagtcagttgaagtttcg
agtcgtgtgcaggccaagtcacagagctgcaccatgatcgagaacgagctaaggaagcag
aagagcaggatgaaagagatgtcgagcctgctggagaagcagtacagcctcctgaagctc
gtcatccagaagatggagatcaccacggaggctgacgagaacgacggccccacgaacgtc
aaagccagcaggtggccgagtctgagtcggtctgggccgagaggacacaccgtgtctcgc
tgggtcccgctgatgaaggccattgagtgtgatagaaaataa
DBGET
integrated database retrieval system
