Paralichthys olivaceus (Japanese flounder): 109629602
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Entry
109629602 CDS
T06037
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109629602 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109629602 (u2surp)
Spliceosome [BR:
pov03041
]
Complex A
U2 snRNP components
U2 related factors
109629602 (u2surp)
Complex B
109629602 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
109629602
NCBI-ProteinID:
XP_019942922
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MADRAPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGADGKVKAFVRGGIANATKEEAATDEKKGKLYKPKSRFESQSKSFLPLETPPQ
FLALDKRHPVKKTTEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFEPLAGGDGRR
SSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASV
KIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPI
YIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEEFEKTLSQAIVKVVIPT
ERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKLYSILQG
EAPAKWRTDDFRMFKNGSFWHPPPLNPYLHGPYDDGEEEEDEEEGGRKGCLKEDERDKLE
EMLRGMTPRRGDISEAMLFCLSRAEAAEEIVECITESLSILKTPLPKKIARLYLVSDVLY
NSSAKVANASYYRKYFETKLCQIFSDLNATYKSIQGHLQSENFKQRVMSCFRAWEDWAVY
PDPFLIKLQNIFLGLVNLTAEKEPPCVVVEVEPPEDIDGAPIGEYVDGSPLEDVDGVPID
GGAIDGAPIDGAPLDDLDGVPIKPMEEDIDGIPFDQCKEAAFKVAPSKWEAVDESELASQ
AVTTSKWEAFEQPEQTKKDEDDSDEDNRSPRSDENQSYSNPMRDESDTKTKISEMNEEKR
TKLREIEVKVMKFQDELELGKRPKKSGQSIQEQVEHYRDKLLQKEKEKEKLEREKEREKK
EKEKAEARLKDLKKEKEKEDTPTRKERKRRHSGSPSPTRTSSRRGRSSSPRSERSERSER
SDRSFSKDTSSRSTHKDSPRSSNKKSSKRSPSLPRTPKRSRRSRSKTPKKSAKKSRSKSR
SPHRSHKKSKKSKH
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgagcgcctggcggctctcagaaagctagcgctaaggcgctgctcgagagc
aaactgaagtctttcagcatcggcaagatggcagtggccaagaggacgctgagtaagaag
gagcaggatgaaatcaagaaaaaggaggacgagcgtgcagcggcggagatttatgaggag
tttctcgctgcttttgaaggaggagcagatggcaaagtgaaggcctttgtccgaggtggt
atcgcaaatgcaacaaaagaagaagcagctactgatgagaagaaagggaagttgtacaag
cccaagtcacgttttgagtctcaatcaaaaagcttcttgcccttggaaaccccacctcag
tttttagcattagacaaaagacatcctgtaaagaagactactgaaaaggagaagaagaag
agcaacttggaacttttcaaggaagaattgaaacaaatacaagaggaaagggatgaaaga
cacaagctgaagggacgtgttagtcgtttcgagcctctcgcgggcggggacggaagacgc
tcgtcggatggttcttcaagaagaaaccgtccgtccagtgttttggatgattgtgcgcca
ggttcccatgacgtcggagacccatccactactaacctgtatctcggaaacatcaatcca
cagatgaatgaagagatgctgtgtcaagagtttggcagatatggcccgctggccagtgtg
aagatcatgtggccgaggacggacgaagaaagggctcgggagaggaactgtggctttgtg
gccttcatgaacaggagggatgctgagcgagcactcaagaacctcaacggaaagatgata
atgaactttgagatgaaattagggtggggcaaaggtgtgcccattccaccccatcccatt
tacatccctccttccatgatggagcacacactcccaccacctccctccggccttcccttc
aacgcacagccccgggagaggctaaagaaccccaatgctcccatgcttcctccacccaaa
aacaaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgaaggccca
atgtttgaagccatgatcatgaacagagaaatcaacaatcccatgtacaggtttcttttt
gagaaccagagcccggcacacgtatactacagatggaagctgtactccatactacagggt
gaagctccagccaaatggcgaaccgatgacttcaggatgtttaaaaatggctctttctgg
catccgcctcctcttaatccatacctccatggtccttatgatgatggggaggaagaagag
gatgaggaggagggcggcaggaaaggctgcttgaaagaagacgagcgggacaaactagag
gagatgcttcgtggtatgactccaaggagaggagacatctcagaggccatgctgttttgt
ctcagtcgcgctgaagctgctgaagagatcgtggagtgtatcacagagtctctctccatt
ctaaagacccctcttcccaagaagattgcgaggttatatcttgtttctgatgtgctgtat
aactcttctgccaaagtagccaatgcctcttactacagaaaatactttgagacaaaactc
tgccagattttctcagacctcaatgcaacatacaaatcaatacagggccaccttcagagt
gagaacttcaagcaacgagtaatgtcgtgtttccgggcgtgggaagactgggctgtgtat
cccgacccgttcctcatcaagttgcagaacatctttctgggtctagttaatctcacggca
gagaaggaacctccttgcgtcgttgtggaggttgagccaccagaggacattgacggggct
cccataggcgagtatgtagatgggagtccactggaggatgtggatggagtgccaattgat
ggaggggccattgacggagcacctattgatggagcacccctggatgacctagatggagtt
cctatcaaacccatggaagaagacatagatggaatccctttcgatcagtgtaaagaagca
gccttcaaggtagcgccttcaaaatgggaagcagtggacgagtcagagttagcatctcaa
gctgtgacaacctcaaaatgggaggcatttgagcagccagaacaaacaaaaaaagatgag
gacgacagtgatgaagacaaccggagccctcgctcagacgaaaatcagagctactccaat
cccatgagagacgagtcggatactaagaccaagatttctgaaatgaatgaagagaaacgc
accaagctcagagagatagaggttaaggtcatgaagttccaggatgagctggagttgggg
aaaaggccaaagaagtctggtcagagcattcaggagcaggtggagcattacagggacaaa
ctactacaaaaggaaaaagaaaaggagaaacttgagcgggaaaaagagcgagagaagaaa
gagaaggagaaagctgaggcacggttaaaagacttgaagaaggaaaaagagaaggaggac
acgccaaccaggaaagagaggaagcgacgtcacagtggctcacccagcccaacacggacc
agtagcagacgagggcgctcgtcctcgcctcgttcagagcggtcggaaagatcagaacgt
tccgaccgatcattctctaaagacacatcctcccgctctacccataaagattcccctcga
tccagcaacaaaaagtcctccaagagatctccttcattacctcgcacacccaaacgatcc
cggcggtcgcgctccaagacgcccaagaaatcagcaaagaagtctcgctccaaatcacgg
tctcctcacaggtctcacaaaaaatcaaagaagagcaaacactga
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