Paralichthys olivaceus (Japanese flounder): 109629780
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Entry
109629780 CDS
T06037
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109629780 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109629780 (smarcd3)
03036 Chromosome and associated proteins [BR:
pov03036
]
109629780 (smarcd3)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109629780 (smarcd3)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109629780 (smarcd3)
PBAF complex
109629780 (smarcd3)
GBAF(ncBAF) complex
109629780 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
TFIIA
Motif
Other DBs
NCBI-GeneID:
109629780
NCBI-ProteinID:
XP_019943240
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQNQQQQQQSVQNRARKKPVGFPGANEMPARQMDMRE
PQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEAL
KRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFFK
SLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKLD
PRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIP
QRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEIA
SLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERR
AAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccagggt
gctcccatgggcccccccggcccaccgtacggagggagccccgctgtgcggcccggccta
ccctccccggtgatggagcccagtcgcaagaggcccgccccctcccagcaggtccagcag
cagcagcagcagcagaatcagcagcagcagcagcagtccgtccagaaccgggccagaaag
aagccggtcggattccctggagccaatgagatgccggcgaggcagatggacatgagagag
ccccaatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaagatt
cttccgcaaaggatccgtgagctggtgccggagtctcaggcctacatggacctgctggcc
ttcgagcgcaagctggaccagaccatcatgcgcaaacgtgtggacatccaggaggcgctg
aagagaccaatgaagcagcaaaagcgtaaactgaggctttacatatccaacaccttcaac
cccgccagacccgacgccgatgactctgacggcagcattgcgtcatgggagctgcgagta
gaagggaagttgcttgacgatccggggaaacagaagaagaagttctcttcgttttttaag
agcctggtgatcgagctggacaaagacctgtacggtcctgacaaccacttagtcgagtgg
caccgcacacccaccacccaggagacggatggcttccaggtgaagaggcccggagacgtg
agcgtgcgctgcactctgctgctgatgcttgactaccagccaccgcagttcaagctggac
cctcgcctggctcgcctgctcggcattcacactcagactcgctcctgcatcatccaggct
ctgtggcagtacgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaac
tgtgacaagtacttccaacagatttttgactgcccgcggctgaagttctcagagatccct
cagcgtctcaccaacctccttctgcccccggaccccatcgtcatcaaccacgttatcagc
gtggaccccaatgaccagaagaagacggcatgctacgacattgatgtggaagtggaggac
cccctgaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaaatcgcc
tcactcgacaacaagattcacgagaccatcgagtccatcaaccagctgaagatccagagg
gacttcatgctcagtttctccagagatcccaagggctacatccaggactggctcaaatct
cagagcagggacttaaagttaatgacagacgtggtggggaaccctgaggaggagaggagg
gctgcgttttaccacgagccttggtctcaggaggccgtcagccgctatttctactgcaag
atccagcagaggaggcaggagctggaacaggccttagctgtccgcaacacctaa
DBGET
integrated database retrieval system
