Paralichthys olivaceus (Japanese flounder): 109629812
Help
Entry
109629812 CDS
T06037
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04140
Autophagy - animal
pov04148
Efferocytosis
pov05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109629812 (vps41)
04148 Efferocytosis
109629812 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109629812 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109629812 (vps41)
Membrane trafficking [BR:
pov04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
109629812 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_RIG_2nd
zf_RING_Vps8_fungal
Vps39_1
Beta-prop_EML_2
WD40_Prp19
Beta-prop_HPS5
TPR_7
WD40_WDHD1_1st
TPR_19
zf_RING_Vps8
TPR_17
TPR_PEP5_VPS11
Beta-prop_IFT140_2nd
zf-Vps39_C
TPR_GEMI5
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
109629812
NCBI-ProteinID:
XP_019943297
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MAEVEEGRKPSEEFTDESEEEDSEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALG
THFGKVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFHE
NFDCPIKVVAVHPQFTRSNYKQFVTGGNKLLLYERNWLNRWKTSLLHEGEGHITNIQWRS
NLIAWANNVGVKIYDISTKQRITNVLRDNIKLRPDMYPCSLCWKDNTTLIVGWGASIKIC
VVKERNPTEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLFFVKENSDQMDEEFRAR
PRLDIIQPLPESCEEISSDALTVRNFQDNECRDYRLEHSEGESLFYIISPKDIVVAKERD
QDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMSYINHLVEKGDYDTAARKCQKV
LGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLRTDYEGFATLIR
EWPGELYNNMAIVQAVTDHLKRDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVYQ
LIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELADRPELLHVYLHKS
FKRDHHKGQKYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQERNFVEETVFLLS
RMGNCRRALQMIMEELEDVDKAIDFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTHV
DPILLIYRIKEGMEIPNLRDSLVKILQDYNLQIMLREGCKKILVADSLSLLQKMHRTQMR
GVRVDEENICESCHATILPSDMAKPFSVVVFHCRHMFHKECLPSPGTIHGVQFCNICSAK
RRGPGSGIHEMKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaggagggaagaaaaccaagtgaggagttcacagatgagtctgaggag
gaggacagcgaggaggagcccaagctgaagtatgagaggctctccaatggggtgaccgag
atcctccaaaaggatgcagccagctgtatgaccgtccacgacaagtttcttgccctcggt
acacattttggaaaggtcttcctgctggacatccaaggaaatgtaactcagaagtttgaa
attagttcagtgaagatcaaccagatcagtctggatgaaagtggagagcatgtgggcatc
tgctccgaggacggaaaggttcaagtgttcggcctctatacaagagagggcttccacgag
aacttcgactgtcccatcaaagtggtagctgtacaccctcagttcaccagatcaaactat
aaacagtttgtcactgggggcaacaagcttcttctgtatgaaagaaactggttgaatcgc
tggaagacgtcgctcctacatgaaggggaaggccacataactaacattcagtggagatcg
aacctcattgcctgggcaaacaacgtgggagttaaaatctatgacatcagcacgaaacaa
cggatcaccaatgtgctgcgggataacatcaaactgaggcctgacatgtacccgtgcagc
ctgtgttggaaggacaacaccactctcattgtcggctggggggcgtccattaagatttgt
gtcgtaaaagagcgaaatcccactgagatgagagatctgcccagccgctatgtggaaata
gtgtctgcattcgagacagaatttttcatcagtggcctggctcctctggcagatcagctg
gtcacccttttctttgtgaaggagaactcggatcagatggatgaggagttccgtgcccgg
cctcgtctcgacattatccagcctctccctgagagctgtgaggagatctcctcagacgcg
ctgacagtgcgcaacttccaagacaatgagtgcagagactatcgcctcgagcattcagag
ggagagtcgctcttctacatcattagtcccaaagatatcgttgtggccaaagagcgagac
caggacgaccatatcgattggctccttgaaaagaagaaatatgaggaggcactgatggct
gcggagatcagcttcaagaacattaagagacatgacgttcagaaaatcgggatgtcttac
ataaaccatttagtggagaaaggagactacgacaccgctgcaaggaagtgtcaaaaggtt
cttgggaaaaacatggaattatgggaaaatgaagtttataggttcaaaaccattggacaa
ctgaaggccatcagtcagtatctacccagaggagatctgcgtctccgaccagccatctat
gagatgatcctgcacgaattcctcagaactgattatgagggttttgcgaccctgatccgg
gaatggcccggagagctttacaacaacatggccatcgttcaggccgtcacagatcacctg
aagagggatcccaccaacagcaccctgctcaccacactggctgaactgtacacgtacgat
cagcggtacgacagagccttagaaatctacctgagactgaggcacaaagatgtttaccag
ctgatccacaaacacaacctgttctcatccattgaagacaagatcgtacttctcatggac
tttgataaagagaaagccgttgacatgctcctcgacaatgaagacaagatatcaacagac
agggtggtggaagaacttgccgacagacccgagcttctgcatgtgtatctccataaatca
ttcaagcgcgaccaccacaaaggccaaaagtaccacgagcggcagattggtctgtacgca
gagtatgaccgaccaaatctcttgcctttcctgagagacagcacacactgcccgcttgaa
aaggctcttgagatttgtcaggagaggaactttgtagaagagaccgtcttcctgctcagc
aggatggggaactgcagacgagctctgcagatgatcatggaggagctggaggacgtggac
aaagccatagattttgctaaagagcaggacgatgcagagctgtgggaggacctcatctcc
tattctattgacaaaccacctttcatcactggcctccttaataacatcggtactcatgtg
gatcccatcctactcatctatcgcataaaggagggcatggagatcccgaacctcagagat
tcactagtgaaaatccttcaggattacaatctacagattatgctgagagaaggatgtaag
aagatcctggtggccgactcgctctcgctgctgcagaagatgcacagaactcagatgaga
ggagtcagggtcgatgaggagaacatttgtgaatcatgtcacgctactatattaccatcc
gacatggccaaacccttcagcgtggtggtgtttcactgcagacacatgtttcacaaagaa
tgtttaccatcaccaggaacaattcatggcgtccagttttgtaacatctgcagtgcgaag
aggcgggggccaggaagtggaatacatgagatgaaaaagtaa
DBGET
integrated database retrieval system
