Paralichthys olivaceus (Japanese flounder): 109630255
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Entry
109630255 CDS
T06037
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109630255 (ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109630255 (ddx6)
03036 Chromosome and associated proteins [BR:
pov03036
]
109630255 (ddx6)
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109630255 (ddx6)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109630255 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
109630255 (ddx6)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109630255 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
109630255
NCBI-ProteinID:
XP_019943893
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSTARTENPVILGLSNQNGQLRGSVKPAGAPGGGGPQQQQQQQQLNQVKGTINNGNSQPA
PTTNAVIKPGDDWKKNLKLPPKDTRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKP
SPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKRDCIQAVVIVPTRELALQ
VSQICIQVSKRMGGVKVMATTGGTNLRDDILRLDETVHVIIATPGRILDLIKKGVAKVNQ
VQMIVLDEADKLLSQDFVVMMEEVLGFLSKQRQILLYSATFPLSVQKFMNSHLQKPYEIN
LMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGY
SCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYL
HRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGIIDKSLYVAEYHSESGE
EVKP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccaggacggagaacccggtgattctgggcttgtctaaccagaacgggcag
ctcagaggctcggtgaaacctgccggagctccaggtggaggaggcccccagcagcagcag
cagcagcagcagctaaaccaggtgaaaggcacaatcaacaatggtaactcccagccagcc
ccgacaacaaacgctgtcatcaagcctggagatgactggaagaaaaatttgaaactgccc
ccaaaagacacaaggatgaaaacttcggatgtgactgcaacaaaaggtaacgaatttgaa
gactattgcctcaagagggagctgctcatgggaatctttgagatgggctgggaaaagcca
tctccaattcaggaggaaagcattcccattgcactgtcaggaagggatattttggccaga
gccaagaatggcacagggaagagtggagcctacctcattcccttacttgaacgcattgac
ctgaagagggactgcatacaagctgtggtcatagtgcccaccagagaactggctcttcaa
gtcagccaaatatgtatccaggtcagcaaacgtatgggtggagtaaaggtgatggcaacc
acaggtggaaccaacttgcgcgacgacattttgagactcgatgaaacagtacatgtgatc
attgcgactcctgggaggattttagacctcatcaagaaaggagtggccaaagtcaatcaa
gtgcagatgattgttctggatgaagctgacaaactcttgtctcaggactttgtggtcatg
atggaggaggttctgggcttcctgtcgaaacagaggcagattcttctttattctgcaacc
ttccctctcagtgtgcaaaagtttatgaattcccacttgcagaaaccttatgagatcaac
ctaatggaggagctgacactgaagggtgtgactcagtattacgcttatgtaactgaaagg
caaaaagtccactgccttaacaccttgttctccaggctccagatcaaccagtctataatc
ttctgcaactcttctcagagagtggagctccttgccaagaagatctcccaactcggttat
tcatgtttctacattcatgccaagatgagacaggagcaccgcaaccgtgtgttccacgac
ttcagaaacggcctgtgtcggaatcttgtctgcactgacctcttcacaagaggaattgac
attcaagctgtgaatgttgtgatcaattttgactttcccaagctgggagaaacatacctt
catcgcattggtagatctggccgcttcggacacttgggtctcgccatcaacctcatcacc
tacgatgatcgcttcaacctgaaagggattgaggagcagcttggaacagagatcaagccc
atccctggcatcatcgacaagagtttatatgtggcagagtaccacagcgagagtggcgaa
gaagtcaagccatga
DBGET
integrated database retrieval system
