Paralichthys olivaceus (Japanese flounder): 109630418
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Entry
109630418 CDS
T06037
Symbol
dhx36
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109630418 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109630418 (dhx36)
03012 Translation factors [BR:
pov03012
]
109630418 (dhx36)
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109630418 (dhx36)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109630418 (dhx36)
Translation factors [BR:
pov03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109630418 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NPHP3_N
NB-ARC
AAA_16
Motif
Other DBs
NCBI-GeneID:
109630418
NCBI-ProteinID:
XP_019944174
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MSYGYGGGGGRRGRRGGRGHRDGSGERWDRDGGRGGFRGSSSDCDQGRGGGGRGGEGGGH
RDRPPPHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDHPGS
ERDSRGARASTSDNWQTDANRGDHCYFDGDLPKEVKQEIDYTSEDEEGSSGQKKAANKSH
RYLTPAAVKDETPDTWDDDEPQEEEKEEKEKLRRRDKDLEFLFQEKVRDSSLDDYLQRDL
QSKKSDPKYKEMLKFREKLPSYGKKEELVELINSSRVLVVSGETGCGKTTQVTQFILDDY
INRGVGSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSSGYQIRLQSRLPRRQGSVL
YCTTGIILQWLHSDPLLSSISHLVLDEIHERNLQSDVLLIIVKDLLTLRDDLKVILMSAT
LNAEKFSKYFDNCPMIHIPGSTFPVEEFLLEDIIEMTRYRPQNQDRRPSWKRGFWQGQNS
RPEKEEKEAEYKDSWPCYERTLQNRYSENTISAVEMLDSNDKIDLELILALIRHIVLNDE
EGAILVFLPGWDNISSLNDLLMAQQMFRSGTHVYFFFFXCLLSSLIHPIFRSPPLSITID
DVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRAS
LLDAYQLPEIMRTPLEELCLQIKILKLGSIARFLEKAPDPPTEKAISLAIKNLVDLNALD
HSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKMA
DMRRRTLSRNSKSDHLTIVNAFQGWEEAKRRGVRYEREFCWDNFLSANTLQMLHNMKGQF
AEHLMHAGFVSSKDPRDPKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSHSKKRPGVKVYT
QADGKVNIHPKSVNAEETEFNYKWLVYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQK
DEDQETIAVDQWIVFSSPARIAHLVKSLKKELDSLLEGKIRNPAPVDWQNRQSKDCAVIS
AIIDLITTQEKPTGGTKSYGRPWASAPRGQHIHFNDDDDDDDD
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgagctatggatacggtggtggtggtgggagaagaggacgaagaggaggccgagggcac
cgagacgggagcggagaaaggtgggacagagatgggggaagaggaggtttcagaggatcc
agctccgactgtgaccaggggcgaggaggaggaggaagaggaggagaaggaggtgggcac
cgggaccgtcctcctccacatctgaagggccgtgagatcgggctgtggtacgcaagatac
ggagccgtgaggaggaaacaggccgacaggagatcgcgagcggtggtccagatggatgag
gccagagagcagcacattaccaagctgctaaattctgtccagaatgaccaccctggttca
gagagagacagcaggggagcaagagcctctacgtctgataattggcaaacagatgccaac
agaggtgatcactgttactttgatggagatttgcccaaagaggtaaaacaggagatagat
tacacatctgaagatgaagaagggagttcgggccagaagaaagcagctaacaagtcacat
cgttacttaactccggcagccgttaaagatgaaacaccagacacatgggatgatgacgag
ccccaggaagaggagaaggaggaaaaagaaaaactgagacgcagagacaaggacctagaa
ttcttattccaagaaaaagtcagagatagttcactggacgattatttacagagagatctg
cagagcaagaaatcagatccaaagtacaaagaaatgctgaaattcagggaaaaactacct
tcctatgggaaaaaagaggagctagtggagctaatcaactctagccgtgtcctggttgtg
agtggggagacggggtgtggaaagaccacgcaagtcacccaattcatcctggatgactat
attaacagaggcgtgggatcgatgtgccgggtcgtgtgcacgcagcctcgtcgcatcagt
gccatctctgtagcagagcgtgtagcagcagagagggctgaaagtgtagggaatggaaat
tcttctggttaccaaattcgcctacagagccggctaccacggagacaaggttcggtcctt
tactgcacaactggcattattcttcagtggcttcactcagacccattgttgtccagtatc
agtcacctggtgcttgatgagatccacgagaggaacctgcagtcggacgttttgctcatc
attgtgaaggacttgctcaccctccgagatgatctcaaggtcatcctcatgagtgcaacg
ctcaacgcagagaagttttccaaatattttgacaactgtccaatgattcacatccctggt
tcgactttcccagtggaagagttcctacttgaggacattatagagatgaccaggtatcgc
cctcagaatcaggaccgtcgaccttcatggaagagaggcttttggcaggggcaaaactcc
agacctgagaaagaggagaaagaggctgaatacaaggacagttggccttgctatgaacgc
acactgcagaacagatattctgaaaacacgatttcagcagtagagatgttggacagcaat
gacaagattgacctggagcttatcttggcactgattcgtcacattgtgctcaatgatgag
gaaggagcaatcctggttttcctcccaggctgggacaacatcagcagcctcaatgacctg
ctcatggctcagcagatgttcagatcaggtacacatgtatattttttctttttctgatgt
ctgctttcctctttaattcatcccatttttcgctctcctcctctcagcatcaccatagac
gatgttgtatatgtgatcgatggaggaaagataaaggagaccaactttgacaccaacaac
aacatcagcaccatgacagcagagtgggtcagcctggccaacgccaaacagaggaaagga
cgcgccgggagagtgtgcccggggaagtgctatcatctgtacaacggtctcagggccagc
ctgctggacgcctatcaattacccgaaattatgaggacaccactggaggagctgtgcctg
cagattaagatattgaagcttggctctatagctcgattcctggagaaagcccctgaccca
cctactgagaaggccatcagtctggccatcaagaaccttgtagacttgaatgccctggac
cactcagagaatctgacagcactgggtttccacctggctcgtctgcccgtggagcctcac
atcggcaaactgatcctgttcggagctctgttgggctgcctcgaccccgtactcaccatc
gccgcttcgctcagcttcaaagaccctttcttcatacccctgggtaaagagaagatggca
gacatgaggaggaggaccctgtccagaaactccaagagtgaccacctcaccattgtcaac
gccttccagggctgggaggaagccaagcgacgcggtgtcaggtatgagagggagttctgc
tgggacaacttcctgtctgcaaatactcttcagatgctgcacaacatgaagggtcagttt
gctgaacatctgatgcatgcaggctttgtcagcagcaaggacccgagagaccccaaatct
aatgtcaactcggacaatgagaagttaatcaaagcggtgattgtcgcaggcctgtaccct
aaggtggccatgatcagaccatcgcacagcaaaaagaggccgggggttaaggtgtacacc
caggctgatggaaaagtgaatatccacccgaaatctgtcaacgccgaagagacagagttc
aactacaagtggctcgtctaccacctcaagatgagaacgagcagcatcttcctgtacgat
tgcaccgaggtgtccccgttctcgctgctgtttttcggaggcgacatcaccatccagaag
gacgaggaccaggagaccatcgctgtggaccagtggatcgtcttcagttccccggcacgc
atcgctcaccttgttaagagtttaaagaaggagttggattccttactagaggggaaaatc
cgtaacccggcacctgtggactggcagaaccgtcagtccaaagactgcgctgtcatctcg
gccatcatagatctcatcaccacccaagagaagcctacaggcggcactaagagctatggc
agaccatgggcatctgcccctagaggacaacatattcacttcaatgacgatgatgatgac
gacgatgattag
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integrated database retrieval system
