Paralichthys olivaceus (Japanese flounder): 109630476
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Entry
109630476 CDS
T06037
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109630476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109630476
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109630476
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109630476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
ANCHR-like_BBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
U-box
zf-RING_5
zf-UBR
Motif
Other DBs
NCBI-GeneID:
109630476
NCBI-ProteinID:
XP_019944251
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSKPEEQLVQELSCPICLQLFSDPVVLPCGHNYCQACICKTVAMTDECGKTLPRCPECRE
EYEGIGSLQRNFKLCNIIEGYQAAIPNLEKQHDTHSPAVQVVCEYCIDQPVLAVKSCLKC
EVSLCSRHLQKHHEKESFRTHSVVEPLKELGMKSCTVHQQPLEYFCSNDMTSLCSTCFLQ
GYHQNHDVLTFSVAEEEMRRALASRNKLVSCRLQMAEILLQKTAEEQGASEAIGDKLINK
AVTLMDSMAAVMDRYRERLRMLLEEERGQRRKSWQQGVIALEEQQQQLLDAQQRATEALS
ETDTCVFIHRFLLIEDQLRKVVEITLPSAIPSKAPLNTRRLQTGLKTQDFRSEMIRFMDS
LHIILNPLELTFNIYTAHPSLIVSNDLRTVKYSSSKQTYPDHTERFTSAPQVLCSQGFSS
GEHVWVVEVGANSMWSLGVCYKSIPRRGDHSRLGHNSVSWRLQWKNGKLTVCQSSSNVAL
GEITTHPLRIEVALDYEGGTLSFHSTKGRRDHLHTFRAVFREPVYPAFSIHSNTTESWIT
LHSGM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggaggagcagcttgttcaggagctgagttgccccatctgccttcagctc
ttctccgacccagtggttctcccctgtgggcacaactactgccaagcctgcatctgcaag
accgtagccatgacggacgagtgtggcaaaacgctcccacgttgcccggagtgtcgagag
gaatatgagggcataggctccctccagagaaacttcaaactctgcaacatcattgagggt
taccaagccgccataccgaatctggaaaagcagcacgacactcattccccggccgtgcaa
gttgtctgcgaatactgcatcgaccagccagtgttggctgtgaagtcctgcctgaagtgt
gaggtgtccctgtgctccaggcaccttcagaaacaccatgagaaggagtcattcaggacg
cactccgtggtggagcctctgaaagagctggggatgaagagctgcaccgtccaccagcag
ccactggagtacttctgctccaatgacatgacctcactgtgcagcacatgcttcctacag
ggctatcaccagaaccatgatgtactcaccttcagcgtggccgaagaagaaatgaggcgg
gcactggcgagccgcaataagcttgtgtcctgcaggctgcagatggccgagatcctcctt
cagaaaactgcagaggagcagggagcctccgaagccataggtgacaaactgatcaacaag
gctgtcacactcatggacagtatggctgccgtcatggacaggtacagggagcgtctgcgt
atgcttttggaggaggagagaggccagcgcaggaaaagctggcagcaaggagtgattgca
ttggaagagcaacagcagcagttactggatgcacagcaaagggcaacagaagccctgagt
gagactgacacatgtgtcttcatacacaggttcctgctgattgaagatcagctgagaaag
gttgtggaaatcaccctcccctccgcaatcccatcaaaggcaccgctcaacaccaggcgt
ctccagacaggcctcaaaacccaagacttccgctccgagatgatccgcttcatggattct
cttcacatcatcctcaacccgctggaactcaccttcaacatctacactgcccatcccagc
ttgatcgtgtccaatgatctgcgcacggtcaagtacagctccagcaagcagacataccca
gatcacacggagcgtttcacaagtgcaccacaggttctgtgcagccaaggtttctcaagt
ggtgagcacgtatgggtggtggaggtgggggccaacagcatgtggtcactgggcgtgtgt
tacaagagcatcccgcgccgcggtgaccacagtcgtctgggacacaactctgtgtcctgg
cgattgcagtggaaaaacggtaagctgacagtgtgccagtcctcgtctaatgtggctctg
ggggaaattactacccatccgctgaggattgaggtagcgttagactatgagggtggtacg
ttatcgttccacagcaccaaagggcgcagggatcacctgcataccttcagggcagtgttc
agggagccggtttacccagcattcagtattcactcaaacacaacagagtcctggatcact
ctgcacagtgggatgtga
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integrated database retrieval system