KEGG   Paralichthys olivaceus (Japanese flounder): 109630476
Entry
109630476         CDS       T06037                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:pov00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    109630476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pov04121]
    109630476
Enzymes [BR:pov01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109630476
Ubiquitin system [BR:pov04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    109630476
SSDB
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-B_box zf-C3HC4_4 ANCHR-like_BBOX zf-C3HC4 zf-C3HC4_2 RING_XB3-XBAT31 zf-RING_2 zf-C3HC4_3 U-box zf-RING_5 zf-UBR
Other DBs
NCBI-GeneID: 109630476
NCBI-ProteinID: XP_019944251
LinkDB
Position
Unknown
AA seq 545 aa
MSKPEEQLVQELSCPICLQLFSDPVVLPCGHNYCQACICKTVAMTDECGKTLPRCPECRE
EYEGIGSLQRNFKLCNIIEGYQAAIPNLEKQHDTHSPAVQVVCEYCIDQPVLAVKSCLKC
EVSLCSRHLQKHHEKESFRTHSVVEPLKELGMKSCTVHQQPLEYFCSNDMTSLCSTCFLQ
GYHQNHDVLTFSVAEEEMRRALASRNKLVSCRLQMAEILLQKTAEEQGASEAIGDKLINK
AVTLMDSMAAVMDRYRERLRMLLEEERGQRRKSWQQGVIALEEQQQQLLDAQQRATEALS
ETDTCVFIHRFLLIEDQLRKVVEITLPSAIPSKAPLNTRRLQTGLKTQDFRSEMIRFMDS
LHIILNPLELTFNIYTAHPSLIVSNDLRTVKYSSSKQTYPDHTERFTSAPQVLCSQGFSS
GEHVWVVEVGANSMWSLGVCYKSIPRRGDHSRLGHNSVSWRLQWKNGKLTVCQSSSNVAL
GEITTHPLRIEVALDYEGGTLSFHSTKGRRDHLHTFRAVFREPVYPAFSIHSNTTESWIT
LHSGM
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgtccaagccggaggagcagcttgttcaggagctgagttgccccatctgccttcagctc
ttctccgacccagtggttctcccctgtgggcacaactactgccaagcctgcatctgcaag
accgtagccatgacggacgagtgtggcaaaacgctcccacgttgcccggagtgtcgagag
gaatatgagggcataggctccctccagagaaacttcaaactctgcaacatcattgagggt
taccaagccgccataccgaatctggaaaagcagcacgacactcattccccggccgtgcaa
gttgtctgcgaatactgcatcgaccagccagtgttggctgtgaagtcctgcctgaagtgt
gaggtgtccctgtgctccaggcaccttcagaaacaccatgagaaggagtcattcaggacg
cactccgtggtggagcctctgaaagagctggggatgaagagctgcaccgtccaccagcag
ccactggagtacttctgctccaatgacatgacctcactgtgcagcacatgcttcctacag
ggctatcaccagaaccatgatgtactcaccttcagcgtggccgaagaagaaatgaggcgg
gcactggcgagccgcaataagcttgtgtcctgcaggctgcagatggccgagatcctcctt
cagaaaactgcagaggagcagggagcctccgaagccataggtgacaaactgatcaacaag
gctgtcacactcatggacagtatggctgccgtcatggacaggtacagggagcgtctgcgt
atgcttttggaggaggagagaggccagcgcaggaaaagctggcagcaaggagtgattgca
ttggaagagcaacagcagcagttactggatgcacagcaaagggcaacagaagccctgagt
gagactgacacatgtgtcttcatacacaggttcctgctgattgaagatcagctgagaaag
gttgtggaaatcaccctcccctccgcaatcccatcaaaggcaccgctcaacaccaggcgt
ctccagacaggcctcaaaacccaagacttccgctccgagatgatccgcttcatggattct
cttcacatcatcctcaacccgctggaactcaccttcaacatctacactgcccatcccagc
ttgatcgtgtccaatgatctgcgcacggtcaagtacagctccagcaagcagacataccca
gatcacacggagcgtttcacaagtgcaccacaggttctgtgcagccaaggtttctcaagt
ggtgagcacgtatgggtggtggaggtgggggccaacagcatgtggtcactgggcgtgtgt
tacaagagcatcccgcgccgcggtgaccacagtcgtctgggacacaactctgtgtcctgg
cgattgcagtggaaaaacggtaagctgacagtgtgccagtcctcgtctaatgtggctctg
ggggaaattactacccatccgctgaggattgaggtagcgttagactatgagggtggtacg
ttatcgttccacagcaccaaagggcgcagggatcacctgcataccttcagggcagtgttc
agggagccggtttacccagcattcagtattcactcaaacacaacagagtcctggatcact
ctgcacagtgggatgtga

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