KEGG   Paralichthys olivaceus (Japanese flounder): 109630497
Entry
109630497         CDS       T06037                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109630497 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pov03041]
    109630497 (bcas2)
   03400 DNA repair and recombination proteins [BR:pov03400]
    109630497 (bcas2)
Spliceosome [BR:pov03041]
 Complex B
  Other components
   Prp19 complex
    109630497 (bcas2)
 Complex C
   Prp19-CDC5 complex
    109630497 (bcas2)
DNA repair and recombination proteins [BR:pov03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109630497 (bcas2)
SSDB
Motif
Pfam: BCAS2 Sterile CALCOCO1 RRP36 THOC7
Other DBs
NCBI-GeneID: 109630497
NCBI-ProteinID: XP_019944285
LinkDB
Position
Unknown
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLSTPDFST
FETEIMRNEFERLAARQPMDLLSMKRYELPAPSAGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGTNAWKVYNDNLAFMIEMAQKELQKFRKQIQDMNWQRKNDQLAGGAKLRE
LESNWVSLVSKNYEIERAIIQLENEVTQLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggccgggacggcttcagtcgctggtgaagtgttcgtcgatgctttgccatattttgac
caaggttacgatgcagcaggtgtccgggaagcggctgcagcgttggttgaggaggagacc
aggagataccgacctaccaagaactacctgagctacctgtccacccctgacttctctact
tttgagacagaaatcatgaggaatgaatttgagcgacttgcggctcgacagcccatggat
ctcctgagcatgaagagatatgagctgcctgcgccctccgcaggacagaagaatgacata
acagcgtggcaggagtgtgtcaacaactcgatggctcagcttgagcaccaggcagtccgc
attgagaacctggagctcatgtcacaatatggaaccaacgcatggaaagtctacaatgat
aacctggccttcatgattgagatggcacaaaaggaacttcagaaattcaggaagcaaatt
caggacatgaactggcagcgtaagaacgatcagttggcaggaggagccaaactgcgagag
ctcgagtccaactgggtgtctctggtcagcaagaactacgagatcgagcgggccatcatc
cagctggagaacgaagtcactcagctcagacaacagcagggggatgagaataaggagaac
atccgacaggacttctag

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