Paralichthys olivaceus (Japanese flounder): 109630550
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Entry
109630550 CDS
T06037
Symbol
cacna1s
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04010
MAPK signaling pathway
pov04020
Calcium signaling pathway
pov04260
Cardiac muscle contraction
pov04261
Adrenergic signaling in cardiomyocytes
pov04270
Vascular smooth muscle contraction
pov04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109630550 (cacna1s)
04020 Calcium signaling pathway
109630550 (cacna1s)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109630550 (cacna1s)
09153 Circulatory system
04260 Cardiac muscle contraction
109630550 (cacna1s)
04261 Adrenergic signaling in cardiomyocytes
109630550 (cacna1s)
04270 Vascular smooth muscle contraction
109630550 (cacna1s)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pov04040
]
109630550 (cacna1s)
Ion channels [BR:
pov04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109630550 (cacna1s)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109630550
NCBI-ProteinID:
XP_019944371
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MAANADAAKPDIMSEEELKRKQREKLKKLQATGGNPRPARTLFLFNLKNPFRKACINIVE
WKTFEIIILLTIFANCVALAVFLPMPEEDSNNTNASLESLEYIFLIIFTLECFLKIVAYG
LFFHEGAYLRNCWNILDFVIVFMGLFTFALDTIHMIADMPVEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTNTN
IYATAELELPAPCAQAGNGRRCLINGSECRPGWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWVNDAIGNEWPWVYFVPLILLGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDADSLYDLEGKSRVIYYYR
LARRWNRFFRMKCLVYVKTNSFYWLVMFLVLLNTLTIATEYHHQPEKLTSLQDVASRVLL
VLFVIEMIVKMYALGPRAYFMSLFNRFDFFVVLCGILEMIMLSAGSVAPLGFSVLRCIRL
LRILKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFTDHRP
RRSNFDNFPQALISVFQILTGEDWTTIMYNGIMAYGGPVIPGILVAIYFIVLFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKLRRKLLRSKMPDKTDEERERIAKKLAEQRAK
MEGMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNQ
ILAYADIVFTTVFTIEIVLKMTVYGAFMHKGSFCRNSFNILDLLVVGVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDPSKMTGEECQGSFLKPMENSLQDIVLAKREWLNSDFNFDNVLNGMLALFTV
STFEGWPKLLYRAIDSDAEDMGPVFNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSCYFEYLMFFLIML
NTLCLGMQHCNQSDHVTKLSDTLNLIFTVLFTVEMILKLMAFKARGYFGDPWNVFDFIIV
IGSVVDVILSEVDTALASSGGLYCLHGCAETNPLQVIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVSLVDGTQINRNNN
FQTFPQAVLMLFRCATGEAWQDVMMASMYGKKCDPKSDFLPGEEFTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQ
ANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQDCLRKFLKRQEEYYG
YRPTKKNASGPEIQAGLRSIDEEAAPEMHRTISGDLQNEEELDRAMEEAGEEGIYQRTHG
LFGNRVESFSSEPNNAQSPQMTNQRPLKFSDSQPEPSPDFPTTEFFPTATNTNNNAFADF
SFEREGSPEEFSNPSEDADPGNRRSWSFTVRTDRTQFPYEPNYGDNQSQSSHTAADQLVQ
EGIMN
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacgcagatgcggccaagccggacatcatgagtgaagaggagctgaagcgg
aagcagagggagaagctgaagaagctgcaggccacggggggcaaccctcgacctgcaaga
accctcttcctcttcaacctcaagaatcccttccgcaaggcctgcattaacatcgtagag
tggaaaacctttgagatcatcatcttattgaccatctttgcaaactgtgtggctctggct
gtgttcctgcccatgcctgaagaagatagtaataacaccaacgcaagcttggagagtttg
gagtatatcttcctgatcatcttcacattagagtgctttctgaagatagtggcgtatggg
ctctttttccacgaaggtgcctatttacggaactgttggaacatattggactttgtcatc
gtcttcatgggactcttcacctttgctctggatacgatccatatgatagcagacatgcct
gtggagaagggtgggggttttgacatgaaggcactgagagccttcagagtgctgcgaccc
ctacgcctcgtctctggagtccccagcctgcaggtggtgatgaactccatcctcaaggcc
atgctgcctctgctgcacattgccctgctcgtctttttactggttaccatctatgccatc
atgggactggagctcttcaagtgcaaaatgcacaagacctgttactacactaacacaaat
atctatgctacagcagagctcgagctgcctgctccctgtgctcaggccggtaacggccgc
cgttgtctcatcaatggctcagagtgtcggccaggctgggaaggtcccaacaatggcatc
acccactttgacaacattggttttgccatgttgactgtctaccagtgtatcaccatggag
ggatggaccaaagtgctctactgggtcaatgatgccatagggaacgaatggccctgggtc
tactttgttccccttatcttgctgggttccttctttgtgctcaatctggttctgggtgtg
ctcagcggagagtttaccaaagagagagaaaaggcaaggtcgcgtggagagtttcagaag
ttgcgagagcgtcagcagcttgatgaagatctccatggctacatggaatggatcactcat
gctgaagtcctggatgccgatcgtgagggcaaaggtctgctgcctttgaccagcggggac
tctgacgcagacagcctgtatgatctggaaggcaagagtcgagtcatctactattaccgc
ttggcccgtcgctggaatcgcttcttcaggatgaagtgcctggtctatgtgaaaaccaat
agcttttattggttggtgatgttccttgttttactcaacaccctgactatagcgacagag
taccaccaccagcctgaaaagctcacttccctacaagatgttgccagtcgtgtactgctg
gtgctgtttgtcatcgagatgattgtgaagatgtatgctctgggtcctagagcgtatttc
atgtctctgtttaaccgcttcgacttctttgtggtgctgtgcggtatcctggagatgatc
atgttgtctgcaggatccgtggcccctctgggtttctcggtactcaggtgtattcggctg
ctgaggatcctcaaagtcacaaagtactggacctctctgagtaatcttgtggcctccctc
ctcaactccgtccgctccattgcctccctgctccttctcctctttctcttcatcgtcatc
ttctcgctgctcggcatgcaggtgttcggggggaaattcaactttaccgaccacagaccc
agacgcagtaactttgacaatttccctcaggccctcatcagtgtgttccagatcctcaca
ggagaggactggaccaccatcatgtacaacggtatcatggcctatggtgggcctgtcatc
cctggcatcctggtcgccatctacttcatcgtcctctttgtctgtggaaactatatcctc
ctcaatgtcttcttggccatcgctgttgacaacctggcagaggctgagagtctgacttca
gctcagaaagaaaaggcagaggagaagttaaggaggaagttattacggtccaaaatgcct
gacaagactgatgaagagagggagaggattgctaagaagctggcagagcagagagccaag
atggagggcatgccgaccacagccaagctcaaaattgatgaatttgagtccaacgtcaat
gaagtaaaagatccatttccacctgccgacttcccaggtgatgacgaggaggaagagccc
gaaatccccatcagccctcggccccgaccgatggccgatctgcagctgaaagaagaagcg
gttccattacctgaagccagctcctttttcatctttggtcctcagaacaagttccgaaag
ttatgctacaagatcatcaacgcctcgtccttcaccaacttaatcctcctgttcatcctg
ctctcctccatttccctggcagcggaggaccccatcgatcccaagtcctacagaaaccag
atcttggcctatgctgacatcgtcttcacaaccgtgttcaccattgagattgtgctcaag
atgaccgtgtacggagcgttcatgcacaaaggctctttctgccgtaactccttcaacatc
ctggatctgcttgtggtgggagtctccctgctttctatgggaatggaatccagtgccatc
tctgtggtgaagattctcagggtgttgagggtgctcaggcctctcagggccatcaaccga
gctaaaggattaaagcatgttgtccagtgtgtgtttgtcgccatcaaaaccattggaaac
atcgtcctggtcaccatgctgctgaatttcatgtttgcctgtatcggagtgcagctcttt
aagggtaaattctacagctgcacagacccatccaaaatgaccggcgaggaatgccaggga
tccttcttgaagcccatggagaattccctacaggacatagtgttggccaagagagagtgg
ctcaacagtgacttcaactttgacaatgtgcttaacggcatgctggccctcttcactgtc
tccacgtttgagggatggccaaaactgttgtacagagccatcgattcagatgcagaggac
atgggtcccgtcttcaacaaccgcgtggacgtgtccatcttcttcatcatctacatcatc
ctcatcgccttcttcatgatgaacatcttcgtgggcttcgtcattgtcaccttccaggag
cagggcgagcaggagtataagaactgtgagctggacaagaaccagcgtcagtgtgtgcag
tacgccctgaaggctcgtcctctgaggtgttacatccctaaaaacccctaccagtacagg
gtctggtacatcgtcacctcctgctactttgagtacctcatgttcttcctaatcatgctc
aacaccttgtgtctggggatgcagcactgtaaccagtccgaccatgtgaccaagctgtca
gacaccctgaacttgatcttcaccgtgctcttcactgtcgagatgattctcaagctcatg
gccttcaaagcgagaggctacttcggagacccctggaacgtctttgatttcattatcgtc
attggtagcgtcgttgacgtcatcctgagcgaagtcgatactgccctggcctccagtgga
ggactgtactgtctccatggctgtgctgagacgaatcctctgcaagtaattgcggcttct
gaaaacgcgtcagtttccatcacgttcttccgactcttccgtgtcatgcgtctggtcaag
ctgctgaaccgttcagagggcatccgtaacctgctctggactttcatcaagtccttccag
gctctccctcacgtagctctgctcatcgtgatgctcttctttatctacgctgtcatcggg
atgcagatcttcggaaaggtttccttagtggacggcacccaaataaaccgcaacaacaac
ttccagacattccctcaggctgttctgatgttattccgatgtgcaactggagaggcttgg
caggacgtcatgatggcttcaatgtatgggaagaagtgcgaccccaagtctgacttcctg
ccaggagaggagttcacctgcgggtccaacttcgctgtcttctacttccttagcttctac
tgtctttgtgcatttttgatcctcaacctgtttgtcgctgtcatcatggataactttgac
tacctgactcgtgattggtccctgctcggtcctcatcatctggatgagtttaagaagatc
tgggctgaatatgaccctgaagccactgggagaattaaacatctggatgtggtgacgctg
ctacgacgcatccagcctccactgggctttggcaagttctgtcctcatcgagctgcgtgc
aagcgtttggttggtatgaacatgcctctcaacagtgacggcacggtcaccttcaacgcc
accctgtttgctctggtcagaactgctctcaagatcaaaactgaaggtaattttgagcag
gccaatgaagagctgagggccattataaagaaaatctggaaacgcaccagtatgaaactc
ttagaccaggtcatccccccgataggagatgatgaggtgactgtggggaaattctacgcc
accttcctgctccaggactgtttacgcaaatttttgaagcgtcaggaggagtattacggg
taccggcccacgaagaagaacgcctcaggcccagagattcaggcggggctgaggagtatc
gatgaagaggcagctccagagatgcacaggaccatttcaggagacctgcagaatgaggaa
gagttggacagagccatggaggaggctggagaagagggaatttaccagcgcacacacggt
ctgtttggtaaccgagtggagtcattctcctctgaacccaacaacgctcagtccccacag
atgaccaatcagcggcctctcaagttctccgacagccaacctgagccttcaccagacttc
cccactaccgaatttttccccacagccacgaacactaacaacaacgccttcgcagacttt
tcatttgaaagagagggcagtcccgaagagttttccaatcccagtgaggacgcagatcca
ggtaaccggcgctcctggagcttcacagtgagaacagacagaacacagttcccatatgag
ccgaactatggtgacaatcagagtcaaagctcccacactgcagccgaccagctcgtccag
gagggaattatgaattga
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