Paralichthys olivaceus (Japanese flounder): 109630734
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Entry
109630734 CDS
T06037
Symbol
dcp1a
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109630734 (dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109630734 (dcp1a)
03036 Chromosome and associated proteins [BR:
pov03036
]
109630734 (dcp1a)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109630734 (dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
109630734 (dcp1a)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109630734 (dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
109630734
NCBI-ProteinID:
XP_019944629
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
METLNAGHMMSLAALQRQDPYINTLLDVTGQVALYNFNSKTNEWEKTEIEGTLFVYTRTA
SPHHGFTIMNRLSTENLVEPINKDLEFQLQDPFLLYRNGNLGIYSIWFYDKRDCQRIAQL
MVKIVKQEAEHVQRESPERAEPRRTNGVAEPRPIDILELLSKAKEEYQRGRAYETDGPTE
PHLKAAINPTEHPHSTSQPQKSSHTIVKQITVEELFGSSLPKDPSLPAMPAQNTTNASGD
PSTAYIQKPGSNQRHQVPGLLPAPYALHPSPVFQSVVPMSDPQPLCSVSPLMVPPAGSEQ
RTAPPGPAAASPSASGAFLGQEILSTLKSAVPSMNSDIHKPILAPSFLPSTLVPPHSFHE
PMGKPIIQHSKEMDVFTQPPNLIKPMSAVPMSPGLAVQGPEISVLLSPSAFQQSVSKMTT
TAAASVVLHAPSEPPSTTTGAVEPPPAPCSKTQLQETLIHLIKNDADFLSTIHDAYLQTL
SKDFSNMKL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctaaatgcgggacatatgatgagcttagcagctctacagagacaagacccg
tacatcaacacactgctcgatgtcaccggccaggtggctctctacaacttcaactccaag
acgaacgaatgggagaagaccgaaatcgagggcaccctgtttgtttataccaggactgcc
tcccctcaccatggcttcaccatcatgaaccgactgagcacagagaacctggtggagccg
atcaacaaagacctggagttccagctgcaggatcccttcctgctctataggaacggcaac
ttgggtatctacagtatttggttctatgacaagagggactgtcaacgtatcgctcaactg
atggtcaagattgtaaaacaagaggcagagcatgtccagagagagtcaccagagagggca
gagccaaggaggaccaatggcgttgcagaaccaaggcccatcgatatcctggaactgctc
agcaaagccaaggaagaataccagagaggtcgtgcatacgaaacagatgggcctacagag
ccacacctgaaagcagctatcaaccctacagaacatccccacagcacatcacaacctcaa
aagagctctcacacaatagtgaagcagatcacagttgaggagctctttggctcgtccctc
cccaaggacccctcactccccgccatgcctgcacagaacaccaccaatgcttccggtgac
ccctctactgcctacatccagaagcccgggtccaaccagcgacaccaagtccccggcctg
ctcccagctccatatgcacttcatcccagccctgttttccagtcagtagtccccatgtca
gacccccagcctctgtgctcagtttcacctctcatggtgcctccagctggctcagagcag
cggactgctccccctggccctgctgcagcatcaccatcagcctctggagcttttttgggg
caggaaatattaagcaccctcaaatcggcagtgccatccatgaattcagacatccacaaa
cccatcctcgcacccagctttctgccaagcacactggttccaccccacagcttccacgag
cccatggggaaacccattatccagcacagcaaagagatggatgtcttcactcaacctcca
aacctgatcaaacccatgtctgctgtccccatgagtccaggtcttgctgttcaaggacct
gagatttcggtgcttctctcccccagcgccttccagcagtccgtcagtaagatgacaaca
acagcagcagcatcggtggtcctccatgccccctctgagcccccctccaccaccacagga
gctgtagagcctccgccagctccctgcagcaaaacacagctacaggagactctgatacac
ctcatcaagaatgatgcagacttccttagcaccattcacgatgcttatctgcagactctg
tccaaggacttcagcaacatgaagctatag
DBGET
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