Paralichthys olivaceus (Japanese flounder): 109630751
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Entry
109630751 CDS
T06037
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pov04515
]
109630751 (clstn1)
Cell adhesion molecules [BR:
pov04515
]
Cadherins
Cadherin related
109630751 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
FAM176
Laminin_G_2
Toxin_R_bind_N
EphA2_TM
V_ATPase_I
Cadherin_C_2
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
109630751
NCBI-ProteinID:
XP_019944654
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MRFRGNTGFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDEKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIQASI
ELETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGMVSTSLKEPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQVCDKEWHHYVLNVEFPTVSLFVDGTTFEPFL
VTEDYPLHSSKIATQLTIGACWQENSGHDNDTETVSEPTSGGNARMGQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVSVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVTLFPELRIVSTITREVEADTESEATEGADDDPTVQETVVSEEIMHNLDT
CEVSVVGDELDGEHESLEVDMSQLQPRGLEMSSSNLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEHANNAMVQPNFINPIHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQESGKEN
EMDWDDSALTITVNPMETYEDQHSSEEDEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcagagggaatacgggatttgcatccgctgtcggactggtcctcggactatta
tgtgcggtggaggcagctaaagtcaataagcacaaaccatggattgagacgacgtaccat
gggatcgtaacggaaaatgatgagaaagtgctactggaccccccgctaattgcactggac
aaggatgctcctctacgctatgcagagagttttgaggtgaccctcactgaagaaggtgag
atttgcggcttcaggatccatgggcagaatgtccccttcgaggcagtggtcctggacaag
tccactggcgagggggtcatccgggccaaggacaagctggactgtgagctgcagaaggag
cacaccttcaccatccaggcttacgactgtggagagggtcctgatggtgccaacatgaag
aaatcccacaaggccaccgtccacatccaagtgaacgacatcaacgagtattcacccgtg
ttcaaggagaagtcctacaaagccaccgttatcgagggaaagaagtatgacagcatcctg
aaggtggaggcagtagacgccgactgctcgttccagttcagccaaatctgcaactacgag
attgtcacccctgatgtgcccttcaccgtcgacaaagacggcttcattaagaacacagag
aaactgagctacggcaaagagcgcatgtataagctgactgtgaccgcctacgactgtgga
aagaaccgtgcctcagaggacgtgctggtcaagatcagcgtcaaacccacctgcaaaccc
agctggcaaggcttcaataagaggattgaatatgagcctggtacaggtagcctggccctt
ttccccagcatgcacttggagacctgtgatgaaccaatcacctctatccaggccagtatt
gaactggaaaccaaccatatcggaaagggctgtgaccgtgacacctattctgagaagtca
ctgcacaagctgtgcggcgcgagctctggcacagtggagctcctccctgcaccgagcagc
tctgccaactggacggtcgggctgcccactgataacgggcacgacagtgaccaggtattc
gagttcaatggcacccaggccatcaaggtccccgaaggcatggtgagcaccagcctgaag
gaacccttcaccatctctgtgtggatgagacatggccccggggcccatgagaaggagacc
atcctctgcaactctgacaagacagagatgaacagacaccactactccctctacgtccac
aactgcagactgatccttctcctccgtcaggatccatcagaagccgagaactacaaacca
gcagagtttcactggaaactcgaccaggtatgtgacaaagagtggcatcactatgtgctg
aacgtggagttccccaccgtgtctttgtttgtggatggaactacgtttgagcccttcctg
gttacagaagactacccgctgcactcctccaagattgcaactcagctcacgattggtgcc
tgctggcaagaaaactcaggacatgacaatgacactgagacagtctctgagcccacctca
ggcggaaacgctcgtatgggtcagtttttccgagggaaccttgcagggctgatgattcgc
tctggcaaactggagaacaagaaggtgatcgactgtctgtacacatgcaaggagggcctg
gatgtgcagctgcctgaggaggtcgcttcagctgtcaaggtggagttcaaccccaaccag
tcctctctgactgtggagggcgacgacatcgatgcctttgataaggtcatgcagcacatc
tcctacttgaactctcgccagttcccaacacctggcatcaggcaccttcgcatctccacc
accgtcaaatgcttcaatgaggagtcctgcgtttcggtgccagatgccgagggttacgtg
atggtgctgcagcccgaagaacccaagatcagcctgagcggcatcgaccactttgcccgc
agtgctgccgaattcgaaagccaggaaggcgtgacgctgttccccgagctgcgcatcgtg
agcaccatcacccgtgaagtggaggccgacactgagtctgaagccacggagggagctgat
gatgaccccacagtccaagagacagtggtgtcagaggagatcatgcacaacctggacacg
tgtgaagtgagtgtggtgggagacgagctggacggggagcacgagagcctggaggtggac
atgtcacagctgcagccgcgcggcctggagatgagctcctctaacctgggcctcgtcatc
accggtgtgaacaccatggccaactacgaacaggttctgcacctgatccgttacaagaac
tggcacactgaggctctgtttgacaggaaattcaaactggtctgctctgagctcaacggt
cgctacatcagcaatgacttcaaggttgaggtgaatgtgatccacacagccaatcccgtg
gagcatgctaacaacgccatggtgcagccaaatttcattaaccccatccatcatgcctct
gtggatctgtctggtcacaacctggtcaacgctcaccaggcctcagtggttcccagtgct
gccaccattgtcattgtggtgtgcgtcagcttcttggtgtttatgatcatcctgggcgtg
ttccgcatccgtgctgctcaccagcgaaccatgagagaccaggaaagcggcaaggagaac
gagatggactgggacgactcggctctcaccatcaccgtcaaccccatggagacgtacgag
gaccagcacagcagtgaggaggatgaggaagaggaggaggagagcgaggacggagaggag
gaagatgacatcacgagtgctgagtcagagagcagcgaggacgaggagggcggagagccg
gaggaccagcagggcgccagcagacagcagcagctggagtgggacgactctaccctcacc
tactag
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