KEGG   Paralichthys olivaceus (Japanese flounder): 109631008
Entry
109631008         CDS       T06037                                 
Name
(RefSeq) uncharacterized protein LOC109631008
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109631008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pov03041]
    109631008
   03400 DNA repair and recombination proteins [BR:pov03400]
    109631008
Spliceosome [BR:pov03041]
 Complex B
  Other components
   Prp19 complex
    109631008
 Complex C
   Prp19-CDC5 complex
    109631008
DNA repair and recombination proteins [BR:pov03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109631008
SSDB
Motif
Pfam: Runt Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C C45G9_C
Other DBs
NCBI-GeneID: 109631008
NCBI-ProteinID: XP_019945129
LinkDB
Position
Unknown
AA seq 538 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEEVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMEEYNAQEPNFK
RLRQQHLDGELHPVVKRRPAPSPLDDQDVRSLQQHSTAPPRGLVQTDSPNFLCSSVPQHW
RCNKTLPRTFTVVALGNDVPDGVVVTVMAGNEDNSSAELRNATATMKQGCAQFNDLRFIG
RSGRGKSFNLSINVLTSPPQIATLHRAIKVTVDGPRLPRRQRQKEVRSGAFRSSHSSTAP
SADCRSFSSALWTNEPSFLGHMTSLTSSFNPSPRMHPLPGLHFSSQPPPYSSYLSSPPPP
PPPQLSHSGAFQPGGFCYGPNHPLPTAGEDRNVVAALTNHIEGACLSIRGDEPVWRPY
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgccgcgcatcatgattaaaggaggagtgtggcgcaacaccgaggatgagatcctcaag
gcggcggtgatgaaatatgggaaaaaccagtggtctcgtatcgcttccctgctgcaccgc
aagtccgccaaacagtgtaaagccagatggtacgagtggctggaccccagcattaagaaa
acagaatggtccagagaagaggaggagaaactgcttcatttggcaaaactgatgccaact
cagtggaggaccatcgctcccatcataggacgcactgccgcccagtgtctggagcactat
gaatacctgctagacaaggcagcacaaagggacaatgaggaggaagtgggagacgacccc
aggaagttaaaaccaggggagatcgaccccaaccctgaaaccaaacctgccagacctgac
cctgtggatatggacgaagatgagttggagatgctgtcagaggccagggctcgactcgcc
aacacccaaggcaagaaagccaagaggaaggccagagagaaacagctggaggaagccaga
cggttggccgctctgcagaagcgtagggagctgagagcagcaggaatcgatattcagaag
aagaggaagaagaagagaggagtggactacaatgctgaaattccctttgaaaagaaacct
gcacagggtttctatgacaccagcatggaggagtacaatgctcaggagccaaacttcaaa
cgactcagacaacagcacttggacggagaactccatcctgtggtgaagcgtcggccggca
ccatcgcccctggacgaccaggacgtgcggtccctccagcagcacagcacagcgcccccc
agaggcctggtacagactgacagccctaacttcctctgcagcagcgtcccgcagcactgg
aggtgcaacaagaccctgccaagaaccttcactgtggttgccctgggcaacgacgtgcca
gatggcgtggttgtcacggtaatggccggcaacgaagacaacagcagcgctgagctacgc
aacgccacggcaaccatgaagcaaggctgtgcccagttcaacgacctccgcttcataggc
cgcagcgggagaggtaagagtttcaacctctccatcaacgtgctgacgtcgcccccccag
atcgccaccctgcacagagccatcaaggtcactgtggatggaccgcgactgccgagacgt
cagagacagaaggaggtgaggtccggggcgttcaggtcttctcacagcagcacagctccc
tcagctgactgcagatccttctcctccgctctgtggaccaatgagccgtcgttcttgggc
cacatgacctctctgacctcctcctttaacccaagtcccagaatgcaccccctccctggc
ctccacttctccagccagcctcctccgtacagctcctacctgtcctctcctcctccgcct
ccccccccccagctcagccacagtggcgcattccagcccggaggtttctgctacgggccg
aaccatcctctgccaaccgcgggggaggacaggaacgtggtcgcagcactgaccaatcac
atcgaaggggcgtgtctttcaattagaggagatgagcctgtgtggagaccttattga

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