Paralichthys olivaceus (Japanese flounder): 109631067
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Entry
109631067 CDS
T06037
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04622
RIG-I-like receptor signaling pathway
pov05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109631067 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109631067 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pov04054
]
109631067 (ifih1)
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109631067 (ifih1)
Pattern recognition receptors [BR:
pov04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
109631067 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
CARD
SWI2_SNF2
AAA_22
DUF3638
C1_4
Motif
Other DBs
NCBI-GeneID:
109631067
NCBI-ProteinID:
XP_019945214
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MASAEDEAWESFIGDIRPRLKELVVVERLLDHVHFIGPEQKEHIRQRARAEGDRAAADLL
IDAVTRRPHSLGWFRAFVDALASSGCDYAADIMQEKLPKPDVEAENDQCVRLIQILSPGL
VGMKTEEVCLHCLSRGLITAEDSEIIKAETTSRGPRSGARELLRSIVRGRPGWFSNFLQI
LRETEHQSLYELTGGSPDLDKEGENCSSLKDETTGSEAVSKSPAAADGGCDSADLMVFAV
TEDPQDEAIDLYAGASSEYEPLPKSLEPSQPDGTLPEAAARGPETTDICLRDYQMEVARP
ALEAKNIIICLPTGSGKTRVAVYITKEHLDRRRAEGQPGKVVMLVNKVPLVEQHYSAEFL
PFLKPKYKVERVSGDCQLKISFTEILKKNDVIICTAQILENHLERSNKEEDEGVKLSDLT
LIIIDECHHTQKGEVYNHIMMRYLKQKHKNIKWKKEQREPMPLPQILGLTASPGVGGAKN
MKKAVEHILRICANLDASSIMTSSLGDYKKQPNKTTLAVEDRIEDPFGDVIKKIMNAIHA
HAKLSTNCDLGSQRYEQWIVETEREAAAKEDHKVRVCAEYLRQYSEGLNLSNIIRMHDAF
GFLNEYYEKEKNKKMNPDEEHKIQITDTERFLFNVFKENKEELQSLAGNPQYENDSLSKL
RCKILHEFSSREEARGIIFTKTRRSAIALSHWIQENSKFADIGVKASYVIGGGDQSVVKP
MTPAEQKDVLKNFHNGDVNLLIATTVAEEGLDIPACNFVIRYGLVTNEISMIQAEGRGRA
EDSSYTLVDVKNSGVAEKEWVNEYRKKMMNKAIKNIRSLNQADYEKQIIDFQFQAIMEKK
VRLVKKKQKDMKSECPSKVKFNCRHCSQHVCNGDDINIIENMHRVNVTEQFRELYIARED
PPLHERPLDLETKGLIACKICGQGWGVMMVYRGIECPCLHVQNFVVTLNGKKIAKCSKWS
ELPVRFSAFDYAEQARQLASSSDEDDTN
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgccgaagatgaagcctgggagagtttcattggagacatcaggccgaggctg
aaggagctggtggtggtggagcggctcctggatcatgtccacttcatcggaccagagcag
aaggagcacatccgacagagagccagggcagagggggacagagcggccgccgatctgctc
atcgacgcggtcaccaggaggccacacagcctcgggtggttccgggcgtttgtggatgcg
ctggcgagctcaggctgcgactatgctgcggacatcatgcaggaaaaactccccaaacct
gatgtggaggcagagaacgatcagtgtgtccggctcatacaaatactgtcccccgggctt
gtggggatgaagactgaggaggtgtgtttgcactgtctctccaggggcctgatcaccgca
gaggactccgagattattaaagctgaaacaacaagcagaggacccaggagcggagcccgt
gaacttttgagaagcatcgtgagaggtcgaccggggtggttctcaaactttctccaaatc
ttgcgtgagactgagcaccagtccctgtatgagctgaccggagggtcacctgacctcgac
aaagaaggtgagaactgttcttccctgaaagatgaaaccacaggaagtgaagctgtgtcg
aagagtccagcagcagcagatggaggctgtgacagtgcagatcttatggttttcgcagta
accgaggatcctcaggatgaagccatagacctgtacgcaggagcgagctctgagtacgaa
ccactgccaaaaagcctggagccctcacaaccagatgggactctcccagaagcagcggcc
agaggcccagaaactactgatatttgtctgcgagattatcagatggaagttgcaagacct
gccctggaggcgaaaaacatcattatatgcctcccaacaggaagcggtaaaaccagagtt
gcagtttatattaccaaagaacatctggaccgcaggagggccgaggggcagccggggaaa
gtggtcatgctagtgaacaaggttcccctcgttgaacaacattattccgcagagttcctg
ccttttctgaagcctaaatataaagtggagagagtcagtggagactgccagctcaaaatc
tctttcacagagatcctgaagaaaaatgacgtcatcatttgcacggcccagattctggaa
aaccacttggagagatccaacaaagaagaggatgagggcgtgaagttaagcgatctgaca
ctgatcatcatagatgagtgtcaccacactcagaaaggagaagtctacaaccacataatg
atgcgctacctgaagcagaagcacaagaacataaagtggaagaaggagcagagggagccc
atgccccttcctcagatacttggcctgactgcttcacccggggtcgggggagccaagaat
atgaagaaagcagtggagcacattctgcgaatttgtgcaaacttggacgcttccagtatc
atgacgagcagccttggtgactacaaaaagcaacccaataaaacaactctagctgttgaa
gacagaatagaggatcccttcggtgatgttattaagaaaatcatgaatgccattcatgct
catgcaaagcttagcaccaactgtgaccttggttctcagcgttatgaacaatggattgtt
gaaacggagcgagaagctgcagcaaaggaagatcacaaagtacgggtttgtgcagaatac
ctgcgacagtacagcgagggcctgaatcttagcaacatcatccgcatgcacgacgccttc
ggtttcctaaatgaatactacgagaaggagaaaaataaaaaaatgaacccagatgaggag
cataaaatacagatcacagacactgagagattcctcttcaatgtgttcaaagagaacaag
gaagagctgcagagtcttgcagggaatccacagtatgaaaatgacagcctgtcaaagtta
agatgtaaaatcctgcatgagttcagcagcagggaggaggccagggggatcattttcacc
aaaacacgccgcagtgccatcgctctaagccactggattcaggaaaactcaaagtttgct
gacataggagtgaaagcctcatatgtcattggaggaggagaccagagtgttgttaaacca
atgacccctgcagaacaaaaggacgttttgaaaaacttccacaatggtgatgtcaacctg
ctgattgccacaacagtggcagaggaaggtttggacataccggcgtgcaattttgtcatt
cgatacgggcttgtgaccaatgagatctctatgattcaggctgaaggtagaggaagagct
gaggacagcagttacactctggtcgacgtcaagaactctggggtcgctgagaaggagtgg
gtcaatgagtaccgcaagaaaatgatgaacaaagccattaagaacatcagatccttaaat
caagcagactatgaaaaacaaatcatagattttcagtttcaagctataatggagaagaag
gtgagattggtaaagaagaagcagaaagacatgaagagcgagtgtccatctaaagtgaaa
tttaactgccgacactgcagccaacacgtctgcaacggtgacgacatcaatatcatcgaa
aacatgcacagagtcaatgttacagagcagtttagggaactgtacattgcgagagaagac
ccccctcttcacgagcgacctctggatttggaaaccaaaggcttaatagcatgcaagatt
tgtgggcagggatggggtgtgatgatggtgtaccgtggcatagagtgcccctgcctccat
gtgcaaaacttcgtggtgacgctcaacggaaagaagattgccaaatgctccaagtggagc
gagctgcccgtcaggttttctgccttcgactacgctgaacaagcgagacagttggccagc
agctctgacgaggatgacactaattga
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integrated database retrieval system
