Paralichthys olivaceus (Japanese flounder): 109631176
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Entry
109631176 CDS
T06037
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04382
Cornified envelope formation
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
pov04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109631176 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109631176 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109631176 (col4a2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
109631176 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pov04147
]
109631176 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
pov00536
]
109631176 (col4a2)
Exosome [BR:
pov04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109631176 (col4a2)
Glycosaminoglycan binding proteins [BR:
pov00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109631176 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109631176
NCBI-ProteinID:
XP_019945335
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MQGQHTRGLNNLRLLLLCLVCAILVSGAHAGGKKHSGPCGGRDCSGDCKCFPEKGARGQP
GPLGPHGTQGPFGRPGDHGIQGPKGHKGDSGHSGILGPKGSVGQTGIPGFSGNDGIPGHP
GQAGPRGRPGADGCNGTKGDSGLSGQPGYNGSPGFPGQSGRKGEKGDSLELSVYMERFRG
NPGTPGIHGIFGPPGKPGWQGNRGFPGPKGPPGPPGPRGPKGTMTKVIKGTRGDQGDIGP
PGLQGNSTHPYSEPPYGPHYGIPGHRGEKGVKGERGDESYRGETGVMGFPGSRGEPGADG
RPGPRGDSGEAGPRGRDGFKGVRGEPGELISSGSWPWSTAAGPPGPLGEQGPDGERGPVG
DQGFPGPPGRPASDTQQQVWDFFGPFGIKGEQGEKGPPGEPGSPAVSVGPPGVDGRQGIR
GPPGAIGTWSEFFKGAPGGRGRPGNAGYKGVKGDHGECECSVVNSPSGLPGPAGDRGDPG
MMGEFGQEGDSGDPGPRGDDGFPGSHGLNGEPGPKGQKGEATVATQKGYPGDQGDPGRDG
ESGAQGVPGLNGLPGIPGSQGPPGEGPWGERGDKGFPGRPGQPGVAGLRGEPGAVLGAPK
GHRGLPGDDGLAGYDGVPGIAGSPGGCSSTGDGGRTVTGPCNADPGPPGQPGPPGPTGLP
GFPGLQGQKGTQGLLGVQGEKGETGEQGIGGRSGPPGFAGARGDLGFPGSKGSLGAPGLP
GVPGRHGAQGEKGFHGEIFGASPGPPGDSGMPGLQGNRGQTGNQGEPGYPGMGGMPGMIG
FKGENGPRGLQGEEGRPGPAGKYGYPGDPGQAGPPGSRGATGQPGFTGERGAEGESGPPG
PIGLKGIPGGYGDDGVLGEFGPPGNPGEPGADGRPGVPGMKGYKGSPGMSGFEGKRGDLG
VKGFGGLQGEPGVPGQVGLKGVIGQSGLKGERGVSGQQGSKPQIPAQMIVDMKGVKGDRG
HLGNQGFIGPRGSKGFPGFPGKEGTHGLPGDPSNEKGYYGDPGAQGLPGIKGMPGPTGNR
GISGFQGMPGNRGIKGSPGAYGASGDKGRKGVIGEKGPRIDLPGPTGLRGEDGFQGVLGQ
KGLIGYTGDRGAAGFDGIEGKRGGPGDPGISGHSGSDGQRGTPGNQGQKGFPGIPGKDGH
PGFPGFPGNRGFPGLKGLYGLHGLKGQKGIPGTPGLDIVGPAGEPGVKGAKGETGDTNSQ
PGVPGTAGLKGFEGPPGDQGHPGPPGFRGPIGPDGTPDRPGTSGDPGFIGREGLPGFPGP
RGFPGLDAPPGEKGISGYNGFPGVPGIKGFKGDQGSFGYRGPNGVSGKKGVKGEQGLMGV
PGMTGVKGERGPAGPKGNTGESGYRGFPGSQGPAPVPVRVPGERGLAGPQGILGPMGVRG
EIGPQGPPGDPGFVGPIGQKGMPGISGTPGTSGFRGEVGQMGHPGLQGMEGHRGSPGNPG
LPGMAGRSVSVGYLLVKHSQSDQTPMCPVGMSKLWNGYSLLYLEGQEKAHNQDLGLAGSC
LPRFSTMPFLYCNPGDLCYYASRNDKSYWLSTTAPLPMMPVEEGDIKPYISRCSVCEAPS
VAIAVHSQDITIPQCPAGWRSLWIGYSYLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFIE
CNGAKGTCHYFANKQSFWLTSIDQSFHANPESETLKAGQLLARISRCQVCMKNL
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgcagggccaacacaccagaggactgaataacctgaggctgctgcttctgtgcctcgtc
tgtgccatccttgtctccggggcgcacgcgggtgggaagaagcacagcggcccctgcgga
ggaagagactgcagcggagactgcaaatgtttcccagagaagggggccaggggtcaacct
gggcctcttggtccccatggtacacaggggccttttggaagaccaggtgatcacggcatc
cagggaccaaagggccacaaaggcgacagtggccatagtggcatcctaggtcctaaagga
agcgtgggacaaaccggcattcctggtttttctggaaatgatggcatacctggtcaccca
ggacaagctgggcccagagggaggccgggtgccgacggttgtaacgggacgaagggagac
tcaggtttatctggacaacctggttataacggctcacctggttttcctggacaatcaggc
aggaagggagagaagggagactctctggagctgagtgtgtacatggagcgtttcagggga
aatccaggcacaccagggatccacggaatatttgggcctccaggaaagccaggatggcag
ggtaacagaggcttcccaggaccaaagggtcccccagggcctcccgggcctcgtggacca
aagggcactatgaccaaagtgattaaaggaaccagaggagaccaaggggacattggacct
ccagggctgcaaggaaactctacccatccttattctgagcccccctacggaccccactat
ggaatcccggggcatcgtggagaaaaaggtgttaaaggagaaagaggagatgagtcatac
agaggagaaactggtgtaatgggattccctggatcacggggtgaaccaggcgcagatggg
agacctgggccaaggggggattctggtgaagcaggaccaagaggcagagatggatttaag
ggagtcagaggtgaaccaggagagctgatctcatctggatcctggccttggtctacggca
gctggaccgccaggtccccttggtgagcagggtccagatggagagaggggtccagtagga
gatcaaggcttccccggacccccaggacgtcctgcctctgacacgcaacaacaagtgtgg
gacttttttgggccatttggcataaagggggaacaaggagagaagggcccaccaggggaa
ccagggagccctgcagtcagtgtaggacccccaggggtcgacgggcgccaagggatcagg
ggtcctcctggagcaataggaacatggtctgagttctttaagggggctccaggtgggaga
ggacggcctggcaatgcaggctataaaggagtgaaaggtgaccatggagaatgtgagtgc
agtgttgtaaactctccatcggggcttcctggccctgctggggatcgtggtgatcctggg
atgatgggagagtttggtcaggagggtgattcaggagacccaggtccccgaggcgatgat
gggttccctggctcacatgggctcaatggggaaccggggccaaaaggccaaaaaggggaa
gcaactgtggcaacacagaaaggatatcctggagatcagggggatcctggaagagacggt
gagtcaggagcacaaggtgttccaggcctaaacggtttaccaggaatccctgggagccaa
ggtcctccgggagaagggccctggggagaacgtggagacaaaggtttcccaggtcgacct
ggtcaacccggtgtagctggactgagaggagagccaggtgcagtccttggggcccccaaa
ggccatcgtggtttacctggggacgacggtctggcaggttatgatggagttcctggaata
gctggtagtccaggcggctgtagttcgacaggagatggaggacggactgtaacaggtcct
tgtaatgcagatccaggacctcctgggcagcctggccctccaggacccactggattacca
ggtttcccaggtctacaaggccaaaaaggaacacagggtctacttggtgttcaaggagag
aaaggagaaacaggagagcaaggcataggtggccgttctggaccaccaggttttgccggc
gcacgtggtgacctgggatttcctggtagcaaaggttcacttggtgcccctggtttgccc
ggtgtgcccggccgacacggggcacaaggtgaaaagggtttccatggtgagatctttggg
gcttcacctggacctcccggtgactctgggatgcctgggcttcaaggaaatagaggccag
actgggaatcaaggagaacccggctatccaggaatgggtggcatgccaggaatgattggc
ttcaaaggagagaatggacctagaggattgcagggggaggaagggaggcctgggcctgct
ggcaagtatggctaccctggagaccctgggcaagcaggtccacctgggtctcgtggcgct
actggacagccaggtttcactggagagaggggagctgaaggagaatcaggccctccaggt
ccaattggattaaaaggaatccctggggggtacggtgatgacggtgtccttggagagttt
ggcccacctggtaatcccggagagccaggtgcagatggacgcccaggagtcccaggaatg
aagggatacaaaggatctcccggcatgtcaggcttcgaggggaaaaggggtgatctcggg
gtgaagggcttcggggggctgcaaggagaacctggagtgccgggccaagtcggcctaaaa
ggagtgataggtcaaagtggactgaagggtgaacgtggtgtgagtggtcaacaagggtca
aagcctcagatccctgcccagatgattgttgacatgaagggtgttaagggagaccgcgga
catctaggaaatcaaggtttcattgggccaagaggttctaagggtttccccggtttccct
ggcaaggagggaactcatggtttacctggagatcccagcaatgagaaaggatattacgga
gatccaggtgcacaggggctcccagggataaagggaatgccaggccccactgggaatcga
ggaatttctggttttcaaggaatgccgggaaacaggggaattaaaggaagtcctggagcc
tatggtgcatcaggagacaagggaaggaagggggtcataggtgaaaaaggtcctaggata
gaccttccaggacccactggactgagaggagaggatggcttccaaggagttctcggccaa
aaaggactgattggatacactggggacaggggtgctgctggttttgatggcattgaaggg
aaaagaggaggtccaggtgatccaggaatatcaggacacagcggctcagatgggcagagg
ggaactcctggtaaccagggtcaaaaaggctttcctggaattcctggaaaagatggacac
ccgggttttcctgggtttccaggcaacagaggtttccctggcctgaagggtctttatgga
ttacatggactgaaaggacagaagggtatcccaggaacaccgggtctggatatcgttgga
ccagctggggagcccggagtcaaaggagctaagggagagaccggtgacaccaacagccag
ccgggcgttcctggaactgcgggtttgaaaggcttcgaaggacctccaggtgaccagggt
catcctgggccaccaggattccggggccccattggaccagatgggaccccagacagacca
ggaaccagtggggaccctggttttataggacgtgaaggattaccaggtttccctggacca
agaggatttcccggcctggatgctccccctggagaaaagggcatatcaggatataatggg
tttcctggagtccctggtataaaaggatttaaaggagatcaaggatcatttggatacagg
gggcctaatggtgtttctgggaagaaaggtgtgaaaggggagcaagggctgatgggagtt
cctggtatgactggagtgaagggagaaagaggaccagctggtccaaaaggaaatactggg
gaatcaggttaccgtgggttcccaggaagccagggtcctgctccagttcccgtcagagtc
ccaggagagaggggccttgcgggaccacagggtatccttggaccgatgggggttagaggg
gaaatagggccacagggtcctcctggtgatccaggtttcgtgggacccattgggcagaag
ggcatgccggggatcagtggaacaccaggaacatctggattccgtggagaagtcggacaa
atgggccaccccggtctgcaaggcatggaaggtcaccgcggcagccctggaaaccctggg
ttacctggcatggccggccgcagtgtcagcgttggctacttactggtgaagcacagtcag
tcagatcagacgcccatgtgtcccgtgggtatgtccaaactgtggaacggctacagtctg
ctgtaccttgagggccaggaaaaagcccacaaccaggacctcggtttggccggctcttgc
ctcccacgcttcagcaccatgcccttcctctactgcaatcctggagacctatgttactac
gccagcagaaatgacaagtcctactggctgtcgacaacggctcctcttcccatgatgccc
gtggaagagggagacataaaaccatacatcagccgctgctcggtgtgtgaagctccgtcg
gttgccatcgcagtccacagtcaagacatcaccatcccacagtgccctgccggctggcgc
agcctgtggatcggctactcctacctcatgcacacagcagcaggaaacgagggtggaggt
cagtccctgtcgtcgcccggctcctgcctggaggacttccgcacgacaccgttcatcgag
tgtaatggagccaaagggacgtgccactatttcgctaacaagcagagcttctggctaacc
tccattgatcagtcattccacgctaacccagaatcagagacgctgaaagcaggccagctc
ctggcacgcatcagccgctgccaggtctgcatgaagaacttgtga
DBGET
integrated database retrieval system
