Paralichthys olivaceus (Japanese flounder): 109631335
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Entry
109631335 CDS
T06037
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04145
Phagosome
pov04814
Motor proteins
pov05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109631335
09142 Cell motility
04814 Motor proteins
109631335
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109631335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pov03036
]
109631335
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pov04812
]
109631335
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
109631335
Cytoskeleton proteins [BR:
pov04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109631335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
Nbas_N
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
109631335
NCBI-ProteinID:
XP_019945583
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEADQLKDAAVHQDDSDLEKKRREAD
ALLQSMGIASDVPVVPPPMSPTAKSAGTPSEAGSQDSDGAVGPRNLHWDSDPSTLQLHSD
SELGRVTTKLGMAKITQVDFPPRETVSYTKETQTPVMTQQKEEEEEEEEIAPPQPAVVTP
TEKPDQKEEEEAPPHELTEEEKLQILHSEEFANFFDHSTRIIERALSEHVDLFFDYSGRD
LEEKEGEIQAGAKLSLNRQFMDERWSKHRVVTCLDWSPQYPELLVASYNNNEDAPHEPDG
VALVWNMKYKRPTPEYVFHCQSAVMSAAFAKFHPNVVVGGTYSGQIVLWDNRSNKRTPVQ
RTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSMELVFKQSKA
VAVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKAGISEMFEGHHGPITGIHCHTAAGPL
DFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDL
WNLNNDTEVPTASVTVEGNPALNRVRWAHSGREIAVGDSDGRVRVYDVGEQIAVPRNDEW
TRFVRTLAEINENRDDAEELAAQRLAA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagtgagctgaaggcagagctggagaggaagaagcaacgtttggctcaa
atcagagaggagaagaaaaggaaggaggaggagcgcaagaagaaagaggcagaccagttg
aaagatgctgcagttcaccaggacgattctgacctggagaaaaaaaggcgtgaggctgac
gccctgctacagagtatgggcatagcctcagatgttcctgtcgtccctcctcccatgtct
ccgactgccaaatcggcaggtacgccaagtgaggcaggaagccaggactctgatggagcc
gtgggacccaggaatctgcactgggactctgacccgtccacacttcaacttcactctgat
tctgagctggggcgagtgactacaaaacttggaatggccaaaatcacacaggtggacttc
cctccacgtgaaactgtgtcctacacaaaagagacccagacacctgtcatgacccagcaa
aaagaagaggaagaagaggaggaagaaattgctcctcctcaaccagcagtcgtgactccg
actgagaaaccagaccagaaagaggaggaggaagcacccccccatgagctaacagaggag
gaaaaactccagatcctgcactctgaggagtttgcgaatttctttgaccacagcactcgc
attattgagcgagctctatcagagcatgtggacctcttctttgactacagtggccgtgac
ctggaggagaaggagggtgagatccaggccggagcaaagctctctctcaacaggcagttc
atggacgagcgctggtccaaacatcgtgtcgtcacctgtctcgactggtccccccagtat
cctgaactcctggttgcctcatacaacaacaatgaggatgctcctcatgagccagatggt
gttgcattagtgtggaacatgaagtacaagaggcctacaccggagtacgtcttccattgt
cagtctgctgttatgtcggctgcgtttgccaagttccatcccaacgttgtggtggggggc
acatattcaggacagattgtactgtgggacaacagaagtaataagaggacccctgtgcag
aggacccccctgtctgcagcagcacatacgcacccagtttactgtgtgaacgtggttgga
acccagaacgcccacaatctgattagcatctccactgatggaaagatgtgctcctggagt
ctggacatgctttcacagccacaggacagcatggagctggtgttcaagcagtccaaagct
gtagccgtcacctccatgtctttccctctcggagatgtcaacaatttcgtggtgggcagc
gaggacggctctgtctacatgtcatgtcgtcatggaagcaaagcgggtatcagtgagatg
tttgagggccaccatgggcccatcacagggatccactgtcacacagctgcagggcccctg
gacttctcccacctgtttgttacctcctcctttgactggactgtcaagctgtggagcacc
aagaacaacaagcccctgtactcatttgaggataactctgattacgtgtatgacgtcatg
tggtcaccgactcaccccgctctttttgcttgtgtggacggcgttggacatctggacctg
tggaacctcaacaatgacaccgaggtccccactgccagcgtgacagtggagggtaacccg
gccctcaacagggtcagatgggctcattctggcagagaaatcgctgttggagactctgat
gggcgagtgcgtgtatatgatgttggagagcaaattgcggtgccacgaaacgacgagtgg
acccgttttgtccgcacgctggcagagatcaacgagaacagagatgatgctgaagagctg
gcggctcagcgcctggctgcctga
DBGET
integrated database retrieval system
