Paralichthys olivaceus (Japanese flounder): 109631373
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Entry
109631373 CDS
T06037
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109631373 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109631373 (xrcc5)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
109631373 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Vitellogenin_N
Motif
Other DBs
NCBI-GeneID:
109631373
NCBI-ProteinID:
XP_019945646
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MLYEQVFAGVRREIHRIDGLRIVRNDSHLNKNLDGARAVSPRSHNTVTHRSQKREEMAGM
KSALVLCMDVGFSMSNSAPGEEPPFELAKKVVQKFVQRQVFAETKDEVALVLFGTDSTEN
PLHRDGQYQHITVHRHLRVADFELLEEIENQVHPESQQADWLDALVVCMDLLQTETAKKK
CDRLNIVFLTDLSSPASADHLDVIIENLKKAGVTLQFFLPFPAKENDEEEGGRGDGDRTG
PGHAGSGKGLSGEQKNSLDIMKHIMLSLDEDEGMDEIYTFRNAIEQLSMFKRIERRPMAW
PCQLTIGSSLSIRIVGYKAVTDEKLKKIWFTVDAQTNQTEDVKRETVYCLDDDNETEVPK
DDTIQGFCYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKQNMIHHHQFMGSQVIKIFAG
RDDEHAGVALSAVIQALDELKMVAIVRYAYDRRCNPQIGAAFPCIKQDHQCLLYFQMPFA
EDLRHFTFPSLENNKKFTPSDTQLSAMDSLIDSMMLVEEDENGEKKDMFKVHHIPNPAFQ
RHFQCLHHRGVSPGTPLPPMEPWLKAVLERPEVISKRCQAPLEEMKKKFPLTEVEKKKKL
KTSAQIFGKDTDELDAKKAKGEEEEEEEYNLVDIAEGSVTSVGSVDPARDFCTLIKKKSL
PFGEVCQQLKHRIDQLLGNKNTQYYMKSITCIQAFREQSVKLGNADLYNSYLQSLKGSIP
NRGLEVFWDLLAQDSLTLISKDEVEGSTVSKSEANQFLVAEEKKGETAAPPVEDTGDVDD
LLDMM
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttgtatgagcaggtatttgctggtgtgcgtcgggaaatccaccgtatcgacggcttg
agaatagtgcggaacgattctcacctgaacaagaacctcgatggggcgcgcgcagtttct
ccccggagccataacacggtgacacaccgttctcagaagagggaagagatggcaggaatg
aaatcggctctggtgctgtgcatggacgtgggcttctccatgtccaactctgccccgggt
gaagagcctccctttgaactggcaaaaaaagttgtccagaagtttgtccagcgtcaggtt
tttgctgagactaaggatgaagtagctttagtcctgtttggcacagattccacagaaaac
cctctgcaccgggacggccagtaccagcacatcaccgtccaccgccacctcagggttgca
gattttgaactactggaggaaattgagaatcaggtccatccagagagtcagcaggcggat
tggcttgatgctcttgttgtctgcatggatctcctccagacagaaactgctaagaagaag
tgtgatcgtctcaacatcgtcttcctgactgacctcagctccccagccagtgcagaccac
ctggatgtcattatagaaaatctgaaaaaagctggcgtcactttacagttctttctgcct
ttccctgcgaaggaaaacgacgaggaggagggtggacgaggggatggggacagaacaggc
cctggtcacgcaggtagtggcaaaggtctgtccggggaacagaagaatagccttgacata
atgaaacacatcatgctgagtctggatgaagacgagggcatggatgaaatttatacattc
aggaatgcaatcgagcagctgtctatgttcaagcgaatcgagaggagaccgatggcctgg
ccctgtcagctgacaatcggcagctccctgtcgatccgtatagtcggatacaaagcagtg
acagacgagaagctgaagaagatatggtttacagttgatgctcagaccaaccagacagag
gacgtgaagcgagagacggtctactgtctggatgatgacaacgagactgaggtgccaaag
gatgacaccattcaaggtttttgttatggaagtgacattgttcccttctccaaagtggat
caagaccagatgaagtacaagcacgatgggaaatgctttgctgttctaggcttcaccaaa
cagaacatgatacatcatcatcagttcatgggaagtcaggtcatcaagatttttgctggc
agagatgatgagcacgcaggagtggcgctgtcggccgtcatccaggcgctggatgagctt
aaaatggtggccattgtgcgttacgcctatgatagacgctgcaaccctcaaataggggca
gcattcccttgtattaagcaagaccatcagtgtctgctgtacttccagatgcccttcgca
gaagacctcagacattttacattcccctctcttgaaaacaacaaaaagttcacaccgtca
gacactcagctgtcggctatggactctctcattgactccatgatgttggtagaggaggat
gagaatggagagaaaaaggacatgttcaaggtccaccacattcccaaccctgcgttccag
aggcactttcagtgcctgcatcacagaggagtaagccctggcaccccccttcctcctatg
gagccgtggttgaaggctgttctcgaacgccctgaggtcatcagcaaacgctgccaagct
ccactggaagagatgaagaagaagtttcccctcacagaagtggagaagaaaaagaagcta
aagacgagtgctcagatttttggcaaagacacagacgagctggatgccaagaaagcgaaa
ggagaagaagaagaggaggaggagtataatctggtggacattgctgaaggctctgttact
tcagtgggaagtgtcgatccagctcgagacttctgcacactgatcaagaagaagagtctt
ccattcggagaggtctgtcagcaactcaaacacaggatagaccagttgcttggcaacaag
aacacacaatactacatgaaaagcatcacctgtatccaggcttttcgagagcagtctgtt
aagctgggaaatgctgatctctacaacagttacctccagtccttgaaagggagcatccca
aacagagggcttgaggtcttctgggacctgcttgctcaagattccttaactctaatcagc
aaggacgaggttgagggaagcactgtgtccaaaagcgaggcgaatcagtttctggttgca
gaggaaaagaaaggggagacggctgcaccaccagttgaagatacaggagatgttgatgac
ttgctggacatgatgtaa
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