Paralichthys olivaceus (Japanese flounder): 109631428
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Entry
109631428 CDS
T06037
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109631428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109631428
04121 Ubiquitin system [BR:
pov04121
]
109631428
03036 Chromosome and associated proteins [BR:
pov03036
]
109631428
03400 DNA repair and recombination proteins [BR:
pov03400
]
109631428
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109631428
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109631428
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109631428
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109631428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
zf-RING_6
Ank_2
Ank_3
Ank_4
Ank_5
BRCT_2
BRCT
Ank_KRIT1
zf-RING_5
zf-RING_10
zf-C3HC4_4
zf-C3HC4_3
ANK_LRRK2
PTCB-BRCT
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
109631428
NCBI-ProteinID:
XP_019945749
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MDGDVSVQTADWRKTKEAAANFRRLLLCSKCSDILKEPVCLGTCEHIVCRSCAGPRAGDG
CVVCQSPAWVKDIQINRQLSSIIELFCNLDSLLNPADQPDSVAENQSQPGSPVLKHKKNF
KIWFSPRSRKVRCTVERPSEVSVPDSRSSGETAAAQPDTITAQHQDLSVFNFNSSSQDSG
SSSQTCDNGNGQRKKRSTKKNAASRKTLVLRATRKQGKQTVKKKRLEAINKQWGITEEVD
TLKEQQQPRAKGARRSSKRVSFHSPAVMSDQPQSEVPHGSTTDLSLGRSTTRESLSGGSA
TEMIHQASVDQSMSDCVIQQNTVSANYHNPIDDPEKQDNVSPPKNCSKRTRVAEKVDAVE
TTPKRPRVSPGQRRKSQGQISPVVLNPPFMTSPRCEKSNNGFREEHERSPCVLAAIGRKS
PGASSLGRLSPGSPAIMKKNHKGETLLHLSAIKGDLEAVKELLDQGADPNLKDNAGWTPL
HEACNLGHMAVVEALISKGALLNTPGYENDSPLHDAVRNGHPAIVKLLLQLGASQNVLNL
HGKRPADYAVSEEMLEIFQEAAEGTQFANTSFSPSASLTAVSECARRDELVVCLPSKLPQ
PAQLQLAKLGELLGGKMTDTFSGTVSHVVVPEGHMPTTYSTLLGLLAGCWVVRYSWVEAS
LQAGKWMPETEHEAGEGPQRSRLNRCSLLPPLFDGCFFFLLGSFKAPTKDRLTKLLREGG
GQLLSRQPKPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDPQGPHKPKVVRRGKVWSAP
STWIINCIAAFQLLPVPDPQVLV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgtttccgtgcagacagcagactggaggaaaactaaagaggccgctgcc
aactttcgccgcctgctgctttgctccaaatgctcggatatattgaaggaacccgtgtgt
ctaggaacgtgtgagcatatagtgtgcaggtcctgtgccggcccccgggcaggagatggc
tgcgtggtgtgtcaaagccctgcatgggtgaaggacatccagatcaacaggcaactgagc
agcattatagaactcttctgcaatttggactccctgctcaatcctgcagaccaaccagac
tcagttgctgagaatcagtcacaacctgggagccctgtcttaaaacacaagaagaacttc
aagatctggttcagcccccgcagccgcaaggtgcgctgcacagtggagaggccttccgag
gtcagcgtgccagacagcaggtcgtctggagaaacagctgcagcacagccagacacaatt
actgctcaacaccaggatctgtcagttttcaatttcaattcatcctcccaagactccggc
tcttcgtctcaaacatgcgacaatggaaatggacaaaggaagaagaggtcaactaagaaa
aatgctgccagcagaaagacgttggtgctgagagccacacgaaagcagggtaagcagacg
gtgaagaagaagaggctggaggccataaataagcaatgggggatcacagaggaggtagat
accttaaaggaacagcagcagccacgtgccaaaggagcaaggaggtccagtaaaagggtt
tccttccatagccctgctgtcatgtcagaccagcctcagtctgaagtgccccacgggagc
acgactgacctcagccttggcaggagcacaacgagggaaagcctctcagggggcagcgcc
actgaaatgatacaccaagcctcagtggatcagagcatgtcggactgtgtcattcagcaa
aacacagtgtcagcgaattaccacaatccaatcgacgatcctgaaaaacaggacaacgtt
tctcctccaaagaattgctcaaaaagaaccagagtggcggagaaagttgatgctgtggag
accacgccaaaaaggcccagggtttccccaggccaaaggagaaaatcgcagggtcagata
tcgccggtagtccttaaccctccatttatgacaagccccaggtgtgaaaagagcaacaac
ggcttcagggaggagcatgaacgcagtccctgtgtcttagccgccattggtagaaaatct
cccggtgcttcatctcttggacggctcagcccaggaagccctgcaattatgaagaagaac
cacaagggagagaccctgctgcatctatctgctattaagggagatttggaagctgtcaag
gaactgctggaccagggggctgaccctaacctgaaggataatgctgggtggacacctctg
cacgaagcgtgtaacctgggtcacatggcagttgtggaggcgttgatctcaaagggagcc
cttttgaacacacctggctatgaaaacgattctcctctccacgatgccgtgaggaacgga
catccagccatcgtcaaactgctgctgcaacttggagcctcacagaacgtacttaatctg
catggaaaacgtcctgcagattatgcagtgagtgaggagatgctggagattttccaggaa
gccgcagagggaacccagtttgcaaatacatcttttagcccctcagccagcctcactgcg
gtgagtgagtgtgcgaggagagatgaactggtggtttgtctgcccagcaagttgcctcag
ccagcccagcttcaactggccaaactgggagagctactgggagggaagatgactgatacg
ttttctggcacagtgagccatgtcgtggtgccagaaggacacatgcccaccacctactcc
acacttctgggtcttcttgctggctgctgggttgtcagatacagctgggtggaggcatct
ctgcaggcaggcaagtggatgcccgaaactgagcacgaagcgggagaaggcccccagcgc
agccgcctaaacagatgtagcttgctcccacctctcttcgatggctgtttcttcttcctg
ctgggctcctttaaggcgccgaccaaagacaggctcaccaagctgctgcgggagggcggc
ggtcagctactgagcagacagcccaagcctgacagtgacgtgacacagaccctgagtgcc
gcggcctaccacgccctgccaggctctgaccaggccctgtgcacccagtacatcatcttc
gacccccagggccctcacaagccgaaagtggtcagacgaggcaaggtgtggtccgctccc
tccacctggattatcaactgcatcgcagccttccagctcctccctgtgccggatcctcaa
gtattagtctaa
DBGET
integrated database retrieval system
