Paralichthys olivaceus (Japanese flounder): 109631732
Help
Entry
109631732 CDS
T06037
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109631732 (trim71)
04121 Ubiquitin system [BR:
pov04121
]
109631732 (trim71)
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109631732 (trim71)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109631732 (trim71)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109631732 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
TEN_NHL
zf-RING_5
zf-C3HC4
zf-RING_2
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
109631732
NCBI-ProteinID:
XP_019946180
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSSSSSQTTRRLHVLPCLHAFCR
QCLEGQRSPGDPLKLRCPTCDQKVSISEAGVDSLPSSTFLFSNLLDVVVSSEEQIQSKNG
HHHHHHRGGLGVGSSGFHHTHRGLLHPHHLGEPQCSSCDEENPATSHCLDCQEYLCDNCV
RAHQRVRLTKDHFIERLGESLHLGRVNANSNPGQPGVSVSLAQSLQNNFALLSLFQDRMS
FCQHHDNEVFLFFCETCSVPICRECSVGRHMGHTFVYLQDAVQDCRAITIQLLADAEQGR
QAVQLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKS
LYLQVEKLHQSLTKLDSTIAAVSQVLDEGHHLDVLLARERMLTQIHELKALRGLLQPQED
DRFMFTPPDQTLYIATQSMGLISSGAFAPVTKAHGEGLKSALRGKPASFTVIGYDHDGEP
RLSGGDTVSAIIIPVGDGNLSAAEVTDHQNGSYTISYMPKCEGEHLVSVLVCNQHIQGSP
FKVIVKSGRSYGSLGSQVSAFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKP
CGAFHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGT
KNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVSF
NHEDHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGDGQFLRPQGVAVDQENRIIVADSRN
HRVQVFEPNGNFLCKFGTQGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttccagactcagacctgcagacgtgcccgctctgcaaggagctgtgcggc
tcctctgctcccatctcctccagctcttctacctcctcctcctcctcgcacacctcatcg
tcctccagccagaccaccaggcgactccacgtcctgccctgcctccacgccttctgcagg
cagtgcctcgagggccagcgcagtcccggggaccccctgaagctgcggtgccccacctgt
gaccagaaggtgtccatctccgaggccggcgtggactccctgccttcctccaccttcctc
ttcagcaacctgctggacgtggtggtgagctccgaggagcagatccagagcaagaacggc
caccaccaccatcaccaccgaggaggcttaggtgtgggctcctctggcttccatcatacc
catcgaggcctgctgcacccccaccacctgggtgagcctcagtgtagctcctgcgatgag
gagaacccagccacctcccactgccttgactgccaggaatatctgtgtgacaactgtgtg
cgggcacaccagcgggtgcggctgaccaaggaccacttcattgagcgcctgggggagagc
ctccatctgggccgggtgaacgccaacagcaacccgggccagccaggggtgtccgtgtcc
ctcgcccagtccctgcagaacaactttgccctgctgtctcttttccaggaccgcatgagc
ttctgtcaacaccatgacaatgaggtgttcctgttcttctgtgaaacctgctcggtacct
atctgcagggagtgcagtgtgggccgtcacatgggccacacctttgtttacctgcaagac
gccgtgcaggactgcagagccatcaccatccagctgctggcagatgcagaacaaggacga
caggctgtgcagctaagcatggagaaggtccaggccatggcagagcaagtggagataaag
gcaaaggtggtgcagactgaggtgaaggcactcgtcctaagacacaagaaagcgctggag
gaaagggaatgtgaactactgtggaaggtagagaagatccgtcaggtgaaggccaagtct
ctttacctgcaagtagagaagctgcaccagagtctgaccaagttggacagcaccatcgct
gccgtcagccaggtgctggatgagggccaccacctcgacgtgctgctggctagggagcga
atgctcacccagatccatgagctcaaggccctcaggggcctgcttcagccacaagaggat
gaccgcttcatgtttactcctccagaccagactctgtacatagccacccagtccatgggt
ctcatcagtagtggagcttttgccccggtcaccaaagcccacggtgagggtctgaaaagt
gcgcttcgtggcaagcctgcctcctttactgtgattggatatgaccatgatggcgagcca
cgtctctctggtggggacacagtgtctgcaataatcattccagtcggcgatggtaacctg
tctgcagcagaggtaacagaccaccagaacggctcctacaccatcagctacatgcccaag
tgtgaaggggagcacctcgtgtcagtgctggtgtgtaaccagcacatccagggcagcccc
tttaaggtgatcgtgaagtcggggcgcagctatgggtctctgggttcacaagtctcagcc
ttcgggtgtgagggggaaggagacggtcagctctgtcggccctggggcatcagcgtggac
aaggagggatacgtggtggtggctgatcgcagcaacaaccgcatacagatattcaagcct
tgtggcgccttccaccataagtttggctctctgggttctcggcctggtcagtttgatcgt
ccagctggggttgcgtgtgacagtcagagacgaatcattgtggctgataaggacaatcac
cgtgtacaggtgtttacttttgagggccagttcctgctcaagtttggggaaaagggtacc
aagaatgggcagttcaattatccctgggatgtggctgtcaactctgagggtaagatcctg
gtctcagacaccaggaaccaccgtgtgcagctctttgcccctgacgggtctttcctcaac
aagtacggctttgaaggggccctgtggaaacactttgactctcccagaggagtgtccttt
aaccacgaagaccacctggtggtgaccgacttcaacaaccaccggctcctggtaatccgg
cccgactgccagtcggctcgctttctgggctccgagggcacaggggacgggcagttcctg
cggccccagggtgtcgccgtggaccaggagaaccgcatcatcgtggccgactcccgcaac
cacagagtccaagtgttcgagcccaatggaaacttcttatgcaaatttggcacacagggg
agcggctttggacagatggatcgcccctccggtgtggctgtgacgcctgacggagtcatt
gtggttgttgactttggaaataatcgcattctcaaattctaa
DBGET
integrated database retrieval system
