KEGG   Paralichthys olivaceus (Japanese flounder): 109631802
Entry
109631802         CDS       T06037                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03082  ATP-dependent chromatin remodeling
pov03083  Polycomb repressive complex
pov04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109631802 (rbbp4)
   03083 Polycomb repressive complex
    109631802 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    109631802 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pov03036]
    109631802 (rbbp4)
Chromosome and associated proteins [BR:pov03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     109631802 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     109631802 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     109631802 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     109631802 (rbbp4)
    PRC2.2
     109631802 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     109631802 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109631802 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    109631802 (rbbp4)
   NuRF complex
    109631802 (rbbp4)
   NuRF complex (fruit fly)
    109631802 (rbbp4)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EML Beta-prop_WDR75_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_RIG_1st eIF2A Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 109631802
NCBI-ProteinID: XP_019946343
LinkDB
Position
Unknown
AA seq 425 aa
MADKEAGAYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGK
DYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASQYDSEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECRPDLRLRGHQKE
GYGLSWNSNLSGCLLSASDDHTICMWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLH
ESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHIAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGATE
PEATA
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcggacaaggaagctggtgcatatgatgatgcagtggaggagagggtgatcaacgaa
gagtacaagatctggaagaagaacacccccttcctctatgacctggttatgacccacgct
ttggagtggcccagcctcactgctcagtggctgcctgatgtctccaggccggaggggaag
gattacagtgtgcaccgactggtgctgggcacccacacatccgatgagcagaatcacctg
gtcattgccagtgtccagctgcccaatgatgatgcccagttcgacgcctcacagtatgat
agtgaaaaaggagagtttggaggtttcggctcagtgagtggcaagatcgagatagaaatc
aagatcaatcacgaaggagaggtgaatcgtgcccgttatatgccacagaatccctgcatc
atcgccactaagacccccacctcagatgtgcttgtgtttgactacaccaagcatccctcc
aagccagatccctctggagagtgtcgccctgatctgcgtctcagaggtcatcagaaagag
ggctatggtctctcctggaattcaaatctgtctggctgtctacttagtgcatcagatgat
catacgatctgtatgtgggacatcagtgctgttccaaaggaggggaagatagtcgatgcg
aagacgatattcaccggtcacacagctgtggtggaagatgtctcttggcacttgcttcat
gagtccctctttggatctgtagcagatgaccagaagctcatgatttgggacacacgttca
aacaacacctccaaacccagccatgctgtcgatgcccacatcgcagaggtcaactgtttg
tcatttaacccttacagcgagttcatccttgccactggttctgcagacaagactgtggct
ctttgggacctgagaaacctcaaattgaagctgcattcctttgagtcacacaaggatgag
atcttccaggttcagtggtcacctcataatgagaccatattggcatccagtggaacagac
cgtcgactcaatgtctgggatctcagtaaaatcggagaggagcagtccccagaagatgca
gaagatggcccacctgagctactgttcatccacggaggccacacagccaagatttctgac
ttctcctggaaccccaatgagccctgggtcatctgctctgtgtctgaagacaacattatg
caagtttggcaaatggctgagaacatctacaacgatgaagatcctgaaggggcaacagaa
cctgaagccacagcctaa

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