Paralichthys olivaceus (Japanese flounder): 109632049
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Entry
109632049 CDS
T06037
Symbol
col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pov00535
]
109632049 (col14a1)
Proteoglycans [BR:
pov00535
]
Extracellular matrix (ECM) proteoglycans
Others
109632049 (col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
109632049
NCBI-ProteinID:
XP_019946701
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MLSAGRIRWCLWSPLVLLALVSNFPSQAQDQVPAPRRLRFKVLSSSKLLVSWREPKGDFD
SYLFLYSSIPGGQQREIIASKSNSKVLITDYSPSKDYSVSVIAVSGSEQSRPLQGRFKAE
RGESDGGDRTEPQRLTESLSPPEDANEITGADQFVCHTEAIADIVILVDGSWSIGRINFR
LVRTFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNAFSTKDTVVDAVKNLPYKGGNT
LTGLALSYIMENCFKPESGSRVGVPKIGILITDGKSQDDVIPPAESLRNSGIELFAIGVK
NADENELRSIASEPEDSHVYNVADFNIMSSIVEGLTRTVCEQVEQQDKDIKEKQVPETIG
TPLDLVTSEVTARSFRVSWTHAPGNVEKYRVVYYPAQGGEPQEAVVDGSETSVVLQHLSS
LTEYQLAVFAVYANEASEALRGSETTLVLPRVTGLQLSDVTHSSMKARWDSVDGASGYML
LYAPLKDNGELDEKETKVSDAVTELELEGLSSHTEYTVTVYAMYGDEASDPVTNQESTLP
RSPPSNLQFSDINKPSHQLDHIQMSSSCKIDVKVSVFVFQVEVGPVSSYDLSDLTSLMEY
SVAIFALYNDGESEPLTDGFTTSKTLTVILSGSDNRYLLTSLSPSTEYEVMLTAVFDDES
ESDTVSVIETTLAMTTTVAATTTAVAHQAVRNLQLSDETTQSLEASWEMEDPHVESYRVS
YAGLWGNHQEESVLVPGGERRALLEPLLSDTQYKVTVTPVYRDGQDGISISAMGSTRPLL
SPGNLRVSEEWYNRFRVTWDPPQTPTLGYRIVYQPIYVPGPVLETTVGEDMNSMLLMNLL
SGTEYSVQVTASYPSGQSEPQLVNTKTLFLGISGLSTYQVRSSSMCVQWQPLLQATLYRV
SIQSTLNGQKQEVSLGGSASRQCFYDLTPSSQYQISIHTQIQEMEGPSVSITDMTLPAPT
QAPTDPPTTEPPPTIPPAKEVCKEAKADLAFLVDGSWSIGDDNFLKITRFLYSTMGSLDL
VGPDGTQVAIVQFSDDARTEFQLSSHSNKEALLEAIQRIRYKGGNTKTGRAIKHVKESIF
TSESGARRGVPKVLVVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKP
SDRHVFFVDDLDAVKKIEEQLITFVCEAATATCPSVLMSGNTMAGFRMMEKFGLVEKEYS
ILPGVSLEPGSFNSFPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMIRLLPETPEEPFA
LWEILNKDHEPLVGLILDNSGKTLTFFNYDYKGDFQTVTFEESEIKKIFHGSFHKLHVII
SKTSVKVVLDCSAVGEKSINAAGNITTDGVEILGRMFRGTQDNSAPFQLQMFDIICSTSW
ASRDKCCELPALRVEEQCPSMPHACTCSQDSKGPPGPSGPPGGPGIRGARGDRGEPGVTG
SHGPVGEIGPSGPPGPPGPQGPSGLSIQGPPGAVGQKGERGEIGPAGQMGVPGGQGSPGR
DGPPGARGLPGNIGPQGRQGPSGPVGAPGAPGAPGSGGSAGSQGEQGLPGPAGTKGDKGE
RGDVQSQAAVRAIARQVCEQLIQSHLSRYNSILNQIPAQSAVSVRTVPGPPGEPGRRGNP
GPQGEQGPQGRPGFPGTNGQSGRPGERGLSGEKGERGSPGVGSQGPRGPPGPPGLPGEGR
TGSQGPPGRPGNPGTAGRPGNPGSTGPAGSPGYCDQNSCLGYNVGVQPLPHGGYQSYNPP
YNQQYNPAAVAYNNDQGGEDEEEEEEEGEEEQDPYYHRGYPPQYYPQQPPPSAHDRRGYH
SSPTHSEDVELRSPGVMRRFSRDIVVMEESKEGGH
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcagcagggcggatcaggtggtgtttgtggtctccactggtgctactggcccta
gtttccaatttccccagtcaggcacaggatcaagttccagccccgaggaggctgcgtttc
aaagtgctgagctcaagcaaactccttgtttcatggagggagcccaaaggagactttgac
agctatctgttcctctacagcagtataccaggtggtcagcagagggagatcatagcgtct
aaatctaacagtaaggtgttgataacagactacagcccctccaaagactacagtgtgagt
gtgatcgctgtcagcggcagtgagcagagcagaccccttcagggcagattcaaagctgag
agaggtgagagtgatgggggagacaggactgagccgcagaggctgactgaatcactttca
cccccagaagatgccaacgagatcactggagctgatcagtttgtgtgccacactgaagcc
atcgcagacatcgtgatcctggtggacggttcttggagtatcggtcggatcaactttcgg
ctggtccgcacgttcctggaaaacctggtcaacgccttcgatgtcggcatcgataagaca
aggataggtctggctcagtacagcggggatccaaggatagagtggcatctaaatgccttc
tccactaaagataccgtcgttgatgctgtcaagaatctcccctacaaaggaggaaacacg
ctaacaggccttgcgttgagctatatcatggagaactgcttcaagccagagtctggctcc
cgggttggcgtgcccaagattggaatcctaatcacggacgggaagtcccaggatgacgtt
ataccacctgcagagagcctgcgcaattctgggattgagctgtttgctattggtgtgaag
aacgctgatgagaatgagttgcgctccatcgcctcagaaccagaagactctcacgtctac
aacgtggccgacttcaacatcatgagctccatcgtcgagggtctgaccagaacagtgtgt
gaacaagtggagcagcaggataaagacatcaaggagaaacaggtaccagagacaatcgga
acgccactcgatctggtgacgtcagaggtcacggcacggagcttcagggtgtcatggact
catgcccctggaaacgtagagaaatacagagtggtttattatcctgctcagggaggagaa
ccacaggaggctgtggtggacggcagcgagacctcggtggtgttacagcatctcagctcc
ctcactgagtaccagctggctgtgtttgctgtgtatgcaaacgaggcgagtgaagctctt
aggggatcagaaacaactctggtcctacccagagtgacaggcctgcagctgtctgatgtg
actcacagcagcatgaaagcaagatgggacagcgtagacggggcctccggctacatgctg
ctgtatgcacctctcaaagataatggagagttggacgagaaggagacgaaggtgtcggat
gcagtgacagagctggagctggaggggttgagctctcacacagaatacactgtcactgtt
tatgcaatgtatggtgatgaagccagtgaccctgtaacaaaccaggaaagtacattaccc
cggagtcctcccagtaacctccagttctctgacatcaacaagccttctcaccaattggac
catatacagatgtccagtagctgtaaaattgatgtaaaagtgtctgtgtttgtcttccag
gtggaggtcggtccagtgagctcttatgacctcagtgacctgacgtctctgatggagtac
tcagtagccatttttgccttgtacaacgacggcgaatcagagccactcactgatggattc
actactagtaagacacttactgtgatcttgagtggaagtgataacagatacctgctgacc
agcctgagtccgtccactgagtatgaagtcatgctgacggccgtgttcgacgatgaatca
gagagcgacactgtctctgtcatagagaccacattggccatgacgacaacagttgctgcc
acaaccacggcagtggctcatcaggctgtgagaaacctgcagctgagcgacgagaccacc
cagagtttagaggcatcgtgggagatggaagacccccacgtggagagctacagggtctcc
tatgctggcctctggggcaaccaccaagaggagtctgtgttagttcctggaggagaaagg
agagctctgcttgagccgttattgtcagacacccagtacaaagtgacggtcacgccagtg
tacagggacggacaagatggcatcagcatctctgccatgggatccacacggccccttttg
tctcctggaaacctccgtgtatcagaggagtggtacaaccgcttcagggtcacctgggat
ccaccgcagactcctacactgggttacaggattgtctaccagcccatttatgttccagga
ccagttttggagacaacagtgggtgaagatatgaactccatgctcctcatgaatctctta
agtgggacagaatacagtgttcaagtgacggcctcctacccttcaggacagagtgaaccg
cagctagtgaacactaaaacactgttcctcggcatctctggcttgtcaacctaccaggtg
cgttccagcagcatgtgtgtccaatggcagcctctgctacaggccacattatacagagtc
tccatacagtctacactcaatggccaaaaacaggaagtgagcctggggggtagtgcttcc
cgacaatgcttctatgacctcactcccagcagccaataccagatcagcattcacacgcag
attcaagaaatggagggaccgtcagtctccatcactgacatgacattgccagcgcccact
caggctccgactgatccaccgactacagagccccctcccaccatcccgcctgctaaagaa
gtgtgcaaagaggccaaggctgacctggcgttccttgtcgacggctcctggtccatcgga
gatgacaacttcctgaagatcacacgctttctctacagcaccatgggatcgctggatctg
gtcggaccagatggcacccaggtggcaattgttcagttcagtgacgatgcccggacggaa
ttccagctgagttcccatagcaacaaggaagcactgctggaagctattcagaggatcaga
tacaaaggaggaaacaccaagacaggtcgagccatcaaacatgtgaaagagtccatcttc
acatcagagagtggagccagacggggtgttcctaaagtcctggttgtcctcactgatggg
cgatcgcaagacgatgtcaacaaagtgtccaaggagatgcagatggagggctatatcatc
tttgccattggctttgcggatgcggactacggagagctggtgaacattgccagcaagccc
agcgacagacacgtctttttcgttgacgacttggatgctgtgaagaaaatagaggaacag
ctcattacctttgtctgcgaggctgccactgccacttgtccgtctgttttgatgagtgga
aacacaatggcaggtttccgtatgatggagaagtttggcctggtggagaaagagtacagc
atactacctggagtttctctggagccgggttcatttaacagcttcccctgttacaggtta
caccgtgatgctctggtgtcccagcccaccaagtatcttcaccctgagggtctcccctct
gactacacgatttccatgatgatccgtctacttccagagaccccagaagagccctttgca
ttgtgggaaatcctcaacaaagaccacgagccattagtgggactaatcctggacaactct
ggaaagaccttgacgttcttcaactacgattataaaggagacttccagactgttactttt
gaagaatcagaaatcaaaaagatcttccatggcagcttccacaagctccatgtgatcatc
agtaagacatcggtgaaagtggtgttagattgttctgcagttggggagaaatccatcaac
gcagccggtaacatcaccacagacggggtggagatcctgggaaggatgttcagaggaaca
caggacaactctgctccgttccagctccagatgttcgacatcatctgcagtacatcctgg
gccagcagagataagtgttgtgagctgccagcattaagagttgaggagcagtgcccctcc
atgcctcatgcctgcacctgctcccaggacagcaaaggacccccgggaccctctggaccc
cctggaggtccaggtataaggggagccagaggagacagaggagagccaggagtaacggga
tctcatggtccagttggagagattggcccgtctggacccccaggaccacctggtcctcag
gggcccagtggactctccattcaggggcccccgggtgctgttggacagaagggagagaga
ggagagattggtccagccggacaaatgggtgtccctggaggccaaggctcacctggtaga
gacggccccccaggagcaaggggtcttccaggaaatattggaccacaaggacgacaagga
ccttctggacccgttggagccccgggtgcacctggagctccaggatcgggtggatcagca
gggtcccaaggagaacaagggcttcctggtcctgctggtaccaaaggcgataagggagaa
agaggtgatgtgcaatcccaggctgctgtgcgtgccatcgcacgacaagtgtgtgaacag
ctcatccagagccatttgtctcgctataactccatactgaaccagatccccgcccagtct
gcggtatccgtccggacagttccaggaccaccaggggagccgggtaggagaggcaacccg
ggaccccagggagagcaaggaccgcaaggcagaccaggcttccctggtaccaacggtcag
agtggacgaccaggagagagaggtctgtcaggagagaagggggagagggggagtccaggt
gttgggagtcagggacctcgaggaccacctggacctccaggtctgccaggtgaaggacgc
acaggcagccagggtccacctggtcggcccggcaaccctgggacggcggggaggccgggg
aatccgggtagcaccggaccagccgggtcaccaggctactgtgaccagaactcatgtctg
ggatacaacgttggagtccaacccctgcctcacggcggctaccagtcctacaatcccccc
tacaaccagcagtacaaccccgccgctgtggcttacaacaacgaccaaggaggtgaggat
gaggaggaggaggaggaggagggagaggaagagcaggacccctactaccatcgtggctac
ccgcctcagtactacccccagcaacctcccccatcagcgcacgatcgccgcgggtaccac
tcaagccccacccactctgaggatgtggagctgaggtcgccgggcgtcatgaggaggttt
tcacgggacatcgtcgtcatggaggagagcaaggagggaggacattag
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integrated database retrieval system
