Paralichthys olivaceus (Japanese flounder): 109632465
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Entry
109632465 CDS
T06037
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109632465 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109632465 (hbs1l)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109632465 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
109632465
NCBI-ProteinID:
XP_019947315
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MSRHRNVRGYNYDEDFEDDDMYGQSVDDDYCCISPATANQFIYSRQERQAPKEETLEEEE
DEDVHISPTVSHSLDPLDQAKLYSCLDHMRTVLGEAVPDSVLSQAAIKHGFDPQKALDAI
LSEDAKTAPVQRSNDEMDVVARVGQEKPPLPQRTKQEAVAEKAKSRDVSQSKLDPEVVPK
VARMTVSGKKQTMGFDVPSTGENGVASVRRRGSPENVTVAPATEATSKRPGTPSKGSNGD
ETSTVSTPGRSSGKSRQSINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGN
VNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLMDAP
GHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAVAVN
KMDQVNWQQERFQEIISKLGHFLKQAGFKESDVFYVPTSGLSGENLATRSSVSQLTSWYS
GFSLLEQIDAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGCIQTGDRILAMPPN
ETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKMNVGCVFCDPKEPIRVCTRFRARIL
LFNIEVPITKGFPVLLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNAIVEVQ
TQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgtccgaggttacaactacgatgaagactttgaagatgatgat
atgtacggacagtctgtggatgatgactactgctgcatatcaccagcaacagcaaatcag
ttcatctattcacgccaagagaggcaagcaccaaaggaggagactctagaagaggaagaa
gatgaagacgttcatatctcccctactgtcagccacagccttgaccctcttgatcaagcc
aagttatattcgtgtctggaccatatgcggacagtgctgggagaggcagtaccagattca
gtcctgagccaggccgccataaaacatggattcgacccacagaaggccctggatgcaatc
ctgtctgaagacgctaaaacagccccagttcaaagaagtaatgatgagatggatgtggta
gcaagagttggccaggagaaacctccacttccacaaagaaccaaacaagaggccgtggct
gagaaagctaaaagcagagatgtgtctcagagtaaactggaccctgaagtggttcctaaa
gttgctcgcatgactgtctctggtaagaagcagaccatgggcttcgacgttcccagcaca
ggggagaacggtgtcgcctcagttcgtcgccgtggtagtccggaaaacgtgactgtagca
cctgccacagaggccacctccaaacgtcccgggaccccatccaaagggtcgaatggagac
gaaacgtccacggtttccacgccaggccgctcttctgggaagtccaggcaatcaatcaac
attaaggccgagctggagaagagacagggcggcaagcctctgttaaatttggtggttata
ggtcatgtggacgcaggtaaaagcacgctgatgggccacctgctttatctgctgggcaac
gtcaacaagcgtaccatgcacaagtatgagcaagagtcgaagaaggcggggaaagcctcc
ttcgcctatgcttgggttctggatgaaactggcgaggagagggatagaggtgtgacaatg
gatgttggcatgaccaagtttgagacgaactctaaggtggtgactctgatggatgcaccc
ggacacaaagactttatccccaacatgatcactggagctgcacaggcggacgtggccgtg
ctcgtggtggatgccagcagaggagagtttgaggcaggatttgaggcgggtggtcagacc
agagaacatgccctgctggtgcgttcgctgggtgtcactcagctggctgttgctgtcaac
aagatggaccaggtgaattggcaacaagagcgtttccaagaaatcatctccaaacttggc
cattttctcaagcaggctggattcaaggagtctgatgttttctacgtccccaccagtggc
ctatcaggagaaaaccttgcgaccaggagctcagtttcacagctcacctcctggtactct
ggtttcagcctgctggagcagattgatgcattcaaagctcctcagaggtctgtagacaaa
cccttcagactgtgtgtctcagatgtgttcaaagaccagggttcaggcttctgtgtcacg
gggaagattgaggcaggttgtattcagactggggacagaatactggccatgcctcccaat
gaaacctgcacagtcaaaggtattactctgcatgatgaggctctggactgggccgcagca
ggagaccatgtcagtctgacagtcaccggcatggacatcatcaagatgaacgtgggctgt
gtgttctgtgatcccaaggagccgattcgagtctgtactcgattcagagcccgaatcctc
ctcttcaatatcgaggtgcccatcacaaaaggcttcccagtgttgttgcattaccagaca
gtgagtgaaccagccaccattaggaaactaatcagcgttctacacaagagcagcggtgaa
gtcctcaagaagaaaccaaagtgtttgagtaaaggtatgaacgccatcgtggaggtccag
acccagcggccggtgtcattagagctgtacaaggactacaaggagctgggtcgcttcatg
ctgcgatacgtgggctccaccattgctgcaggggtcgtcaccgagatcaaagaatga
DBGET
integrated database retrieval system
