Paralichthys olivaceus (Japanese flounder): 109632523
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Entry
109632523 CDS
T06037
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109632523 (prpf39)
Spliceosome [BR:
pov03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109632523 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_MalT
TPR_12
Motif
Other DBs
NCBI-GeneID:
109632523
NCBI-ProteinID:
XP_019947400
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MEDTGLHLSDNTRSGMLDTESAAMESNGDAFLPELPVLGQTADWSLDQVAPEPLTSILPE
DSDASQDGAVEQQQPTQEMNSTELGSVEKAVEQFQLASAQLLQEEQPPQPTEEPEQPPVQ
PPEHTAESVDAEQDMSVEPSAAVQDGSQDGAEAPQIAEDGMELEEPSKETTEEVTVPEPQ
LPSEFEKLFKGCEENPEDFNGWVYLLQYVEQENVLESVRKSFDLFFLRYPYCYGYWKKYA
DIEKKHGNVQVAEEVYRRGLQAIPLSVDLWLHYLAFIKENSDPNDPETDGHIRATYEQSV
LAAGTDFRSDRLWESFINWETEQQKLANVTAIYDRILGIPTQLYSQHFQSFKDHVQNNNP
KHFLSEKEFIELRLELSKSSLVAMVGSDGETPAAEEELPPGIEDLADPAKRVTEIENMRH
KVIEVRQEVFNHNEHEVSKRWAFEEGIKRPYFHVKALEKTQLNNWKEYLDFEIENGTPER
VVVLFERCLVACALYEEFWTKYAKYVESYSTECVRHVYKKACNIHLPKKPAIHLLWAAFE
EQQGNVEEARDILKSLEAAVPGMAMVRLRRVSLERRHGNLDQAEMLLREAMDSAEAVTDT
SFYAVKLARQLMKVQRSLSKARKVLLDAIEKDQTSPKLYLNLLELEYSGDVTQNQAEILA
CFDRALNSQMPLESRLLFSQRKVEFLEDFGTDINVLVAAYDEQQKLLKESEPTKRKAENG
YDSSQEPDAKKQRVDDSSAAAANAATDAQANNSAYNYNWYQQYGGWGQNSWGQYNQYPQY
NQYYPPPPT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactggcctgcacctctcagacaacacccgtagtggaatgctggacactgag
tccgctgccatggagagcaatggggatgcttttcttcctgaacttcctgttttaggccaa
accgctgactggtccctggaccaggttgctccagagccactcacaagcatcttgcctgag
gactctgatgcgtcccaggatggtgcagtggaacagcagcaaccaactcaggagatgaat
tccacagagctgggatctgttgagaaggctgttgagcagtttcagcttgccagtgctcag
cttctccaagaggagcagccgccacagcccacagaagaaccagaacagccaccagtacag
ccaccagaacacacagcagagtctgtggatgctgaacaagacatgagtgtggagccaagt
gctgctgtgcaagatggcagtcaagatggggccgaggcaccacagattgcagaggatggc
atggagctggaagaaccatccaaagagacaacagaagaagtgactgttcctgagccacag
ttgcccagtgagtttgaaaaactctttaaaggctgcgaggagaacccagaagacttcaat
ggttgggtctacctgctgcagtatgtggagcaagagaatgtccttgaatctgtgagaaag
tcatttgatttattcttcctacgctatccctactgctatggctactggaagaagtatgct
gacattgagaaaaagcatggcaatgtgcaggttgcagaagaggtatacagaagaggcttg
caggccatccctctcagtgtggacctgtggctacactacctggccttcatcaaggagaac
tcagaccccaatgatccagagacggatggacacattcgagctacttatgaacagtcagtg
cttgcagcaggcacagacttccgctcagaccgcctgtgggagtccttcatcaactgggag
acggagcagcagaagctggcaaatgtcaccgccatctatgatcgcatcttgggcatccca
acccagctatattcccagcactttcagagcttcaaagatcatgtgcagaacaacaacccc
aaacacttcctgtcagagaaggagttcattgaactgagactcgagctctctaaatccagc
cttgtggcgatggtcggcagcgatggagagacaccggctgctgaggaggagctgccacct
ggaattgaagatcttgctgatcctgcaaagagagtgacagagatcgagaatatgcgccac
aaagtcatcgaggttcggcaggaagtattcaaccacaatgaacatgaagtcagcaagcgc
tgggcctttgaggaagggataaagagaccatacttccatgtcaaagccttagagaagacc
cagctgaacaactggaaggagtacctggactttgagattgaaaatgggactccggagcgt
gtggtcgttttgtttgaacgatgccttgttgcctgtgctctctacgaagagttttggacc
aagtatgcaaaatatgtagagagctacagcactgaatgtgtgagacatgtctacaagaag
gcgtgtaacatccacctgcccaagaaacctgccatccacctgctgtgggcagcctttgag
gagcagcagggcaacgtggaggaggctcgtgacatcctgaagtccctagaggcggcagtg
ccaggtatggccatggtgcggcttcggagggtcagtctggagcgtcgccatggtaatttg
gatcaagcggagatgctgttaagggaggccatggattcagcagaggccgttaccgacaca
tctttctatgccgtgaagctggcgaggcagctgatgaaggtgcagagaagtctgagcaaa
gccaggaaggtgctgctggatgcaatcgaaaaagaccagacaagtccaaaactgtatcta
aacctgcttgagctggagtacagtggggatgtgacacagaaccaggcagagatcttggct
tgtttcgaccgagccctgaacagtcagatgcccctggaatctcgcctcctcttctcccag
cgcaaggttgaattcctcgaggactttggcactgacatcaatgtgcttgtggctgcatat
gacgaacagcagaaactgcttaaagaaagtgaacccacaaagcggaaagcggagaacggg
tatgacagctctcaggaacctgatgccaagaaacaacgtgtggatgacagttccgctgct
gcagcaaacgcagcgacagacgcgcaggcaaacaactcggcatataactacaactggtat
cagcaatacggtggttggggacagaactcctgggggcagtacaaccaatacccccagtat
aaccaatactacccccctcctcctacatga
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