Paralichthys olivaceus (Japanese flounder): 109632548
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Entry
109632548 CDS
T06037
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04140
Autophagy - animal
pov04148
Efferocytosis
pov05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109632548 (vps18)
04148 Efferocytosis
109632548 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109632548 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109632548 (vps18)
Membrane trafficking [BR:
pov04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109632548 (vps18)
Hops complex
109632548 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_11
zf_RING_Vps8
zf-RING_Vps41
zf-RING_UBOX
Apolipoprotein
DUF1664
zf-ANAPC11
DUF5600
zf-C3H2C3
zf-rbx1
DUF2175
zf-RING_5
zf-RING_2
DUF4446
Motif
Other DBs
NCBI-GeneID:
109632548
NCBI-ProteinID:
XP_019947446
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNTRQSAQQHSRLSSANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQIELGRKDDSKVHKLFLDPTGSHVLISL
STSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPILVGTSQGIIFEAEISA
SEGSLFNNNPDQYFRQVHSLEEDGKPAPICCLEVERGLENKYFIIATTRKRLFQFVGKVP
EGSEQLGFSSIFNQNQDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWDYTPDIDLTLKKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYE
DVFPDKFGSLKRMIKDPVGGLVWIYTERAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKQSERTQITLLVTWLAELYLNSLGQLESNGNSIIFQETRDEFRHFLSCSKHKECLF
NNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALDVLSKHCDEKLFYK
FSPVLMQHIPKKVVDAWIQMGKKLEPKKLIPALMNYSQMGSTQQISETIRYMEFCVYELN
VTEEAIHNYLLSLYAKYKPDSLLLYLEQAGTHASEIHYDLKYALRLCAEHGYLRACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCL
SSCDLLKIEDILPFFPDFVTIDHFKEAICSSLAEYNQHIDELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHMSAYKQGRLEE
LQKKLAATTQSSKSRHRPAPKDEGDTSSLGKGNAGTSREQIKSDIDDIIASECVYCGELM
IKSIDKPFIDPHKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattctcgacgagtacgaggactcgcagaacacgaggcagagtgcgcagcag
cacagccgcttgtcaagtgccaacatcgggataacgcactcaggttttgtgaacgtgaga
ctggaggaagagaagccgatattcaacaagcagaggatcgacttcacaccaccggagaag
ataaaccatctcgcagtctgcaacaatcagctatgcatgagtctggggaaggacaccctg
ctgaggattgacttggccaagccagatcagccgaatcagattgaattaggaaggaaagat
gacagcaaagtgcacaaactgttcctggaccccacaggctcccatgtgctgatcagcctg
agcaccagcgagtgtctgtaccttaacaggaacacgcagaaggtgcgcagtctgtcccgc
tggagaggccacctcattgagagcgttggctggaacaagctgctgggcaacgagaccagc
acaggacccatcctggttggcaccagtcaaggcatcatctttgaggctgagatctccgca
agcgagggcagcctgttcaacaacaatccagaccagtacttcagacaggtccactcccta
gaggaggatgggaagccagcacccatctgctgcctggaggtggagcgtggcctggagaac
aagtacttcatcatcgccaccacacgcaaacgcctgttccagtttgtgggtaaggtaccc
gaggggtcagagcagctgggcttcagctccatcttcaaccagaaccaggacctgctgccc
agtttccaggagttcccggccaacatgggctacagcgagatcacgttctacacctcgaaa
ctgcggacttcccccaaggcgtttgcctggatgatgggtaatggagttctttatggtcag
ctggactatgtgaggcctgattcactgctaagtgatgtgcaggtatgggattatacccct
gacattgaccttactctaaagaagcccatctccattgtgttgacacagttccacttcctg
ttgttgctccatgaccgagtcaaggccatctgcactctgaatggacaggttgtttatgag
gatgtgttcccagataaatttggctcccttaagaggatgattaaggacccagttggtggg
ttggtgtggatctacaccgagcgggcagtcttccgctatcacattcagcgtgaggccagg
gacgtctggcagatgtacatgagcatgaataaatttgatctggccaaggagtactgccgt
gaccgacctgagtgcatggacatggtactggcgaaggaggctgagcactgcttccagaat
aagcgatacctggagagcgccaagtgctatgcgctgacacagaactactttgaggaaata
gcgctcaagttcatcgaggccaaacaagaggaagccttgaaggagttcttactgaagaaa
ctgaataatttgaaacagagtgagagaacgcagatcacattgctggtcacctggttagca
gagctctatctgaacagtctcggccaactggagagtaacggtaacagcatcatcttccag
gagacacgtgatgagttccgccacttcctcagctgctcgaagcacaaggagtgcctgttc
aacaaccgcagtaccatttatgacctgctggccagccacggcaacgttgacgacatggtt
tacttctcggtcgtcatgcaggactacgagagagtgatttcccactactgccaacacgat
gactacagcgccgctctggacgtgctctccaagcactgtgacgagaagctcttttacaag
ttctcccccgtcctcatgcagcacattcccaaaaaagtagtcgacgcgtggatccagatg
ggaaagaagctggagccaaagaaactcatccccgcgcttatgaactacagccagatgggc
agcacccagcagatcagtgaaaccattcgctacatggagttctgcgtgtacgagctcaat
gtgacagaggaggcgatccacaactacctgctgtcgctctatgctaaatacaagccggac
tctctgctgctgtatctggagcaggcaggtacacatgcctcagagatacactatgacctg
aagtatgctctcaggttgtgcgctgaacatggctacctccgcgcctgtgtcctggtttat
aggataatggaactgtatgaggaggcagtggatctcgctttacaagtcgatgtagacctg
gccaagtcatgcgctgacctgcctgaggacgacgaggaactgaggaagaagctttggctg
aagatcgcgcggcacgttgtgcaagaggagaaagacgtgaagaaagccatgaactgtctg
tccagctgcgacctgctcaagatcgaagacatcctgcccttcttcccggactttgtcacc
attgaccactttaaggaggccatctgcagctccctggcggagtacaaccagcacatcgat
gagctgaagcaggaaatggaggaggcaacagagagcgctaagcgaataagagaagacatc
caagaaatgaggaacaaatatggtgtagtggactcccaagaaaagtgtgctgcctgtgac
ttcccgttgctcaacaggcctttctatctattcttgtgtggacacatgttccactatgac
tgcctcttccaggaagtgactcctcatatgtctgcctacaagcagggtcgcctggaggag
cttcagaaaaagctggccgcaaccacacagtcgtccaagtcacgccaccgcccggcgccc
aaggacgagggtgacacctccagcctgggaaagggcaatgcaggcacgagtcgggagcag
ataaaatcagacattgacgacatcattgcgtccgagtgcgtgtactgcggcgaactgatg
atcaaatccatcgacaagcctttcatcgacccacataaatttgaggaggaaaaatctagc
tggctatga
DBGET
integrated database retrieval system
