Paralichthys olivaceus (Japanese flounder): 109632730
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Entry
109632730 CDS
T06037
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pov03009
]
109632730 (utp20)
Ribosome biogenesis [BR:
pov03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109632730 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
109632730
NCBI-ProteinID:
XP_019947716
LinkDB
All DBs
Position
Unknown
AA seq
2851 aa
AA seq
DB search
MKIKSKSSYHKSENTFRFLTFAERLSNVNIDVVHRIDRTGSYAEEVETYFSEGLTKWRDL
NLTEHFTTFSKEVSNKSQSFNMLVFHQETIVGTLKTHLAVKNSLAYQPLLDLVVQLARDL
QTDFYPHFPDFFVLITSLLETKDTEVLEWAFTCLSYLYKYLWRVMVKDMTNIYSLYSTLL
SHKKEHIRKFAAESFSFLMRKVPDLDALLTHVFSDLQQHPDKAEGAGQLLFEMCKGVRNM
FHSAAANALPVALRKLGPTTNPGVSLPWDTVRDALDYMAQAAADQVDREHFLVLWESLQV
SVVEVLAVVEARGEEADEASDQLERLLFIFHTLASHRDGAKVTKPEAVCQTVLRLIQSSA
LSVPCSRLLLQIISSLLLGENISLPKSLIQETIQKVFGSRLGQDLILEFTKEMFTMKQFE
QLFLPCLLRFTAGLLSCGDALSRHCGLEVLVSLILAKAPPPTDGSMAFETYPLLFTGQST
GSALSSKEEGQVSSMTPEQPTVPELVLSLIKFPEEQNQTIADLSLPWSALMLLPHIRPLS
PVSVVPAVSALLNHLLCQIETEKLGKAGLFVARQALSCLLSLDGSAQLLSLVTVDKITSI
LRRFPTNLSALLLGDLYYTRMSLSGVSEHLSHNALLEVYHILHANLSSNISKIRLLTLRI
LSQFEAELPPQSEGEENVDVQPVFAVCLQAELVPASVQDYRDKLLHLRKLRHDLVQRSLP
QGLPGTFQQVPLRYLIAMLFVNFRPLWDAVIELLVTHARGMDNKEFWVVYHELLEMVAGL
AEKELQDSDEDDVSDDEQESSPQSEPGCNVIESGDVGVLFLEQLKLTCDPNDRTDFPNFR
SLLWRAMTQFPDRVEPRSRELSPLLLRFIRNEFYPADLLVAPTQDLRKRNDAAQQDARMA
VDEEEEREEDEQGVEEKGPQQKKARPRRAASKQLIVHLRVFAKFTNPRSLYLEASLSELY
NQLLCHQDQQIQGVALECLLTYKDPNIVPYKGNLERLLQDKHFKEEIVHFNISEETGVVD
ASHRVRLIPLLMRILFGRLRSKAGSKFQGKASSASRSSIILRFLAGCQAEELGIFIDLLL
EPVCHHSQGSCLEAVERAVAQTDMGAILPLGRQHSLLNIINVVIQKLGHLIHIYLPKVLQ
ILLCVTASVSNVLDNRDQLRAGCISPLKNLRRLGILRVLDFFDAFDSYSFSPEELDAVFQ
AVVWPQVCRLPTESIHSPTPLLKLVHLWCKNARYFPLLAKHRPDHPECDVLTNVFALLSA
KNTSQPIIAMVLDIVESLATANDFVASETETELSVNNSVFPQPAEGALITADSLTEGSRL
LLPHISTLLRYLTSVVRNSDRLKKKKFRAQVAKELNILSKVSRFVSDTEQSSVLISLLLM
YLQKGNNSQETEIDVLATVQNLMRQCVQPATFLRPLSKLFSVIHNKLPRQALTNVFQTLS
DLEPSLKYITDLAAKLNAFDSRHLDEIYFDVRLTAFQDATRRVKDMQTLDLDYISTIIYN
CFHTYEICDMSLADNATLCLSAVITQLAAVGAGEQIYKDVVQHTILDAVHKGLRSKTESV
QHDYTTVLACLVKTFPSKKEFRDLVQLTDYNDLESDFFEHMKHIQIHRRGRALRKLAKQL
TEGTVVMTSRSLQNYIMPYAMTTLLDEKMIKHENMTSASVEVVGAVCRRLTWSKYLYYLK
HFVHILQTSQIEQKLAVSLLVTVLEAFHFDHQTLSREMEAAKAREAGSVSVEADDVDEAA
ADESDASDDEKEMETDSKTASADVPMEVDNDEESNVVSKEAASAKAKGPVAPKPVAVSSG
LPQSKEELESLIIAIHGTVNDSVLPRLHRCLTAKVKSDEEHKAVRSKDVKEEEVSRIPIA
FAMVKLMQTLPQHIMEANLPGILIKVCVHLRNRFQEVRDVARGTLVKIIETLGFRYLHYL
LKEMQSVLVKGYQVHVLTFTVHRLLSALSPTLKSGDLDPCMNMLIDIFNNELFGAVAEEK
EVKGIVSKLMEARHSKSMDSYELLAKFCSKESITKLILPLKEILENTSSLKVCNRVVAVL
RRLILGLLVNGGMTPQDILLLCHGLISQSLPLLTKRDRDKASAKPPPDPRLPPPSCLLLP
PTPKRGGQKAPVSSQTNMHILVDAGLKLLHLSLRKSIVTSSEASTLEMLDPFVQLLLECI
DSMHVKVITEALVGFSWLLKFPLPAVGQNAEQLTKQLFVLLKDYSKAGAARGENYHLVQS
CFKAITILVKNVKSNNITETQLQVLLGYAEEDIYDQSRQATAFGLLKAILSRKLVVPEME
EVLTKVAKLSVTGSNAMIRIHCRQIYLKYLLDYPLGRKLRFHMEFVVAQLHYEHDTGRES
VLEMLAFIFQSFPEKLVTKYSGLFFAPLALVVVNDDSARCKKMAAMAIKSLLTQLELNHK
NTLYSLVISWLKAEKASLRRLGAQICGLFVEVEEEKFARRLKDLLPLLEKEINPDNYEDI
EEEQDEKGADRLLFSYLTLITKLCKYCGLLQLHNPDDTLLNIWGHIEAHLRHPHCWVWLT
ASQLFGQMFAAQQAEQLVTVWRGEQGDAASQSATTAFITSNLDKKIRELALSFSHQLQSK
FLDTASGEQVIKNLLFVGKVIYLISPESDVTSAEEEVKEMEEEEQEEEQQRENENEVEGE
GKEEEAGKEAEKEAEENGKEEEEKGEENEKEEEDEDDKDDRPPSLLWLMKKLCLMAKREA
AHTPKVHVKRTCVFKFLGALAMDLGKEGLGPYLTTIISPLYRELDSTYAEQDPTLKNLAQ
ELIELVKRKVGLEKFSLAFSAVQKEFSQRRVARKRHRAMQAVANPDIAAKKKLKKHRNKI
EAKKRKIEFLRPGYKAKKHRSHALRDLAIVQ
NT seq
8556 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaagtccaagtcttcgtatcacaagtcagagaacacgttcaggtttctcact
tttgctgaacgactctccaatgtcaacatcgatgtcgtccatcgcatcgacagaactgga
tcttatgctgaggaagtagaaacatacttttctgaagggctgacaaaatggagagacctc
aacttgaccgagcatttcacaacattctcgaaagaggtgtccaacaagagccagtcgttc
aacatgctggttttccaccaggagacgatagtggggactctgaaaacccacctggctgtg
aagaacagcctggcctaccagcctctgctggacctggtggttcagctggccagagacctg
cagactgacttctatcctcacttccctgacttcttcgttctcatcacatcactgctggag
accaaggacacagaggtcctggagtgggctttcacctgcctctcctacctctacaagtac
ctgtggagggtcatggtgaaggacatgaccaacatctacagtttgtacagcactctgctg
tcacacaagaaggaacatatccgcaagtttgccgcagagagcttctcttttttgatgaga
aaggttccagatctcgacgccctgctcacccatgtgttctcagacctgcagcagcacccc
gacaaggcagaaggagctggccagctgctgtttgagatgtgcaaaggagtcagaaacatg
ttccactctgctgctgctaatgctctccctgtggccctgcgtaagctcggccccacaacc
aacccaggagtctctctgccctgggacactgtcagggacgctctggattacatggcccag
gccgcagccgatcaagtcgacagagaacacttcctggttttatgggagtccttacaggtc
agtgtggtggaggtcctcgctgtcgtggaggcgagaggagaggaggcagacgaggcgtca
gatcagctggagaggctgctgttcattttccacaccctggcgtcccacagagacggagcc
aaggtcaccaagccagaagccgtctgccagacggtgctgcggttgattcagagctcggct
ctgtcggttccctgttcccgcctcctcctccagatcatctcatccctgctcctcggggag
aacatcagtctgcccaagtccctcatccaggagaccattcaaaaggtgtttggcagcaga
ctgggacaagacctgattctagagttcaccaaggagatgttcaccatgaaacagtttgag
cagctcttcctcccttgcctgctgcgcttcactgctgggttgttgagttgtggagacgcc
ctgtctcgccactgtggcctggaggtgctggtcagcttgatcctggctaaagccccgccc
ccgacagacggctccatggcctttgaaacctacccactgctcttcaccggacagagcaca
ggcagtgcgctgagcagtaaggaggagggtcaggtgagcagtatgacaccagagcagccg
actgtgccggagctggtgctgtccctgattaaattccctgaggagcagaaccagaccatc
gctgacctgtctctgccttggtccgccctgatgctgctgccacacatcagaccgctgtct
cccgttagcgttgttcctgctgtgagcgctctcttaaaccacctcctgtgtcagattgag
acagagaaactgggaaaagctggtctttttgtagccagacaggccctgagctgcctcctc
agtctggacggctctgcccagctcctctctctggttactgtggacaagatcacctcaatc
ctcaggaggtttcccactaacctgtccgccttgctgctgggagacctctactatacccgc
atgtcactcagcggcgtttcagagcatctatcccacaatgcactgctagaggtctaccat
attctgcacgccaacctctcctccaacatctctaagatccgtcttctgactctgaggatc
ctctctcagtttgaggcagagctcccgccacagtctgagggtgaggagaacgtggacgtg
cagccagtgtttgcagtttgcctgcaggcagaactggtgccggcctcggtgcaggactac
agagacaagctgcttcacctgcggaagctcagacacgacctggtgcagcgcagcctgcca
cagggactgccaggaaccttccaacaggtgcctctgcgttatctcatcgcaatgctgttc
gtcaacttcaggccactgtgggacgcagtcattgaacttcttgtgacccatgccagaggg
atggacaacaaggagttctgggtcgtttaccatgaacttctggagatggtggcagggctg
gcagaaaaggaactgcaggacagtgatgaagatgacgtcagtgatgatgagcaagagtct
agtcctcagagtgagccaggctgtaatgtcattgaaagtggggacgtgggggtgctgttc
ctggagcagctgaagttgacctgtgaccccaacgaccggacggacttccccaacttccgc
agcctgctgtggcgcgccatgacccagtttcctgacagagtggaaccacgcagccgagag
ctgagtcctctgctgctcaggttcatcaggaatgagttttatcctgccgacctgctggta
gcccccactcaggacctgaggaaaaggaatgatgctgcccaacaggatgctaggatggct
gtggatgaagaggaggaaagagaggaagacgagcagggtgtggaggaaaaaggcccacaa
cagaagaaggcacgtccaaggagagctgcttccaaacagctgattgtccatttgagagtt
ttcgccaaattcaccaatcctcgttctctctacctggaggccagtctcagtgagctctat
aaccagttgctctgccatcaagaccagcagattcagggagtggccctggaatgtcttctc
acatacaaagacccaaacattgtaccatacaaggggaatcttgagaggcttctgcaggac
aaacacttcaaggaggagattgtccatttcaacatttctgaggagacaggagtggttgat
gcttcacacagagtcagactgatccctctgctcatgaggatcctgtttgggcgtctgcgc
agcaaagcgggcagcaagttccaggggaaagcctcctccgcctcccgctcctccatcatc
ctgcgtttcctggccggctgccaggctgaggagctgggaatcttcatcgacctgctgctg
gagcccgtctgccatcacagccaaggttcctgtctggaagcggtggagagggccgttgct
cagacagacatgggcgccatcctgccgctgggccgtcagcacagcctcctgaacatcatc
aacgttgtgatccagaaactgggtcacctcatccacatctacctgcccaaagtgctgcag
atcctgctgtgtgtcactgcctccgtgtccaacgtcctggacaacagagaccagctgaga
gcagggtgcatcagtcctctgaagaacctgaggcgactcggcatcctgagggtcctggac
ttttttgacgcctttgactcctacagcttcagcccagaagagctggatgctgtcttccag
gctgtggtctggcctcaggtgtgtcgtctgcccacagagagcatccactctccaacccct
ctgctgaaactcgtccatttgtggtgcaaaaatgccaggtacttcccccttctggccaag
cacagaccagaccatccagagtgtgatgtcctcacaaacgtctttgccctcctctctgcc
aagaatacttcccaaccgatcatcgccatggtattggacatagttgagtctctagcaaca
gccaatgactttgttgcctcggagacggagacagagctgagcgtcaacaacagtgtgttc
ccgcagcctgcagagggcgctctcatcactgcagattcattaactgagggctccagactg
ctgctgcctcacatctccactctgctgcggtacctcacctctgttgtacgcaacagcgac
cggctcaagaagaagaagttcagagcgcaggtggccaaggagctcaacatcctctccaag
gtcagtcggtttgtgagcgacacagagcagagctcagtgctcatcagcctgctgctgatg
tacctgcagaaaggaaacaactctcaagagacagaaatcgatgtcctagccaccgtacag
aacctgatgagacagtgtgtgcagcccgccaccttcctgcgcccgctcagcaaactcttc
tccgtcattcacaacaagcttccccggcaggccctcaccaacgtcttccagactctgtcc
gatctggaaccttccctcaaatatatcactgatttagcagcaaagcttaacgcgtttgac
agtcgacacttggacgagatctactttgacgtgcgtctgacagcgttccaagacgccacc
agacgtgtcaaagacatgcagactctggacctggactacatcagcaccatcatttacaac
tgtttccacacctacgagatctgtgacatgtccctggcagacaacgccaccttgtgtctg
tctgcagtcatcacccagctggcagcagtcggagctggagaacagatctacaaggacgtc
gtacaacacaccatcctggacgctgtgcacaaggggctccgcagcaagacagagagtgta
cagcatgactacactaccgtgctcgcctgcctggtgaagaccttcccctccaaaaaggag
ttcagagacctggtgcagctcacagactacaatgacctggagtcagacttcttcgagcac
atgaagcacatccagatccaccgtcggggtcgagcgctgaggaagttggccaagcagctg
accgagggcacggtggtgatgacgtcccgttccctgcagaattacatcatgccgtatgcc
atgaccaccctgctcgatgaaaagatgatcaagcatgagaatatgacgtcagcatcggtg
gaggtggtgggcgcagtttgtcgcaggctgacctggtccaagtatctgtactacctgaaa
cacttcgtccacatcctgcagacttcacagattgagcagaaactggctgtcagtttgctg
gtcacagttctggaagcttttcatttcgaccaccagaccctcagcagagaaatggaggca
gcgaaggccagagaagctgggagtgtctcagtcgaagcagatgacgtggatgaagcggca
gcagacgaatccgacgcaagtgacgatgaaaaggaaatggagaccgacagtaagactgct
tcggctgatgttcccatggaagtggacaatgatgaagaaagcaatgtcgtctcaaaggaa
gcggccagcgctaaagccaagggacctgtggctcctaaacctgtggcagtgtccagcggg
ctgccacagagcaaagaggagctggagtcgttgatcatcgccatccacgggactgtgaat
gacagcgtgctgcctcgtctgcacaggtgtctcaccgcaaaggtgaagagtgatgaggag
cacaaggcggtgaggtcgaaggacgtgaaggaggaggaggtgtcgaggataccgatagca
ttcgccatggttaaactgatgcagacgctgcctcagcacatcatggaggccaatctgccc
ggtatcctgatcaaggtgtgtgtccacctgaggaaccgtttccaggaggtccgtgacgtg
gcaagaggaacgctggtgaagattatagagacactggggttcagatacttgcattacctg
ctcaaagagatgcagagcgtcctggtgaagggttaccaggtccatgttctaacattcact
gtgcaccggctgctgtctgccctcagtccgacccttaagagcggtgacctggacccgtgc
atgaacatgctcatcgatatcttcaacaatgagctgttcggggctgtggccgaggagaag
gaggtgaaggggatcgtctccaagctgatggaggctcgacacagcaagagcatggactcg
tacgagctgctggccaagttctgcagcaaggagagcatcaccaagctcatactgccactg
aaggagattctggagaatacatctagtctgaaggtgtgtaaccgggtagttgcagtgctg
cggcgtctcatcctgggtctgcttgtcaacgggggcatgacccctcaggacatcttactg
ctgtgccacggcctgatcagccagagtctgccactgctcaccaagagagatcgagataaa
gcgtcggctaagcctccccccgaccccagactgccccctcccagctgcctgctcctgcct
ccgaccccgaagagaggaggtcagaaagctcccgtcagcagtcaaaccaacatgcacatc
ctggtggacgccggcctcaagctgcttcacctgagtctgaggaaatccattgtgacgtcg
tccgaggcctcgactctagaaatgctcgaccccttcgtgcagctcctgctcgaatgcatc
gactccatgcacgtcaaggtaatcacagaggctctggtgggcttcagttggctgctgaag
ttccctctgccggcagtggggcagaacgccgagcagctgaccaagcaactctttgtcctg
ctgaaggattactccaaggctggagcggcccgcggggaaaactaccacctggtccagagc
tgcttcaaggctatcaccatactcgtgaaaaatgtcaaaagcaacaacattactgagaca
caactgcaagtgctgcttggatacgctgaagaggacatctacgatcagtcacgccaggcc
accgcctttggtctcctgaaggcgattctgtccaggaagctcgtagttccagagatggag
gaggtgctgacgaaggttgccaagctatctgttaccggcagcaacgctatgatcagaatc
cactgtcgacagatctatctgaagtacctgctggactatccactggggaggaagctgagg
ttccacatggagttcgtggtggctcagctgcactacgagcatgacacaggcagggagtct
gtgctggagatgctggcgttcatcttccagtctttccctgagaaattggtgacaaagtac
agcggcctgttcttcgccccactcgccctggtcgtggtcaatgacgactcggcgcgctgt
aaaaaaatggcggccatggccatcaagtctttgctgactcagctggaattgaaccacaag
aacactttgtactccctcgtcatttcgtggctgaaagcagaaaaggcgagcctgcggcgt
ctgggggctcagatttgcggcctgtttgtggaggtggaggaggagaagtttgcccgtcgt
ctgaaagacctgctgcccctgctggagaaagagatcaaccctgacaactacgaagacatt
gaagaggagcaggatgagaaaggagcagaccggctgttgttcagttatctgactctcatc
accaaactctgtaaatactgtggcctgctgcagctccacaaccctgacgacacactcctg
aacatctggggtcacatcgaagcccatctgcgacaccctcactgctgggtgtggctgacg
gcctcgcagctctttggccagatgtttgcagcccagcaggcagaacagctggtcaccgtt
tggagaggagagcaaggagacgctgcctcccagtcagcaaccaccgccttcatcaccagc
aacctggacaagaagattagagagttggcgttatcgttcagtcaccagctacagtccaag
ttcctggacacagcatcaggagagcaggtgatcaagaacctgctgttcgtcggcaaggtg
atctacctcatctcccccgagtctgacgtcacatccgctgaggaagaagtgaaagaaatg
gaggaggaggagcaggaggaggagcagcagagggagaatgaaaatgaagtggagggagaa
ggaaaggaggaggaggcaggaaaggaggcagaaaaggaggcggaagagaacggaaaggaa
gaagaggagaagggggaagagaacgaaaaggaagaagaggatgaagacgacaaggatgat
cgacctccgtctctactgtggttgatgaagaagctgtgtctgatggccaagagagaggca
gcacacactcccaaagttcacgtcaagagaacgtgtgtgtttaagttcctgggagcttta
gccatggacctggggaaggaaggactcggcccgtatctcaccaccatcatcagtcctctg
tacagagagctggacagcacctacgcagaacaagaccccacgctgaagaacctggcacag
gagctgatcgagctggtgaagagaaaagtggggctggagaaattctcgctggctttctcc
gccgttcagaaggagttttcacagaggagagtggcacggaaacgacacagagccatgcag
gccgtagccaacccagacatcgccgccaagaagaaactcaagaagcacaggaacaaaatc
gaagccaagaaaaggaagattgagtttctacgacccggatataaagccaagaagcaccgg
agccacgcgctcagagacctggccattgtgcagtga
DBGET
integrated database retrieval system
