Paralichthys olivaceus (Japanese flounder): 109632877
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Entry
109632877 CDS
T06037
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pov01001
]
109632877
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109632877
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109632877
Protein kinases [BR:
pov01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
109632877
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109632877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
DUF5054
N6_N4_Mtase
FemAB_like
PRANC
Motif
Other DBs
NCBI-GeneID:
109632877
NCBI-ProteinID:
XP_019947955
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MDERSDNVDNDDIVIIVENEAESLPAQEERLKQQGTIGLMDTCPSCKLSFHNREPKLLPC
LHSFCKRCLPPPFRSADPRRDSQGQVDHNKPLGAIRCPVCRQECWEMDVLDNFFVKDSAE
VPSSTVEKTSQVCMSCDDNTEATGYCVECVEFLCLTCIEAHQRVKFTRDHTIRQKEEMSP
EAVGVTTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHRQYL
ENMTQQLQEKRKTIEEVSSCISNGLQQVEENRKAVTNEIKKSICNLIMEINRKGKILVNQ
LEGLTKEHEMGLKKQQDDVNSLSRHLDHVISFTKWATASHSGTALLYCKRLILYQIHYLM
RASCNPSIVPQSSVRFQCRSGFWATNVDLGSLTVERGPGRPPIPNHQAAPRAEVAAAGLS
LSAQQRQSTLAQLQMQVDKLSQQSHRQPPPNHWSWYQNVRLPGPPCPPPPTRPIHGGSSP
SQGPLGLAQQGRRYGSSHPNTRSPTSSMLHNTGFTPAQSLRELINSSSFPPKPGDVLQGT
SRYTQPLSAGAATQISLHQRSMPEPSFLKRSEASATVPSISISIPKPSYAPSLASASADK
TSTLNHMTVQGRQNSPMAKPSSSDRGTGTSSWKQSSEPPSAPSAKRRRRTSPGPIIIIKD
EPEDEDEVHFVQSSVGSSLPDSSTGAQSKPRLQQKVSVPNLVPGSESNAGKEQCPQPVAQ
PESVKRAEPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLSCHIPTLNESPSGEWFCSFCR
DLVSPEMVYDSDRKDHAASDGFSPVDRRSCERLLLRLFCNDFSTDFQQPASPSETKRYKE
LIQTPMDLSIVKRRLESKSQDGEYYMCPEGFVADVRLIFFNCAKYYKVTSEVGSAGLYLE
DYFEEQLKLVYPDKIFPGGREEQMIPPLEDEIDEEEEVMAENVAPVEDLKPQSPAGQGIP
PVEEDLAPLEEAPATEEQGQLETKEKATDTSEKETEEKKMKETEEKETEEKETEEMETET
KVAVAEDATSPSEEVEKDEKTPVKEVNSSSAADSDTKVAPCSPKKENPELPAEKTVDAAE
TQEEAADTAKEESA
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaggtccgataatgtcgacaacgacgacattgtcatcatcgtggagaacgag
gcggaaagtttgccggcccaggaggagaggctcaagcagcagggcaccatcgggctcatg
gacacttgtcccagctgcaagttgagcttccacaacagggagcccaagctgctgccgtgc
ctccactccttctgcaagaggtgtctgccgccccccttcaggagtgccgaccccaggcgt
gactcccagggtcaggtcgaccacaacaaaccactgggcgccattcgctgtccagtatgc
agacaggaatgctgggagatggacgtgctggataatttctttgtcaaggactctgctgag
gtgccgagcagcactgtggagaaaaccagccaggtgtgtatgagctgcgatgataacaca
gaagcaacaggttactgtgtggagtgtgtggagtttctgtgcttgacgtgcattgaggcg
caccaacgggtcaagttcaccagggatcacaccatacgacagaaggaggagatgtctcca
gaagcagttggcgttaccacacagaagcctgtgttttgtgacatccataagcaggagcca
ctgaaactcttctgtgagacgtgtgaccgactcacctgtcgagattgtcagcttcttaag
cacaaggatcacaactaccagtttctggaggatgcttacagaaaccacaggcagtacctg
gagaacatgacgcagcagttacaagagaaacgaaagaccattgaagaagtgtccagctgt
atcagcaacggacttcaacaagttgaagaaaaccgtaaagctgtaacaaatgaaataaag
aagtccatctgtaacttaatcatggagatcaacaggaaggggaagattctggttaaccag
cttgagggtctaactaaagaacacgagatgggtttaaaaaagcaacaagacgacgtcaat
tctctgagtcggcacctcgatcatgttattagctttacaaaatgggccacagccagtcac
agtggaacagctctgctgtactgcaagagactgatcctttaccagatccattacctgatg
agagcgagctgtaatccctccatcgtccctcagagttctgttcgcttccagtgtcgctca
ggtttctgggccactaacgtagaccttggttctctgacggtagaaaggggcccgggacga
ccgcccatccccaaccaccaagcagctcccagggcagaggtggccgctgcaggtctgtcg
ctctccgctcagcagcgacagagcacgctggctcagctccagatgcaggttgacaagctt
tcccaacagtcccacagacagccccctcccaaccactggtcctggtaccagaacgtcagg
ctcccgggacccccttgccctccgccgccgaccaggcccatccacggaggatcctccccc
tcccagggacccctaggtttggcacaacagggacgcaggtatgggagttcccaccccaac
acgagaagtcccacttcctccatgcttcacaacacgggattcacacctgctcagtctctg
agagaactgatcaatagctccagcttccctcccaaacctggggatgtgttgcagggtact
tctcgctacacacagcctctgtctgccggagcagcgacacagatctcactacatcagagg
agcatgcctgagccctccttcctgaagaggagtgaagccagcgcaactgtcccctccatc
tccatctctatccccaaacccagctacgctccaagtctcgcctcagcatccgcagataaa
acaagcacacttaaccacatgacagttcaaggaaggcaaaactccccgatggccaaacct
tcgtcttcagacagaggcacagggacgtcttcctggaagcagagttccgagccgccgtct
gccccctcagccaagcgacgaagaaggacgtcccctgggcccattatcatcatcaaagat
gaaccagaggacgaggatgaagttcattttgtgcagtccagcgttgggtccagcctgccc
gacagcagcactggggctcagtcaaagccccggctgcagcagaaggtgtctgtcccgaac
ctggtccctggatcagagtctaacgctgggaaagagcagtgtcctcagcccgtagctcag
ccagagtctgtgaagagagcggagccggaggaagatcccaacgaagactggtgtgccgtg
tgtcagaacggaggagaactgctgtgttgtgacaagtgtcccaaagttttccacctgtcc
tgccacatccccacgctgaacgagtcccccagtggggagtggttctgctcattctgccgg
gaccttgtctctcctgagatggtgtacgactccgacagaaaggaccacgccgcctctgat
ggattctcacctgtcgatagaaggagctgtgagaggttgctcctgcgtctgttctgcaat
gacttcagcactgacttccagcagcctgcttctccatcggagaccaaaaggtacaaagag
ctgattcagacgccaatggatttgtcgatagtgaagaggagacttgagtctaagtcgcag
gacggtgaatattatatgtgtccagagggatttgtcgcagatgtcaggctcatatttttc
aactgtgcaaaatactacaaggtgacgtcagaagtggggagcgcaggcttgtacttggaa
gactactttgaggagcagctgaagctcgtctacccagataagatcttccctggtgggagg
gaagagcagatgattcctcctttagaggacgagatagacgaagaagaagaagtgatggca
gaaaatgtggcacccgtggaggatctaaaaccacagagtcctgcaggacaaggaatccct
cctgtggaagaggatttggctccactggaagaagcgccagccacagaagagcagggacag
ttggaaactaaggagaaggcaaccgacacgagcgagaaggagacggaagagaagaagatg
aaggagacggaagagaaggagacggaagagaaggagacggaggaaatggagacggaaacg
aaggttgctgtcgctgaggatgccacttctccttcagaggaggtagagaaggatgagaag
actcctgtgaaggaggtgaacagctcttccgctgctgatagtgacacaaaagtcgctccc
tgctccccaaagaaagagaaccctgagctccccgcagaaaagactgtagatgctgctgaa
acccaggaggaggctgcagacacagccaaagaggagtcagcgtag
DBGET
integrated database retrieval system
