Paralichthys olivaceus (Japanese flounder): 109632990
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Entry
109632990 CDS
T06037
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109632990
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109632990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
109632990
NCBI-ProteinID:
XP_019948122
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MDQVLPSQSSAAGLLEPDSEELQLRVGSFRKLGYSSEEVRSALRKLGLSTDTNSVLGELV
RIRTSTAPWSSDGDERRGGLKDPLLPPSWANGPRITTQLGHQKNTETELRPIVIDGSNVA
MSHGNKEVFSCRGIQLAVNFFLDRGHCTVTVFVPSWRREQPRPDAPITDQHILMELERRK
IVVFTPSRRVGGKRVVCYDDRFIVKLAYDSDGVIVSNDTYRDLQGERPEWKKCIEERLLM
FSFVNDKFMPPDDPLGRHGPSLDNLLRKKPLPTETKRLLCPYDKKCTYGIKCKFYHPERA
NQSYLSLADELREKAQISTAKEEKKVTLSPRQLQPDTGPAHKAGSHPRDSNTELVRDGQS
SSYPSVTSENKLLYWEDPMKSFNHLLHSGQSQKDWPGLHSAPNHYYTNVSNEYLDSGFGS
FDSQYSDNLHGLSNSHRLKSQQQSGLTGTRHNNSSPSCRCCSHTGPSTAHPQHHRSLDSH
CHLSYAHMFPPAVPHHNSLPSPLHYGGAPHQQHNYWSDPFQGLPQATTSCSLPSSVHSSH
SHDSCCSYKGHEYHSWGQQPPAAFDPQRMELRKNLYTIFNPHLVDTVMEMFPHLMNAEKL
AEEILKLKTQRGIL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggtacttcccagccagagctcagctgcaggtctgctggaaccagacagcgag
gagctccagctcagggtgggctccttcaggaaactgggttactcctcagaggaggtcagg
tctgctctgaggaagctggggctcagcacagacaccaactcggtgctcggggagctggtc
aggatccggaccagcaccgcaccctggagttctgacggagatgagaggagaggcggacta
aaggaccctctcctgcctcccagctgggccaatggacccagaatcacgacacaactgggg
caccagaagaatacagaaacagaattgagacctattgtgattgacggcagcaatgttgcc
atgagccacggcaacaaggaagtgttctcctgccgaggcatccagctggcagtgaatttt
ttcctggatagaggccactgcaccgtcactgtgtttgttcccagttggcgacgagagcag
cccagacccgacgcccccatcacagaccaacacatcctgatggagctcgagagacgtaaa
atagtggtgttcacgccgtcgcggcgagttgggggcaagagagtggtctgctatgacgac
cgctttatcgtgaagttggcgtacgattcggacggagtgatcgtatccaatgacacctac
cgtgacctccaaggagaaaggcctgagtggaagaaatgcatcgaggagaggctcctcatg
ttctcctttgtgaatgacaagttcatgccccctgatgaccctctgggtcgccatggcccc
agtcttgacaacctcctgaggaagaagcctctgcctacagagacgaagaggctgctctgt
ccttatgacaaaaagtgcacttatggcatcaaatgcaagttttaccatccagagcgagcc
aaccagtcctacctctctttggctgatgaactgagggagaaagcccagatttctactgcg
aaagaagagaaaaaagtcacattatcacccagacagctgcaacctgacacaggacctgct
cataaagcaggttctcatcctcgagactctaacacggagcttgtgagagacgggcaaagt
tcctcatatccaagtgtcaccagtgaaaacaaactgttgtactgggaggatcctatgaag
agtttcaatcatttgctccactcaggccagagtcagaaagattggcctgggctgcactcg
gctcccaatcattactacaccaacgtctctaacgagtacctggattcaggcttcggttct
tttgacagccagtactctgataacttgcatggcctcagcaactcccacagactcaagtcc
cagcagcagagtggcctcactggaaccagacacaacaacagcagcccctcctgcagatgc
tgttctcacactgggccctcaacagctcacccacaacaccacaggagcctggactctcat
tgtcacctcagctatgctcacatgttcccaccagctgtgccacatcataacagcctcccc
agcccactccattatggcggtgccccccatcagcagcacaactactggtcagatcccttt
caggggcttccccaagccacaacatcatgcagtctcccctcttctgtccattcgtcacac
tcccacgactcttgctgctcctacaaaggccacgagtatcactcctggggccaacaacct
cctgctgcctttgacccacagaggatggagctccgcaagaatctgtacaccatcttcaac
ccacatctggtggatacagtcatggaaatgttcccacatctgatgaacgcagagaaactg
gctgaagagatcctcaagctgaagactcagagaggaatattgtga
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