Paralichthys olivaceus (Japanese flounder): 109633034
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Entry
109633034 CDS
T06037
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109633034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109633034
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109633034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
SWI2_SNF2
TusA
Motif
Other DBs
NCBI-GeneID:
109633034
NCBI-ProteinID:
XP_019948182
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MPPYCSCGVIQVSDHRIEQFVLSPLHSVLVISYEMLLRSQEQVQKVDFGLVICDEGHRLK
NSTIKTSSALSSLSCNRRVILTGTPVQNDLQEFYALIEFVNPGILGSLTAYRKVYEEPIL
RSRQPSCTEEERVLGEDRAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCDPSPLQLE
LYRHLLCHRVFRACLQGSTQTHTHLACITALKKLCNHPGLLYSTVKERLNHGSEESSIYD
GLVDLFPESYSSGGLNMTDSGKLLVLSDLLTAIRQLNPSDRVVVVSNYTQTLDLLQDFCV
HMGYTFCRLDGHTPTNKRQRLVDSFNSSYSPNFVFLLSSKAGGVGLNLIGASHLVLYDID
WNPANDIQAMARVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEH
TSFSSNELRDLFSLTDTPSLTHDLLNCSCSMDGSVQAAVEEEVPVFDRPCQLGRQGDRGG
VAVPKHLSMSELMQWRHFSGDTHTFADPYLDNARNHITFAFQTTISHTVNTHALQL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgtactgctcctgtggtgtcatccaagtgtccgaccacaggatagagcagttt
gtgttgtctcctctgcacagcgttctggtgatcagctatgagatgctgctgcgcagccaa
gagcaggtacaaaaagtggattttggtcttgtcatttgcgatgagggtcacagattaaag
aacagcacaattaaaacatcctctgctctcagtagcctcagctgtaatcgcagggtcata
ctgacaggcactccagtacagaacgacctgcaggagttttatgcgcttatagagttcgta
aacccagggattctcgggtcattgacggcttacaggaaagtgtatgaggagccaattctg
cgctccaggcaaccctcctgcaccgaggaggagagagttttgggtgaagaccgagcagct
gagctgtctcgcctgactggcatgttcatcctgagacggacgcaggagatcatcaaccgg
tacctgccccctcgtcttgactggacacttttctgtgacccatcccctctgcagctagag
ctttacaggcatctcctgtgccatcgagtcttcagagcctgccttcagggctccacgcaa
acacacacacacctggcctgcatcactgcactgaagaagctgtgtaaccaccccggcctg
ctctactccaccgtcaaggagagactaaaccacggatcagaggagagttcaatatatgat
ggattggtcgatcttttcccagaatcctactcgtcaggaggattgaacatgaccgattca
ggaaaactccttgttctgtcggacctgttgactgccatcagacagctcaacccttcagac
agggtggtcgtagtgtccaactacactcaaactcttgacttgctccaagacttctgtgtg
cacatgggctacaccttctgccgactagacggacacacgcctaccaacaagagacagcga
ctggtggacagtttcaacagctcctattctccgaactttgtgtttctcctgagctccaag
gcaggaggtgtgggacttaatctgatcggtgcttcccatctggtgctctatgatattgac
tggaaccctgccaacgatattcaggccatggctcgagtgtggagagatggacagaagaag
accgtgcacatctatcgtctcctcactgcaggaactattgaggagcgtattttccagaga
caggtctccaaacaggggctttctgggactgtggtggacctgggtaaaggcgctgaacac
accagcttctcctccaatgaactgcgagatcttttcagcttgacggacacgccgtctcta
actcatgacctgctgaactgtagctgcagcatggacggatcggtccaggcagccgtggag
gaggaggtcccggtttttgacaggccgtgccagctcggacgtcaaggtgaccgtggaggg
gtagctgtgccgaagcatctcagcatgtctgagctgatgcagtggagacacttctctggt
gacacgcacacctttgcagacccctacctcgataatgcacgaaaccacatcacattcgcc
ttccagaccaccatctctcacacagtgaatacacatgcgcttcagctatag
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