Paralichthys olivaceus (Japanese flounder): 109633816
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Entry
109633816 CDS
T06037
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109633816 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109633816 (ttc37)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
109633816 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_11
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
Fis1_TPR_C
TPR_15
PknG_TPR
COG4_N
Motif
Other DBs
NCBI-GeneID:
109633816
NCBI-ProteinID:
XP_019949487
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MFFTSVLANVKLVQVVNITVGGTNFYSHVRNLHGRQRPEPTKQSDHKMSSKEVKTELKSA
REAIKNKEYKDALRHCKAVLKLEKTNYNAWVFIGLAASEMEQPDQSQSAYKKAVELEPEQ
LLAWQGLANLYEKTDQWDFKVELPNIYQKLVDLYASSDKKKCYEVIKKLSDIYLSDEDYL
KLAKLWLQLIQLKEEEAVDKTELLQLWQEMIQHLSGCPNEVQDNETQQHLITAFENTMVL
LDPVPGEKHKKISADFINCLSKLPQEENKMKKACESMLAHYPNQSYPLEVLCSHYLKTGI
LNDDTISCFSRLLDLAPDSGLGHLGLGTKALQEGRYKDAIKDLSQGLKKMSCSTGWYSLA
EAQFKVHRYSDSATSCCQGLMPCASGDKELKVKLLRLQLETLVRSGGEKAADHALETFSQ
IPDAEKDQVLVAFKGRAYLNKGQIDQALKVSSELVASNPNLDQGLALRGLVHSAEGQQQL
AEQSFLKAAALSPNCGEYYFLLGQLYWDMGEETRKDRSKAHTHLLKAAKLDPHLGCVFRY
LGHYYRETANDRGRARGCYKKAFELDNEDSESGSASVDLSMEQEDMDTALATLESVIEKA
TPGSAKWAWMRRGLYYLKVGEHQQAISDLQAALRADPEDWVCWECLGEAYLNRRSFTAAL
KAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDYVPALKGLGECQLSL
AKGLMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACTTVSSVSLNRAQVLV
PALLAGLDPNSQRHVLNQAQTLKVGERCYARALKLMSEAPSLWYDLGLNYYHQAKLPSSS
EGDQNSQSLILEKAQQCFKKAIMMDCGNHSYWNGLGVISMNKGLENFALAQHSFIKSIQV
EPNNVVAWTNLGTLYLKKDNIELAHKAFKIAQSLEPLYVNCWIGQALIAEKVGSYDTMDL
FRHTTELSTHVEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAISAAQVVLCKYTERI
QSDPEAFIMLGYLNEHLQLKRQALQAYQRAVELLQSTSSAEELTFALGRYGRALCTSGQW
EEAVQVYNSTPLQELSDLTGLALAYYRAGLIPESTNAYERALAVASSEKEKAYILTALAL
LQHRQGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHGDVTLAAAALTELLKQGTATG
SVVEQRCLLTCTLLVLKGNYSAVQREASRAVHSNPGNPSLWALLSRVIPQYYPRKANGGA
VAGHVACLSSMTQGKRALLYSGVNQLAIGRHSGEDVHRNALKTMQRAVLLCPDDPAAWAG
LMAACHTENTTCYLSGSAPSRQGLEKVLMSVVSEKVQSVEEIERPLAQSLEGWVLQQAVT
GLMLGGELEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLVADGGNVLPDSVLEQLSNT
VMMNSTNIGAWHWLAEVYRRQGLLVQAVMAYRQSLQLALQLGLHSGQVASLLRLALLALG
PCMAGTPGNEWKDLVVEATTEVLKLGSSPVANLFQALLQYVTKMAARDTRRLLERLVYVS
SPDFPVTVVQVASWYFLRHLYAKNDQELINVLLQHAKMKGNQRLLEFSVLLEDASS
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcacttccgtgttagcaaacgtgaaactggtgcaggttgtcaacatcacagtg
ggtggcaccaacttttattcacatgtacgaaacctacatgggagacagcgacctgaacca
actaaacaaagtgatcacaagatgtccagcaaagaagtgaagacagagctgaaaagtgcc
agagaggccattaaaaacaaagagtacaaagatgctctgagacactgtaaggctgtttta
aaactggagaagaccaattataatgcctgggtgttcatcggcctggcagccagtgaaatg
gagcaaccagatcagtcccagtcggcctataaaaaggcagtggagctggagcctgagcag
cttctggcatggcagggcttagccaatctttatgaaaagacagatcagtgggatttcaaa
gttgagctgcccaacatttatcagaagcttgttgatctatacgccagctcggacaaaaag
aaatgttacgaggtgatcaaaaagttgtcagatatttatctgtctgacgaagattattta
aagctggcaaagctttggctgcagctcattcagctgaaagaggaagaagctgtggacaag
acagagttactgcagctgtggcaggagatgatccagcacctctcaggctgccctaatgaa
gtgcaggacaatgaaacacaacagcatttaatcacagcttttgagaacaccatggttctc
ttggaccctgtaccaggagagaaacacaagaagatctcagccgactttattaattgtctc
tctaaactgccacaagaagaaaacaaaatgaaaaaggcttgtgagtccatgctcgctcac
taccccaaccaaagttatcctcttgaggtcctttgttcgcattacctcaaaacaggtatc
ctgaatgatgatacaattagctgcttctcccggctcctggatctggcccctgactctggg
ttaggtcacttgggtcttggcactaaagcacttcaggaaggaagatataaagacgccata
aaggacctttcacaagggttgaagaagatgagctgtagcacaggatggtacagtctggct
gaagctcagtttaaagtgcacagatactcggacagtgctacgtcatgctgccaaggtctg
atgccgtgtgcttctggagacaaggagctgaaggtcaaactgctgagattgcagctcgag
actttagtcagaagtggaggagagaaggctgcagatcatgctttggagaccttttcacaa
attccagatgctgaaaaagatcaagttctagttgcctttaaaggacgtgcatacctgaac
aaaggacagattgatcaagcacttaaggtgtcatcagagcttgtggcctccaacccaaac
ctggaccagggtctagctctgagaggactggttcattcagctgaaggtcagcagcagctg
gcagagcagagtttccttaaggcagctgccctgagcccaaactgtggagagtactatttt
ttgctgggacagctctactgggacatgggagaagagacccgcaaagacagaagcaaagct
catacacacttgctaaaggctgcaaagttagatccacacctcggctgtgttttccgttac
cttggccattactacagggagacagctaacgatcgtggtcgtgcacgaggctgttataag
aaggccttcgagttggacaatgaggattctgagtctggaagtgcctcagtggatctcagt
atggagcaggaggatatggacactgccttagcaacactggagtcagtgatagagaaagcc
actcccggttcagctaaatgggcctggatgagacgaggcctttactacctgaaggttggg
gagcatcaacaggccatctctgatctgcaggcagctctgagagcagacccagaggactgg
gtgtgctgggagtgtttgggtgaggcctacctaaaccgccggagcttcactgctgcgctg
aaggcatttggtaaggcccatcaacttcagccctcctccatctacagtgtttaccaggct
gccgcgatcaaacagaccctgggcaagttcaaagaagcggttgcagagtacttgcagatc
acagcacagcaggactatgttcctgctcttaaaggacttggggagtgccagctgtctctg
gcaaaaggtttgatggaggactgcagagatgggggagccattgacctcattcagcaagct
atacagaacctcttcagagccgtggagctgcgtccagacctgtcctgcttatggaagcta
ctgggagatgcatgcaccacagtcagcagtgtttcgctaaacagagcacaggttcttgtg
cctgccctgttggctggtttagaccccaactcacagaggcatgtgctgaaccaggcccag
acactcaaagtgggcgagaggtgctatgcccgtgctttgaagctgatgtctgaagccccc
agcctttggtatgacttaggactcaactattatcaccaggcaaaactgccaagctcttca
gaaggagaccaaaactcccaatctctgatcctagagaaagcccagcagtgttttaagaaa
gccatcatgatggactgtgggaaccatagctactggaatggcctgggggtgatttctatg
aacaaaggtcttgagaactttgctctggctcaacattccttcatcaagtccatacaagtt
gagccaaataatgttgttgcctggacaaaccttggcaccctctatttgaagaaggacaac
atagagcttgcacacaaggccttcaagattgcacagtccttggagccgctgtatgtcaac
tgctggattggacaggcgctgatagcagagaaagtgggaagctacgacaccatggatctt
ttcaggcacaccactgaactcagtacacatgtggagggagttaaaggttatgcctactgg
gtatgttccaccttgctagataagagcaacagagactctgaactgtaccgctacaacata
gtccagatgaacgccatctctgctgctcaggtggttctctgcaagtacacagagaggatc
cagtctgatcctgaagccttcattatgctgggatacctgaatgagcatctgcagctgaag
agacaagccttacaggcttaccaaagagctgttgaactgctgcagtccacgtcctcagca
gaagaactgacttttgctctgggcagatatggccgcgctctgtgcacctcaggccagtgg
gaggaggccgttcaggtttataattccactccactccaggagctcagcgatctcactggg
ttggctctggcgtactacagggcaggactcattccagagagcaccaacgcctatgagcgt
gccttggctgtggcgtccagtgagaaggagaaagcttacatcctgacagctctggccctg
ctgcagcaccggcagggcaatctggactcagccaagactctgctgtttaaatgctcaatg
ttaaaggagccaatctcggagtctctgctgtgtttatgtgccctggggttagtccacggt
gatgttacactagctgctgctgccctgactgagctgcttaaacaaggtacagccactggg
agtgtcgtagagcagcggtgtttactcacctgcaccttgcttgtcctgaagggcaactac
agtgcagtgcaaagagaggcctccagagctgtacacagcaatcctggaaacccctctctg
tgggccctgctgtccagagtgataccacaatactatcccaggaaggcaaatggtggagca
gtggctggtcatgttgcctgtctctccagtatgacccaaggaaagagggcgctgttgtac
agtggagtgaaccagctggctatcggaagacactctggagaggacgttcacaggaatgca
ctgaaaactatgcagagagctgtgctgctctgtcccgatgatccagcagcatgggcggga
ttaatggctgcctgtcacacagaaaacacaacctgttatctctcaggttctgctcccagc
agacaaggactggagaaagtcctcatgtcagtggtttctgagaaagtgcaaagtgtggag
gagatagagcgccctctagcccagtctctcgagggatgggtactacaacaggcagtgact
ggtctgatgttagggggagagctggagcaggcagaagccctctgctcacaggtcctaaat
gtttcgccagaacacccagcagtgatgctgtcactgagacaggtgcaatgtcagcgcctc
cttgtggcagatggtggtaatgtcctcccagactcagtgctggagcagcttagcaacacg
gtgatgatgaactccaccaacatcggagcatggcattggctggctgaggtgtatcgtagg
cagggtcttctggtgcaggcagttatggcttacaggcagagtctgcagcttgccttacag
ctcggcctgcacagcggtcaggtggccagcctcctccgattggccctgctagctctagga
ccctgtatggcagggaccccaggaaacgagtggaaggatctggtagtagaagccactact
gaggttttgaagctaggctcatcccctgtggctaacctcttccaggccctgctccagtat
gtgaccaagatggcagctagggacacgagacgtttgttggagaggctggtgtacgtttcc
tctccagactttccagtgacagtggtgcaggtggccagctggtactttctcagacacttg
tatgccaaaaatgaccaggagctgataaatgtgctcttgcaacatgccaaaatgaaggga
aatcagagactgttggaattcagtgtactccttgaagacgcctcgtcttga
DBGET
integrated database retrieval system
