Paralichthys olivaceus (Japanese flounder): 109633828
Help
Entry
109633828 CDS
T06037
Name
(RefSeq) zinc finger BED domain-containing protein 1-like isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109633828
04121 Ubiquitin system [BR:
pov04121
]
109633828
Transcription factors [BR:
pov03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109633828
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109633828
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
109633828
NCBI-ProteinID:
XP_019949502
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MKRTGRRRSSVWDCFEQVGNFVRCMKCDATLKYCGGATSTMMNHMSRHHPYIAPLDEDEK
PVICTVQCSSEEESAANNQDIMQVNIMSPNVAANIHERDYGERKRLKRSSVWDIFIKVDD
EVHCTMCDTKLKYRSSTTSMMYHIKNKHPDTMPNDGVSLATHAEVTELISRMIEKDMLPI
SVVSGDGFRELLAYTVHNYKMPSAGDITRLIEGHFHEKVEELVVQLGRVEKVALTAEFWT
ALPFQRYITVSCSFITEEWQGRSAVLQTHKLSSDSHPTTDSVTEKLLNTVKTWGIPGKVT
ACVHNNTQDILSARACSRVSWDYATCFATTLQQAVSDGLSEDLVRIIIAAGKLAKHFSYN
ILASEALGQKQVQMCLPQHKLIQSSKARWDTICDMFERLLEQRWAIKAVLSDRTVTNRQE
AQALEIEDDCWQIIENFTPVLATLKWATTVISAETEVSISNIYPITFSLIQTHLVPREND
VEQVSEFKLKVQTSLRSHMEVDSNDLSSKPALIASMLDPRHKHLSFLTPTGRLAAKVKLH
ELVSKLDVITTTVGPKDEQQETLITPDISQVAMPSQMRSDTKNTMMLLLGDNYSSSYATD
SEAQVDYYLRDIAPSLDINPLDWWRVNGPRFPKLATLARHYLCVPGVSLPSLLSESGQAF
ATMRTRLSPEHVDMMIFVNRNA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggaccggcaggagacgcagctcggtgtgggactgcttcgaacaagtgggcaac
ttcgtccgctgcatgaaatgcgacgcgacgcttaagtactgcggcggagccaccagcacc
atgatgaaccacatgagcaggcaccatccgtacattgcgccgctggacgaggacgagaag
ccggtgatctgcaccgtccagtgcagcagcgaggaggagagcgccgctaacaaccaggac
atcatgcaggtcaacatcatgtctcccaacgtggccgccaacatccacgagcgagactac
ggggagaggaagcgcctgaagcggagctccgtgtgggacattttcatcaaagtggacgac
gaggtccactgcaccatgtgtgacaccaaactgaagtacaggagcagcaccaccagcatg
atgtaccacatcaagaacaagcacccggacacgatgcctaacgacggggtgtcactggcc
acacacgccgaggtgactgaactcatctccaggatgatagagaaggacatgctccccatc
agcgtggttagcggggatgggtttcgagaactactggcatacacagtgcataattataaa
atgccctctgctggtgatatcacacgtcttattgaaggacacttccatgagaaggtggag
gagctggtggtgcagctgggtcgagtggagaaagtggctctcactgctgaattctggaca
gctctgcccttccaaagatacatcacagtgtcctgctcgttcataacggaggagtggcag
ggcaggtcagctgtgctgcagacacacaagctgtcatcagacagccaccccactacagac
agcgtcacagagaagcttctcaacaccgtgaagacgtggggtatccccgggaaagtgacc
gcgtgtgttcataacaacacacaagacattttatcagcgcgtgcgtgttcccgtgtcagc
tgggactacgccacttgctttgccacaacactgcaacaggcagtgagtgatgggctgagt
gaggatttagtccgcatcataattgctgcagggaaacttgccaagcacttcagttacaac
atcctggcgagtgaggccttgggacagaagcaggttcagatgtgcctgccgcagcacaag
ctcatccagtccagcaaagctcgatgggacacgatctgtgatatgtttgaacgcttactc
gagcaaaggtgggctattaaagccgtgctgtccgaccgcacagtcaccaacagacaggaa
gcccaggcccttgagattgaagatgactgctggcaaataattgagaatttcacacctgta
ctggcaacactgaaatgggcaacgacagtcatatctgctgaaacggaggtgtccatttca
aacatctacccaatcacgttcagcctcattcagactcaccttgtgccaagagagaatgat
gttgaacaagtttctgagtttaagctgaaagttcagacgtcacttagaagtcacatggag
gtcgactctaatgacttgtcgtccaaaccagctctgatcgcctcgatgctggacccacgt
cacaaacatctcagcttcctgacgccaacagggagactggctgcgaaggtcaaactgcat
gagctggtttcaaagttagatgtcataactaccacagtggggccaaaggatgaacagcaa
gaaaccctgatcacgcctgatattagccaggtggccatgccctcacaaatgagaagtgac
accaaaaacaccatgatgttgctcctcggagacaactacagctcctcctatgccacagac
tccgaggctcaggtagattactacttgagagacattgccccctcattggacataaacccc
cttgactggtggagggtaaatggaccgagattccccaaactggcaactctggcaagacac
tatttgtgcgtacccggcgtgtcgctaccgtctttgttgtctgagtctggacaagcgttt
gcaacaatgcgtacaagactgagcccagagcatgttgacatgatgatctttgtaaacaga
aatgcataa
DBGET
integrated database retrieval system
