Paralichthys olivaceus (Japanese flounder): 109634039
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Entry
109634039 CDS
T06037
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
109634039 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pov04054
]
109634039 (dhx58)
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109634039 (dhx58)
Pattern recognition receptors [BR:
pov04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
109634039 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
FrhB_FdhB_C
PhoH
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
109634039
NCBI-ProteinID:
XP_019949839
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MAELGLYSYQQEVVERAIKGENVIIWLPTGGGKTRAAVYVAKRHLETTQHAKVVVLVNKV
HLVDQHYTKEFKPHLGSNYTLVPVSGESELKDLFGKVVQDSDVVICTAQILYNALTNSEE
TKHVELSDITLLIFDECHHTHKGGVYNQIMKCYVEKKLKGERRLPQILGLTASPGTGGAR
ILEKAVEHVLQICANLDSSIVSTRLYAPELKKKVPRPIKTFDIVETRPEDPFGNHLKRMM
QMIQDYMNLPTSDFRLRECGTQEYEADVVILEQRGIREDNRRLAQCALHLRQYNDALLIN
DTLLMMDAYRNLEEFYISKSTRAIDKTDFFLVGIFQDNQADLMKVARDSRYENPKMAKLE
SVLLKQFSSGLQSKGILFSKTRKSIHCLNEWVLNNRALQEAGVKSAILTGAGNGITYMTQ
HEQADTICRFRQGTLNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARAQDS
QYSVVALKGGREERREITNEYLEELTAKAIAQVQDMSIREFQRKITELQTQAVIKSRIEE
SCKMQKRSRYTASSIQLLCRNCFKSVASGSDIKLIDNVHHVNVNPAFEKHYKVGGQVILP
KMFDDWEPGRIISCNNGNCNKEWGFEMKYKEIALLPNLAIKHLFLQTPDGRMTVKKWKDV
PFTVDNFSFEEYCQDNFPDLLD
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttgggactgtattcataccaacaggaagtggttgaaagggctattaaggga
gagaacgtgattatctggttgccgaccggaggtggaaagacccgagctgctgtgtatgtg
gccaagagacacctggaaaccacacagcatgccaaggtggtggtcctggtcaacaaggtt
caccttgtagaccaacattacaccaaagagttcaagcctcatctgggctccaactacacc
ctggtgccagtgagtggagagagcgagttgaaggacctcttcggaaaagtggtgcaggac
tcggacgtggtcatctgcacagcgcagatcttatataacgctctgaccaacagtgaggaa
accaaacacgttgagctctcggatatcactctacttatatttgatgagtgtcaccacacc
cacaaggggggggtctacaaccagatcatgaagtgctacgtggagaaaaagttgaaagga
gagcgccggttgccgcagatcctgggtctcactgcatcgccggggacggggggcgctagg
atcctggagaaggctgtggagcacgtcctgcagatttgtgccaacctggactcatccata
gtttcaaccaggctctatgcccctgagttgaagaagaaggtgcctagacccatcaagaca
tttgacattgtcgagaccaggcctgaggatccgtttgggaatcatctgaagcggatgatg
cagatgatccaagactacatgaacttaccaacttcagacttcagactgagagagtgtggc
acgcaggagtatgaggcagatgtggtgattttagagcagcgagggataagagaggacaac
agacggcttgcacaatgtgctctccacctcagacagtacaacgatgccctgctcatcaac
gacaccttgcttatgatggatgcttaccgcaacctggaggagttctacatctctaagtcc
accagagccattgacaaaacagacttcttcctggtgggaattttccaagataatcaggcg
gatttgatgaaagttgcaagagattctcgctatgagaacccaaagatggccaaacttgag
agcgttctgctgaaacagttcagttcgggtttgcagtccaagggaatcctcttcagcaaa
acacgtaaaagcatccactgcctgaatgaatgggtcctcaacaacagagccctacaggaa
gctggcgtcaagtcagccatcctgactggggctggcaacggcatcacttacatgacacag
cacgagcaggctgacacgatctgccgtttccgccagggcactctcaacctgctaatctcc
accagcgtggctgaggagggccttgacattcctgaatgcaacctggtggtgcgctacggc
ctgcttacaaatgagatcgcccagcagcaggcaagcggacgcgccagagcacaagacagc
cagtattcagtggtcgccttgaaaggggggcgagaggagcgcagagagatcaccaacgaa
tatctggaggagctgacagcgaaagccatcgctcaggtccaagatatgagcatcagagag
tttcaaagaaagataactgaattacagacacaagcagtcattaaaagtagaattgaagag
agctgcaaaatgcagaagaggagtcgctacaccgcttctagtatccagctcctgtgtcga
aactgtttcaagtctgtggcctccggcagcgacattaaactcatcgacaatgtgcaccat
gtcaatgtcaatcctgcctttgagaaacactacaaagtgggagggcaggtgattttacca
aagatgtttgacgactgggagcctgggcggattatcagctgcaataacggcaactgcaac
aaggaatggggatttgagatgaagtacaaggagatcgccttgctgcccaatctagccatt
aagcatttgttcctgcagacacctgacggcaggatgactgtgaagaagtggaaggatgtc
cctttcactgtggacaacttcagctttgaagaatactgccaagataacttccctgacctc
ttagactga
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