Paralichthys olivaceus (Japanese flounder): 109634879
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Entry
109634879 CDS
T06037
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov02010
ABC transporters
pov04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109634879
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109634879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pov02000
]
109634879
Transporters [BR:
pov02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109634879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
109634879
NCBI-ProteinID:
XP_019951227
LinkDB
All DBs
Position
Unknown
AA seq
2248 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVELIWPLFLFLILVWVRTTNKPIYKSQCHYPNKA
MPSAGLLPWLQGMICNINNPCLNYPTPGETPGQVNNFNNSIISGVLIELQSLLENRSILR
KAQLLADDIDQWSSVLSQSNPGNAQPVTLKNVLRDDETFSTHLKENLSVPPAVVESLLNA
TMNLNPALGIPRPGNLRTILCEGTGLDEYVQFSSQAEKEAFQNVSCSLTQQQLINTQQVL
RQNLDVRKILSELPSSLGLNAADTVKLVGETTQNALPVIEEMARLQSSMVFQAAGSLNFQ
EDMIGSINMLLCGKQPDFNSTNMTLSLRSPGQMDNNKSISIMGNSSDAFCQTFVDTLEST
PGLRNIWSTFKPLLQGKVLYTPDTPAARLMVNKANGTFNALAMLKELADSWDELGPRVWD
FFQNSSQVNAIRDLLANPVFAAALNQRLSGTGWTAELLANFLYNGPPEDRPPGMPLTDWR
DAYNATTQILKLLSNFLGCLDLNKFEAVPTEGHLVSKALELLKNDTYWASVVFENLQPNS
SQPPPYVKYKIRMDVDEVERTNKVKERLWSPGARDNSFNDLRYIWGGFAYLQDMMDHGII
QVQTSKTQPLGVFAQQMPYPCFVDDVFLRSLARSLPLYMTLAWIYSVAMIVKSIVGEKEA
RIKETVRIMGLRSAIYWLSWAVSSVLLLAVSAILLALILKYGKVLQYSDPSVIFVFLLVF
CLATITQCFFISVFFSKANLAAACGGLIYFVLYLPHILCYAWRDVMGFRAKVAVSLLSCV
AFGYGCESFSKYEEQGIGIQWHNINKSPEEGERYTFLLSIIMMLFDSAVYWILTWYIENV
FPGQYGIPKPWYFPFTASYWCGRASVTHVDPGFLKDYNVHHEYLEKTPSNMKAGVSVRNL
VKIYKTGKKLAVDGLTVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDI
LTDMDRIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGHSRDEVKIEMDQMIKDVGLPHK
RKELAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTII
LSTHHMDEADILGDRIAIISHGKMRCCGSSLFLKKCFGSGYYLTLVRDGTDKMAAQRNGI
IHSQTAEEKDYPSRSSLDDGIGSQSWSSSDPSDLTAVGQLVRRHVPEAVFLESIGQEITY
ILPYSGARDGTFALLFKELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDADIQTTEE
PVVRDRERSSRKSKRNSIASIHTTSAQPKQVSGMSELKERFTSKIEDLKRNTPVSGRGST
VITGWELIRRQFLALFIKRFHHARRSRKGVIAQVVLPSFFVCMSLIFSLILPPFAEYPSL
ELQPWMYDLPQTTFYSNDGPNNVEVSQVVETLVNNPGFGTRCMNGNPIPMLPCSSRGSDW
FTPPADQSVSDIFLNGNWSMSNPSPSCQCSTPKRTIMLPDCPPGAGGLPPPQRIQNTTDT
LEDLTGRNMTDFLVKTFEHSGKTRYGGVSVGGVNSQVRLTEDAIEVAFRDLRDLFSSFQD
NVTDELLQKSEMLLKKLGTKDNVKVWFYNQAWHGMVSFLGVANNAILRGNLPAGEDPHQY
GISVSNHPLNLTKEQLSFVALATTSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHL
QFVSGVNPAVYWLANFAWDMCNYIIPCLIVIVIFLAFQQKAYVSPPNLPALILLLVFYGW
SITPMMYPASFIFSVPSTAYVVLTCVNLFIGINGSVATFFMELYDDDNVSRINDIVKQVL
LIFPHFCLGRGLIDMAKNQAMATLFSSFGEDRFENPLSWEMVGKNLCAMSIQGFVMFAIT
ILIQYKFFCKPRLISGKSLSAEEEDIDVARERERVYEGKAQNDLLRICDLTKVYSRKSTP
AVDRLCVSVPAAECFGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMSEVHQN
MGYCPQFDAIDDLLTGREHLEFYGRLRGVPEHEVTMVAEWGIQKLGLVKYSNKSAGTYSG
GNKRKLSTAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIREGRSVILTSHSMEEC
EALCTRMAIMVNGSFKCLGSIQHLKSRFGDGYTVIVRVGGSPPVLKPVEDFVQQTFPGSV
LKEKHHNTLQYQLPYTQGALATIFSLFTSHQQGLGVEDYSVSQTTLDQVFVNFARHQHIE
EEAQGYDNPVDTSDEQPSLKNSQEAEKV
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctgcggaagaga
caaaaggtgcgactggtcgttgaactgatatggcctctgtttctcttcctaatactggtc
tgggtgcggaccaccaataagccaatttacaaaagccaatgtcactatccaaataaagcc
atgccatcagccggcctgctgccgtggcttcaaggtatgatctgcaacatcaacaacccc
tgtttgaactacccgacgcctggggagactccaggccaagtcaacaacttcaacaactcc
ataatatctggtgtgttgatagagctgcaaagcctcctggagaacagatctattctcagg
aaggcacagttgctggcagacgacatcgaccagtggtcttcagtcctgtcacagtcgaac
cctgggaacgctcaaccggtgaccctaaagaatgttctgcgagacgatgaaactttctcc
acacacctgaaagagaacttgtcggtcccaccagcagttgttgaaagcctcttaaatgct
acaatgaacctcaacccagcactgggcatcccacgaccaggcaacctgaggacgatcctg
tgcgaggggaccggtctggatgagtacgtccaatttagcagccaagctgagaaggaggct
tttcaaaatgtcagctgctccctcactcaacagcagctgattaacacccagcaagtgctc
cggcaaaacctggatgtgaggaaaattctgtctgagttgccctcatctttaggcctgaat
gcagcagataccgtgaaactggtgggggaaaccactcaaaacgctttaccggtgattgag
gagatggcgaggttgcagagctccatggtctttcaggctgccggttcattgaatttccaa
gaagacatgattggcagtatcaatatgctactgtgtggaaagcagcctgacttcaactcc
accaatatgaccctcagcttacgctcacctggacaaatggataacaacaagtcgatctcc
attatgggcaacagttccgatgctttttgtcagacctttgtcgacaccctggagagcaca
cctggtctgcgcaacatttggagcacgttcaagccgttattacaaggcaaagtcctctac
acacccgacacacctgccgctcgcctcatggtgaacaaagcaaatggcacattcaacgcc
ctggctatgttgaaggagctggctgattcgtgggatgagcttgggccacgcgtctgggat
ttctttcaaaatagctctcaagtgaatgcaatacgggatctgctggcgaacccagtgttt
gctgctgccctcaaccagcgtctcagtggcacaggatggacggccgagctgctggccaac
ttcctgtacaatgggcccccggaggatcgtccacctggtatgcccctcaccgactggcgg
gatgcttacaacgccaccactcagatcctgaagctgctctccaacttccttggctgttta
gacctgaataagtttgaggctgttcccaccgaaggccatctggtgagcaaagcactggag
cttctgaagaacgacacgtactgggccagtgtcgtctttgaaaacctgcagcccaactcc
agccagccccctccttatgtcaaatacaaaatccgcatggacgttgatgaagtagagcgc
accaacaaagtaaaggaaaggttatggtctcctggggcccgggacaattcctttaacgac
ctgcgctatatatggggaggcttcgcctacctgcaggatatgatggaccatggcattata
caagtgcaaacgtcaaagacccaacccctcggagtttttgcccagcagatgccatacccc
tgtttcgtggatgacgtgttcctccgctctctggctcgctcgcttcccttatacatgacg
ttagcctggatctactccgtggccatgatcgttaagagtatcgttggtgagaaagaggcg
aggatcaaggagacagtgaggatcatgggcctgaggagtgccatctattggctgagctgg
gcagtgtccagtgtgcttctgctggctgtcagcgccatcctcctcgcccttatactaaag
tacgggaaagtgctgcagtacagcgacccctcggtaatcttcgtcttcctgctggtgttc
tgtttggccaccatcactcagtgcttcttcattagcgtcttcttctctaaggccaactta
gcggcggcgtgcggcggcctcatctactttgtcctctatctgccgcacatcctctgctac
gcctggagggacgtcatgggtttccgggccaaggttgctgtgagtttattgtcatgtgtg
gccttcggctacggctgtgagagcttctcaaagtacgaggagcaaggcatcggtattcag
tggcacaacatcaacaagagtccagaggagggcgaacgctacacgttcttactgtccatc
atcatgatgctctttgattctgctgtatactggatcctcacctggtacattgagaatgtt
ttcccaggccaatatggaatccctaagccatggtacttccctttcactgcatcttactgg
tgtggcagagcctcagtgactcatgttgaccccgggtttttgaaagactacaacgtacat
catgaatatctggagaaaacgccgtccaacatgaaggcaggggtctcagtccgcaatctt
gtcaaaatctacaaaacaggaaagaagctggccgtagacggactaactgtggacttctat
gagaatcagatcacatctttcctcggccacaacggagctggaaaaacaaccacaatgtca
attctgacaggactgttcccgcccacatcaggcacagctctcatcaatggatatgacatc
ctcactgacatggacagaatcaggaagtatttgggaatgtgcccacagcacaacgtctta
ttcaatgagctgacagtggaggagcacatctacttctacgctcggctgaaaggacacagc
cgtgatgaggtgaaaattgagatggaccagatgattaaggacgttggtttaccacataag
aggaaggagctcgctaagaacctgtcaggtggcatgcagaggaaactctccgtggctata
gcgtttgttggaggctcaaaaatcgtcatcttagatgaaccgacagcaggagtggacccc
tacgcccgcaggggtatctgggaactactgttaaaatacaagcaaggtcgcaccatcatt
ctgtccacgcaccacatggatgaggcagacattttaggtgaccgcatcgccatcatctcc
cacggcaagatgcgttgctgcggctcctcgctcttcttaaagaaatgttttggcagcggc
tattacctcaccctggtccgagacgggactgacaagatggcagctcagcgtaatggtatc
atccacagtcagactgcagaggagaaagactatccttcgaggagcagcctcgatgatggc
atcgggagccaaagctggagcagctccgatccctcagatttgacagctgtgggtcaactc
gtgcggcgccacgtccctgaggcggtcttcttggagagcatcggtcaagagatcacctac
atactgccctatagtggagccagagatgggacctttgctctgctcttcaaagagctcgac
ctggccatggctgacctcggcctgactagctatggtatctctgataccacactggaggag
atatttcttaaagtggcagaagacactggagtggacgcagacatacaaacaacagaggag
ccggttgtgagagacagagagagaagctcccgcaaatccaagcgtaacagcatcgccagc
atccacacaacatccgcacaaccaaaacaagtctctggaatgagtgagttgaaggaacga
tttacaagtaaaattgaagacttaaagaggaacacccctgtcagtgggaggggatccacc
gtcatcaccgggtgggagctgatcaggaggcagttcctggcgctctttatcaagcgcttc
caccacgcccgcaggagccgcaagggagtcattgcccaggtggtcctgccttctttcttc
gtgtgcatgtctctgatcttctcactcatcctcccgccattcgctgaatatcccagtctg
gagctgcagccctggatgtatgacctacctcaaaccacattctacagcaatgacgggcca
aacaatgtggaggtgtctcaggtggtggaaacgctggttaacaaccctggatttgggact
cgctgcatgaatggaaacccgataccgatgttaccatgttcctctcgtgggtctgactgg
ttcacgccacccgcagatcagtcggtcagcgacatcttcctcaacgggaactggagcatg
tctaacccctccccttcctgtcagtgcagcacacctaaacggaccatcatgttacccgac
tgtccccctggagcaggagggctgcctccacctcagaggatccagaacacgaccgacaca
ttggaggatttaactggacgcaacatgacagacttcttagtcaagacttttgaacactcg
ggtaaaacgaggtacgggggtgtatctgttggaggagtcaactcacaagtccgtctgact
gaggacgctatcgaggttgcattcagggatctaagagaccttttcagttcatttcaggat
aacgtcactgatgagctcttacagaagtctgagatgctgctgaagaagctgggaaccaag
gacaacgttaaggtgtggttctacaaccaggcatggcacggcatggtgtctttcctcggt
gtggccaacaatgctatcctgaggggaaatctgccagcgggagaggatccccaccagtac
ggcatctctgtgtccaatcaccccctcaacctcaccaaggagcagctctcctttgtggcc
ttggccacaacctccaccgacgtggtggtgtccatctgcgttatcttcgccatgtccttc
atccctgccagctttgtcctcttcctcatccaagagcgggtgaacaaagccaagcatctg
caatttgtcagcggagtaaacccggctgtgtactggttggccaattttgcctgggacatg
tgtaactacatcatcccgtgtttgattgtgattgtgatcttcctcgccttccaacaaaaa
gcctacgtctcgcctcctaacctgcctgcgctgattcttctgctcgttttctatgggtgg
tccatcacccccatgatgtaccccgcctccttcatcttcagcgttcccagcacggcctac
gtggtgctgacctgcgtcaacctcttcattggtatcaacggcagcgtggccaccttcttt
atggagctctatgatgatgataacgtctcccgcatcaatgacatagtgaagcaggtgctg
ctgatattccctcatttctgtctgggcagagggctgatcgacatggccaagaaccaggca
atggccacgctcttcagcagctttggcgaggaccgtttcgaaaatccgctcagctgggaa
atggtgggaaagaatctttgcgccatgtccatccagggatttgtcatgtttgccatcaca
atcctcatccagtataagttcttctgcaaaccaaggcttatttctgggaagtcattatct
gcagaggaggaggatatcgatgttgcacgggagcgtgagcgagtttatgaaggcaaagcc
cagaatgaccttctgaggatctgtgacctcactaaggtatactctcggaagagcaccccc
gctgtggacagactatgtgtgagtgtacctgctgcagagtgtttcggcttgctgggaatc
aatggggctgggaaaaccaccacgttcaagatgctgacaggagatatcccagtctctggt
ggggaggccttcctaaacggatacagcatacggacagagatgagcgaggtgcaccagaac
atgggctattgtccgcagtttgacgccattgatgacctgctcactggacgagaacatctg
gagttttacggcaggttgcgaggagtgccagagcacgaggtcaccatggtggcagagtgg
gggatccagaagttggggctcgtcaagtattccaacaaatcagcgggaacttacagcggc
gggaacaagcgcaaactttccaccgccatagctctgatcggttgtcctccagtcatcttt
ctggatgagccgactactgggatggatcctaaggcccgccgtttcttatgggactgcatc
ctgagtgtcatcagagagggacgctcagtcattctcacttcacacagtatggaggagtgt
gaggcgctgtgcacacgcatggccatcatggttaatggcagcttcaagtgtctcgggagc
atccagcatctgaagagcagatttggagatggctacacggtgatcgtgagggtcgggggc
tcccctcctgtcttgaagcccgtcgaggactttgtgcagcagaccttcccgggcagcgtc
ctgaaggagaagcatcacaacacgctgcagtatcagctgccgtacacacagggtgcactg
gccaccatcttcagcctgttcaccagccaccagcaggggctcggtgtggaggactactct
gtgtcacagaccactctagatcaggtgtttgtgaattttgcgaggcaccagcacatagag
gaggaggcccagggctacgacaacccggtggacacctcagatgagcagccatctctgaag
aactcccaagaagcagagaaggtgtaa
DBGET
integrated database retrieval system
