Paralichthys olivaceus (Japanese flounder): 109634915
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Entry
109634915 CDS
T06037
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109634915 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109634915 (polr1b)
Enzymes [BR:
pov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109634915 (polr1b)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109634915 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
109634915
NCBI-ProteinID:
XP_019951325
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MDFSTKWSNLPTGPSLKNLTQGGFGVLKETQHEAVQDLTKAHIESFDQAVTGGLSRVVQA
IPPLEFTVNNDRISLSFVEASINNPVVAKGNVCRDMRVFPAECRGRRCSYKGKLVADVSW
SVNGIPKGIIKQSLGQVPIMVRSKLCNLYGMSPKELVEHHEEAEEMGGYFVVNGNEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISIHCVKEEHTAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIFQELIKGREDNSFYKSCASEMLRIVMEEGCTTRSKV
LNYLGERFRVKMNLPEWYTNEQCANFLIDECICIHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKERVAAWLVSVKLAFDKRGSRLSGGWNAENMIKLF
NMGGDVTKPFEYLLATGNLNSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTSSTTTMPALLCSLGVI
PVDGSPGQPFSDCYPVVLDGAVVGWLETELAPVVVDSLRSFKVLRVNKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVRNLALGKEELIGTFEQLYINVGIFEGEIEPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVRGEDAVVFGTKPGDPKVDGRLDADGLPHIGSTLKYGDPFYSYINLNTGQTFINYY
KSQEASVVDNIKICSNDNGSGNFKRVCITIRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEY
FGKMLQAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNVQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCIDCGSLLSPLL
EKPPPYWSSMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttttctacaaagtggagtaatttacccacaggtccgagtctgaagaacctgacc
cagggcgggttcggtgtcctgaaggagactcagcatgaggcggtccaggacctgacgaaa
gcccacatcgagtctttcgaccaggctgtcaccggcggactgagccgggtcgtacaggcc
atacctcctttggagttcaccgttaataatgacaggatcagcctttcgttcgtcgaggcc
tccatcaacaacccggtggttgccaaagggaacgtctgcagggacatgagggtgtttcct
gcagagtgcaggggaaggagatgctcatacaaaggaaagctggtggctgacgtcagctgg
tcggtcaatggaattcccaaagggatcatcaagcagtccctgggtcaggtgccaatcatg
gtgaggtcaaagctgtgcaacctctatggtatgtctccaaaagagctagttgaacaccat
gaagaagcagaggaaatgggaggttatttcgtcgtgaatggaaatgagaaggtgatccga
atgctgatcatgccgaggaggaactatcctattgccatgtcaagacctaagtggaagagc
aggggccagggctacactcagtatggtatatctatacattgtgtgaaggaagagcacaca
gccatcaacatgaatcttcactatctggaaaacgggactgtgatgctgaacttcatctac
caaaaggagctcttcttcctcccactaggctttgcactcaaggccttggtggacttcaca
gacttccagatcttccaggagctgatcaagggccgtgaggacaactccttctacaagagc
tgtgcctcggaaatgctgcgaatcgtcatggaggagggctgcaccacccgcagcaaggtg
ctcaattacctgggagagcgcttcagggttaagatgaaccttcctgagtggtacacaaac
gagcagtgtgccaacttcctgatagatgagtgcatctgtatccacctgaagtcagatgtg
gagaagttctacctgctctgtctaatgaccaggaagcttttcacatttgccaagcaggag
tgcatggaggagaatcccgacagcatcatgtgtcaggaagtgctcactcctggtcagctc
tacctcatgttcctgaaggagagagttgctgcctggctggtgtctgtgaagctggccttt
gacaagagaggcagccgactgagtggaggatggaacgccgaaaacatgataaagctattc
aacatgggcggtgatgtgaccaaaccttttgaatatctgctggctactgggaacctcaac
tccaagacaggtctcggcatgctgcagaacacaggactgtgtgtcgtagccgacaagctc
aacttcatccgctacctgtcccacttccgctgcgtgcacagaggagcagcgttcgccaag
atgaggaccacctctgttcgtaagctgctgcctgagtcgtggggcttcctgtgtcccgtc
cacaccccggacggagagccttgtggcctcatgaatcacatgacagccagctgcgagatt
gtggcaccaacctcgtccaccacaaccatgcctgctctgctatgttccctcggtgttatt
cccgtggacggatctcctggtcaacctttttcagactgctaccctgtggtgcttgacggg
gccgttgtaggctggttggagactgaattagctccagttgtggttgactcactacgtagt
ttcaaggtactgagagtaaacaagatccctccctggactgagatcgtcctggttcccaaa
acaggcaaggccagcttgtacccaggcctgttcctcttcacaacgccctgtcgtatggtg
cggcccgtacgcaatttagctcttggaaaggaagagttaattggcacctttgaacaactt
tatatcaatgtgggcatctttgagggtgagatcgagcccggtgtgaccacacaccaggaa
ctgttcccacacagtatgctgagcgtggtggccaacttcatcccctactcagatcacaac
cagagtccgaggaacatgtaccagtgtcagatgggtaagcagactatgggattccccctg
cactcgttcacggaccgctcagataacaagctgtaccgactccagaccccacaaagcccg
ctggtcaggccctacatgtacgaccactacaacctggacaactaccccagcggcacaaac
gccattgtggctgtcatatcctacaccggctatgacatggaagatgctatgattgtgaac
aagtcctcgtgggagagaggcttcgcccatggaagcatctataagactgagctggtggat
ctggcggacaaggtgaggggagaggacgccgtggtgtttgggaccaagccaggcgatcct
aaggtggatggaagactggacgctgatggacttcctcacattggatcaactcttaagtat
ggagaccccttctacagctacatcaacctcaacactggtcagaccttcatcaactactac
aagagccaagaagcttctgtagtcgacaatataaagatctgcagcaacgacaacggctca
ggcaatttcaaacgagtttgcatcaccatacgagtgccacgaaaccccaccatcggtgac
aagttcgccagtcgccacggtcagaaaggcatcctgagccgcctgtggccggctgaggac
atgcccttcacagagagcggcatgactcccgacattctcttcaacccccacggcttcccc
tcccgtatgactatcgggatgctcatcgagagcatggccggcaagtccggcgccctgcac
ggcctgagccacgacgccacaccctttactttctctgaggagaactctgctctggagtac
ttcggtaaaatgcttcaggctggaggttacaactattacggcacggagcggctctacagt
ggcctgagcggtcaggagctagaggccgacatcttcatcggggtcgtctactaccagcgg
ctacgtcacatggtctctgacaaatttcaagtgaggaccacgggagcgcgagacaaggtg
accaaccagccggtgggagggaggaacgtccagggaggcattcgttttggagagatggag
cgagacgccctgctggcccacggctcgtccttcctgcttcacgatcggctcttcaactgc
tcggaccgatctgtagcgcaggtgtgcattgactgtggcagcctcctctcccctctgtta
gagaaaccccctccttactggtcgtccatgcgccaccgtaagactgtgtgcaccctgtgt
ggcaaaagtgactctattgactcggtgtctgttccttacgtcttccgctactttgtggcc
gagctcgctgcaatgaacatcaaagtaaaattagatgtaaagtaa
DBGET
integrated database retrieval system
