KEGG   Paralichthys olivaceus (Japanese flounder): 109635132
Entry
109635132         CDS       T06037                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:pov00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pov01009]
    109635132 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pov03036]
    109635132 (kdm5c)
Enzymes [BR:pov01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     109635132 (kdm5c)
Protein phosphatases and associated proteins [BR:pov01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     109635132 (kdm5c)
Chromosome and associated proteins [BR:pov03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109635132 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD PHDvar_NSD DUF3829_2nd TFR_dimer
Other DBs
NCBI-GeneID: 109635132
NCBI-ProteinID: XP_019951632
LinkDB
Position
Unknown
AA seq 1596 aa
MAVAGRAMEGEEFVPPPECPVFEPTWEEFQDPLGYIAKIRPIAEKSGICKIRPPPDWQPP
FSVELDTFRFTPRIQRLNELEAETRVKLNYLDRIARFWEIQASSLKIPHIERRILDLFSL
SKIVTSEGGFEMVCKERRWARVAQRLGYPPGKNIGSLLRSHYERIVYPFEMFQSGASLPH
CKPKHYDGEDVDKEYKPHSIPLRQSVQPSKIISYGRRANRCQPDGPEDLAPHPLTAGSQL
ISAPEPTEEDIEKNPELKKLQIYGAGPKMMGLGLVARYKGIRKKDELPQTVTVKENVSVA
PVDTPVKAEPLEPPEKQSEGATSSPQPPPPSITIKTEVKKEEPENGKDNDAEDDDPDKPC
TKMTMRLRRNNNPQCVDSFVCRMCGRGDDDEKLLLCDGCDDNYHTHCLLPPLIDPPKGNW
RCPKCVAEECKKPAEAFGFEQATREYTLQSFGEMADAFKADYFNMPVHMVPTELVEREFW
RLVSSIEEDVTVEYGADIHSKEFGSGFPMNNGKRKLTTEEEDYARSGWNLNVMPVLEQSL
LCHINGDISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAERLE
EVMKTKTPELFEFQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGEFVITFPRAYHSGFN
QGYNFAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAASPEKLDLNLAAAT
HREMFIIVQEERKLRKGLMERGITEAEREAFELLPDDERQCDKCKTTCFLSALACSKCPE
RLVCLYHTQDLCNCPTEKLYLRYRYTLDELLAMLHRLKVRSESFDSWANRVKEALEQEEG
NKIGINDLELLKTEASDKKFPDNELLRRLNTVLKDIERCQQTSNELLDESKSSKNKMTLA
ELKSLVETMHNLPCVMNKLEEVQAVLQTVEEFQSQAQALVSDRDWRRDSPPPERLQTLLE
EGGKLPVMVPECDLLQGLKEQGHWLAEVRCTLGTEGGERQEVTLDVLRILMQAGCNVPQS
VSVETAMAELQELLTIAERWEEKAEICLEQSQKHPLSTLEAIVNEAQLIPVKLPNILSLQ
GCLTRARAWVTDLDEIQNGEHYPCLDDLEGLVAIGRDLPVFMEELRQLELQVASAHSWRD
KATKTFLKKSSQHSLLEVLCPCAKRRERRGGTEALDDILDDSDSNTLGLSAQDLRDPAAI
VMAFKEGEHQEKEALLRLQKLNICKSGLNASSCKENGRWDETMETDKSSHSENSVKENGN
SNHTCTTPPVTVCVCAGQPRAPQLRCHLCKDWFHGGCVPFPSLLPSSGLLTNPLCWWDWE
ARFLCPQCERSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEALETS
ELQQALQKLQELKETLHSEAGKDEDMEKKTGKSSVIVLSDSEGGEGEDGVIDLTAENSPK
KKTNESNGTQAGCENGTSKKSNVTGVGSLLPLLPLLKGQVVELSTATRNHLEELQLEGDL
LEVSLDQTHIIHRVLQASSVPPKDSLHTLIQIELEEQRRTSRSRAKDSKRKRKSHRGGCG
DVAGERSLDASESKKTCPLSHSPSPHLPDQTRPEIL
NT seq 4791 nt   +upstreamnt  +downstreamnt
atggctgtcgccggaagggcaatggaaggggaagagtttgtccctcctccggagtgtcca
gtatttgagccgacatgggaggagtttcaggatcccctgggctacatcgccaagatacgt
ccgatcgcagagaagtctggaatctgcaaaattcgacctccgccagattggcagccacca
ttttcagtggagctggatacctttcgcttcacaccccgcatccaaaggctcaatgagctg
gaggcggagaccagagtaaagcttaattatttggaccgcatcgccagattttgggaaatc
caggcatcctcgttgaaaatcccacacattgaaagacgcatcctcgatcttttcagcctg
tcaaagattgtgacgagtgaaggaggctttgagatggtctgtaaggagcgccgctgggct
cgtgtggcccagaggcttggataccctccaggcaagaacatcggctctctgctgcgctca
cactacgagaggatcgtctacccctttgaaatgttccagtctggtgccagcctgccgcat
tgcaagccaaagcactatgatggtgaagatgtggataaagagtacaagccccactccatc
cccctgcgacagtcagtgcagccatccaaaatcatcagttacgggcgcagagcaaacaga
tgccagcctgatggtccagaggatctggccccccatcctctcaccgctggctctcaactc
atctctgcgcctgaacctacagaggaagacatcgagaagaatccagagctgaagaagcta
cagatctatggtgctggacctaagatgatggggctcgggctggttgcaaggtataaaggc
atcagaaagaaagatgagctgcctcagactgttaccgtcaaagaaaacgtgtcggtggcc
cccgttgataccccagtgaaggcagagccactggagcctccggagaagcagagtgaaggg
gccacatctagtccccagccgcctcccccgagcatcacgattaagacagaagtgaagaaa
gaagaaccagagaacgggaaagacaatgacgcggaggacgatgatccagataagccgtgc
accaaaatgaccatgcggcttcgacgcaacaacaacccacaatgtgttgattcttttgtg
tgtcgaatgtgtggtcggggagatgatgatgagaaactcctgctgtgtgatggctgtgat
gataactaccacacccactgtctactacccccactcattgatcctcccaaaggcaactgg
cgatgtcctaagtgtgtggcagaggagtgcaagaagccagcagaagcatttggctttgaa
caagctacacgagagtacacgttgcagagttttggggaaatggctgacgccttcaaagca
gattacttcaacatgcctgtccatatggttcccactgagcttgtggaaagagagttctgg
aggttggtcagtagcatcgaggaagacgtgactgtggagtacggagccgacatacactcc
aaagagtttggcagtggcttcccaatgaacaatggcaagaggaagctcacaacggaggag
gaggactatgctcgctctggctggaacttgaatgtgatgcccgtgctggaacagtcactc
ctgtgccatattaacggagacatctctgggatgaaggtgccatggctttacgttggcatg
gtgttctcagctttctgctggcacatcgaggatcactggagctactccatcaactacctg
cactggggtgaacccaaaacatggtatggagttccctctgtggcagctgagcgactggag
gaggtgatgaagacgaagacccccgagctgtttgagtttcagcctgacctcctgcaccag
ctggtgaccatcatgaaccccaatatcctcatggctcatggtgtaccggttgtacgcacc
aaccagtgtgctggcgagttcgtcatcaccttccccagagcctatcacagtggctttaat
cagggatataactttgctgaagctgtcaacttctgcactgcagactggctacctgctggc
cgatcctgtattgagcactaccgccgtctaaggaggtattgtgtattctcccacgaggag
ctcacctgtaaaatggctgccagcccagagaaactagatcttaacctggccgcagccaca
caccgggaaatgtttattattgttcaggaggagaggaagctgcggaagggactgatggaa
cgggggatcaccgaagcagagcgcgaggcatttgagctgctgcctgacgacgagcgacag
tgtgataaatgcaagaccacatgcttcctttctgctttggcgtgttcgaaatgccccgag
cgtctggtgtgtctctatcacactcaggatctgtgcaactgccccactgaaaaactctac
ctcaggtacagatataccctggatgagttgctggccatgcttcaccggttaaaggttcga
tctgagtcttttgattcctgggccaacagagtgaaagaggcacttgagcaagaagaagga
aacaagataggaattaatgacctggaattgctgaagacggaggcgtcagacaaaaagttt
ccagacaacgaacttctccggagactcaacacagttcttaaagacatagagcgctgccaa
cagacgagtaatgaactcctggatgagtcaaagagcagtaaaaataagatgaccttggca
gagctgaagtccttggtagagacgatgcacaatctgccctgtgtgatgaacaagttggag
gaagtgcaggcggtgctgcagacagtagaggagttccagagccaggctcaagcattggtc
agtgacagggactggaggagggactcgccaccaccagagcgattgcagacattgttggag
gagggtggcaagctgcccgttatggtgccagagtgtgatttgcttcagggcctgaaggag
cagggccactggctggcagaggtgaggtgcaccctgggcacagaaggaggtgagaggcag
gaggtgacgttggatgtgttaaggatcctgatgcaggcaggttgcaatgtgccccagagt
gtatctgtggagacggccatggcagagcttcaggagctgctcacaatcgcagagcgttgg
gaggagaaagcagaaatctgcctcgaacaaagtcaaaaacaccccctctccaccctggag
gcaattgtgaacgaggcccagcttatcccggtcaagcttccaaacattctgtctctacag
ggctgtctcacacgagcacgggcctgggtgacggacttggatgaaatccagaatggggag
cattacccgtgtctggatgacctggagggcctggtggctattggaagggatctgccagtt
ttcatggaggagctaaggcagctggagctgcaggtggccagcgctcactcctggagggac
aaggccaccaagaccttcctgaagaagagcagtcagcacagtctgctagaggtattatgt
ccgtgtgcaaaaaggagagagaggcgaggtgggacggaggccttggatgatattttggat
gattctgattccaacactctgggcctctctgctcaggacctgagggatcctgccgcgatt
gtgatggcgttcaaagaaggagagcaccaggagaaggaagcactactgaggttacagaaa
ctgaacatatgtaaatctggacttaatgcttcaagttgcaaggagaacgggaggtgggac
gagaccatggagacagacaaatccagccactcagagaactctgtaaaagagaatggcaac
agtaaccacacctgcaccaccccccctgtgacggtgtgtgtgtgtgccgggcagccccgt
gcccctcagctccgctgccatctgtgtaaggactggttccatggtggctgcgttcctttc
ccctccctgctcccctcctctggactgctgactaacccgctctgctggtgggactgggaa
gcgcgtttcttgtgtccgcagtgcgagcggtcacggcgcccacgcctggagactatcctg
gcattactcgtggccctgcagaggctgccggtgcgtctccctgaaggagaggccctgcag
tgtctcacagagagggccatcacctggcagggccgagctaaagaggcgctggagacgtcc
gagctgcagcaggctcttcagaagctgcaggaactcaaagagactctgcacagtgaagca
gggaaagatgaagacatggaaaagaagaccggaaagagctccgtcatagttttgtcagat
tccgagggaggcgaaggagaggatggagtcattgatctgacggcagagaattcacctaaa
aagaaaaccaatgaaagcaatggcactcaggctggatgtgaaaatggcaccagcaagaag
tcaaacgttacaggtgtggggtctctgctgcccctgctgcctctgctgaagggccaggtg
gtggagctttctacggccaccaggaaccatctggaggagctgcagctggagggagatctg
ctggaggtgtctctggaccagactcacatcatccaccgagttctccaagcttcctctgtc
ccacctaaagactcactgcacacactcattcagattgagcttgaagagcagagacgaacc
agccgcagccgagccaaggactccaaaaggaagaggaagagccacagaggcggctgtggg
gacgtggcaggcgaacggtcactggacgcctctgagtcaaagaaaacctgtcccctcagc
cacagcccttctcctcacttacctgaccagactcgcccagagattttgtga

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