Paralichthys olivaceus (Japanese flounder): 109635312
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Entry
109635312 CDS
T06037
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03250
Viral life cycle - HIV-1
pov04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109635312 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
109635312 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109635312 (samhd1)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109635312 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
109635312
NCBI-ProteinID:
XP_019952005
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MHLLHATRVLCELRSAVSGGVGLNVTGFLLLHRPEQAPLRICMENRKRPLAPLPGESFNT
PEKRATVGRQPDSDYTDYRRWGVEETCRYLRGEGLQEWEDTFREQKITGVGLRDLTDADL
QKIGVKLLGDRLKILHSVKRLGQIERDSSKVFNDPIHGHVELHPLLIRIIDTPQFQRLRY
LKQLGGTYFVFPGASHNRFEHSIGVGHLAGQLVQALNDRQPDLLISRRDILCVQIAGLCH
DLGHGPFSHMFDGKFIPKARPGFTWKHEEASLAMFDYLVNDNNLKPVMEQHGLVLPDDLE
FIKEQIAGPLGTNGANANGWPYRGRPEDKSFLYEIVANKRNSIDVDKWDYLARDCYHLGI
NNNFDYHRCLMFARVCEVDGQKQICTRDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIESM
ITEAFLKADPYIQIQGSGGRMFTLSTAIDDMEAYTKLTDHVFEQILHSSSEELAEPRQIL
RNIVCRRLYKCLGQTQPSKSLKVTPDAIKDWEKELAKSIPQTGAQDVNLQPDDFIVSVIP
LDYGMKDKDPINDVRFYCKDDTTKAVQIRKNQVSKMLPENFAEQLIRVYFKQTDEKRVEA
AKKHFVQWCMNRNFSKPKDGDIIAPELTPLKRWHTSNDSGSSVNSVEGSGQKRGKKLTF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttctccatgcaaccagagtcttgtgtgagctgagatcagctgtgtcaggcggc
gtggggctcaacgttaccggcttcctgctgctgcatcgacccgagcaagcgccgcttcgg
atctgcatggagaatcgaaaacgaccgttggctccgttgcccggcgaaagcttcaatacg
ccggagaagagagcgaccgtcggccggcagcctgactcggattacacggactacaggcga
tggggtgtggaggaaacgtgtcggtacctgcggggagagggtctccaggagtgggaggac
acgttcagagaacaaaagataactggtgtgggcctgagggacctcacagatgcggatctg
cagaagattggagtaaagctcctcggtgaccgtctgaagatcctgcacagtgtcaagagg
ttggggcagatagagagagattcaagcaaggtgtttaatgatcccatccacgggcatgtg
gagttacacccacttctcatccgaatcattgacacacctcagttccagagactgcgatac
ctcaagcagctcggagggacctactttgttttccccggagcgtcccacaaccgctttgaa
cactccatcggagttggtcacttggcaggacaacttgtacaggctctgaatgatcggcag
ccagatctcctcatctctcgcagagacatcctctgcgtgcagatcgctgggctctgccac
gacctgggacatgggccattttcccatatgtttgatgggaagttcatccccaaagcacgt
cctggttttacctggaagcacgaggaagcctctttagccatgtttgattacctggttaat
gacaacaacttgaagccggtgatggagcagcacggcctggtgctgcctgacgacctggag
tttatcaaggagcagattgctggaccattaggcactaatggagctaatgccaatgggtgg
ccatacagaggccgtccagaggacaagtcctttctctatgaaattgtggccaacaaaaga
aatagcattgatgtggataagtgggactaccttgccagggactgctaccacctgggcatc
aacaacaactttgattatcaccgctgccttatgttcgccagggtgtgtgaggtggacggg
cagaagcaaatctgtaccagagacaaggaggtgggcaatctgtatgacatgttccacaca
aggaactgtctccacagaagagcctaccagcacaaggttggcaacatcatagagagcatg
atcactgaggcctttttgaaagcagatccatacatccagattcaaggctcaggagggagg
atgttcactctctccacagccatagacgacatggaggcctacaccaagctgacagaccat
gtgtttgaacaaatactccactcgtcctcggaggagctggctgaaccgaggcagattcta
cgcaacatcgtctgtcggcgcctctacaagtgtctgggccaaacccagccaagcaaaagt
ctgaaggtcaccccagatgcgattaaagactgggaaaaagaattggccaagtccatccct
cagactggcgcccaggatgtcaacctgcagccggacgactttatagttagtgtcattcct
ctggactatgggatgaaggataaggaccccatcaacgatgtacgattctattgcaaagat
gacacaactaaagccgtccagatacggaagaaccaggtgtcaaagatgcttccagagaac
tttgctgagcagctgatccgggtctacttcaaacagacagatgagaagcgtgtggaggcc
gccaagaagcactttgttcagtggtgcatgaataggaatttctcaaagcctaaggacgga
gacatcatagcgccggagctgacccctctgaaaaggtggcacacatcgaatgacagcggc
tcgagtgtaaacagtgttgaagggagtgggcagaaaagaggcaaaaaactcaccttttag
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