Paralichthys olivaceus (Japanese flounder): 109635555
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Entry
109635555 CDS
T06037
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov00260
Glycine, serine and threonine metabolism
pov00630
Glyoxylate and dicarboxylate metabolism
pov00670
One carbon pool by folate
pov01100
Metabolic pathways
pov01200
Carbon metabolism
pov01230
Biosynthesis of amino acids
pov01240
Biosynthesis of cofactors
pov04981
Folate transport and metabolism
Module
pov_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
109635555 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109635555 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109635555 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
109635555 (shmt2)
Enzymes [BR:
pov01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
109635555 (shmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
DUF5857
Motif
Other DBs
NCBI-GeneID:
109635555
NCBI-ProteinID:
XP_019952378
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MLSFALRRLTRPLRHRAPLLASVRGQQSHAATNTVNEDRPWTGQDSLAKDDPEMWYLLQK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPGLWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNIATGLIDYEQMEMTAKLFRPKLIIAGTSAYARLIDYSRIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFEYADLVSSTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQANSPMFKEYIAQVLKNAKSMAT
ALLSKGYTLVSGGTENHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEGDFVQVVEFMDEGFKIALDVKKKTGKLQEFKNFLLEDPETVARIA
DLRHRVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctctgaggcggctcacacggcctctgcgccacagagcccctcttctt
gccagtgtacgtgggcagcagtcccatgctgccaccaataccgtgaatgaagatcgtcca
tggacaggccaggacagcctggctaaggacgaccctgagatgtggtatcttctgcagaaa
gagaaggacaggcagtgccgaggtctggagctcattgcatctgagaatttttgcagccga
gcagctctggaagctcagggctcctgtctgaacaacaaatactctgaaggctacccaggg
agaagatactatggtggagcagaagtggtcgaccaaattgagctgctgtgtcagaagcga
gccctggaggcttttgacctggacccaggtctgtggggtgtgaacgtccagccatactca
ggctcacccgctaactttgctgtctacacggccgtcctcaacccccacgaccgcatcatg
ggcctggacctgcctgacggaggacatctgacccatggctacatgtctgatgtaaagagg
atctcagcaacctcaatctattttgagtccatgccatacaagctaaacattgcaacagga
cttatagactatgagcagatggagatgacggccaagctgttcagacccaagctcatcatc
gctggcaccagcgcctatgcccgcctcattgactacagccgcatcaagaagctgtgtact
gacatcaaggcctacatgcttgcagacatggcccacatcagcggtctggtcgcagccaaa
gccatcccctctccctttgaatacgctgacctggtctcgtctaccacacacaaatccctc
cggggagccagggctggcctcatcttctaccgcaagggcgttcgctcagtggacaagaag
gggaaggagatcatgtatgacctcgaggacaaggtcaacttctctgtcttcccctcgctg
cagggtggacctcacaaccacgctatcgctggtgtggctgtggcactcagacaggcaaat
tctcccatgttcaaggagtatattgcccaggttttgaagaacgctaagtcaatggccaca
gctcttctcagtaaaggctacaccctagtatcaggcgggaccgagaaccacctggtcctc
gtggacctgcgacctaaggggattgatggagctcgagccgaaagggtgctggagcttgtg
tccatcactgccaataagaacacgtgccctggggacaagagcgccctgactcctggtggc
ctcaggctaggtgctccagccttgacatccagacagttcaaagaaggagactttgtccaa
gtggtcgagttcatggacgagggctttaagatcgcattggatgttaagaaaaagacagga
aagctccaagaattcaagaactttcttctcgaggacccagagactgtggctcgcatagct
gatctgcgccaccgcgttgaagcttttgccaggcccttccccatgccaggcttccacgat
cattag
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