Paralichthys olivaceus (Japanese flounder): 109635571
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Entry
109635571 CDS
T06037
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109635571 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109635571 (smarcd1)
03036 Chromosome and associated proteins [BR:
pov03036
]
109635571 (smarcd1)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109635571 (smarcd1)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109635571 (smarcd1)
PBAF complex
109635571 (smarcd1)
GBAF(ncBAF) complex
109635571 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
109635571
NCBI-ProteinID:
XP_019952401
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MPPSSRMTPQGPAMGPPGYGNSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRNQHTKK
KKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIF
ISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIELD
KDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLARML
GIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHALL
MPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNKIH
ETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYYQP
WAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcctccatccagccgtatgaccccacagggaccagccatgggccccccaggatacggc
aacagccccgtgtctcgccctgggatgcctggtgtcatggacccgtctcgtaagaggcca
gctccacagcaaattcagcaggttcagcagcagcagaaccgcaaccagcacacaaagaag
aagaagatggctgataaaattctacctcagaggatcagggaactggtcccagagtctcag
gcttatatggatctgctggcttttgagaggaagctggaccagaccatcatgcgcaaaagg
ctggacattcaagaggccctcaagaggcccattaagcaaaagaggaagcttcggatcttc
atatcaaacaccttcaaccctgcaaagccagatgctgaggacggagaaggcacagttgca
tcgtgggagctgcgtgttgaagggcgtctgctggaagatacagccgtgtccaaatatgaa
gccaccaaacagaaaaggaagttttcttctttcttcaagtccctggtgattgagttggac
aaggacctttatggtccagataatcaccttgtggaatggcacaggaccgccaccacccag
gagactgatggttttcaggtgaagaggccaggtgacgtgggtgttcgttgcaccgtcctc
ctcatgcttgactaccagccccctcaattcaagctggacccccggctggctcgaatgctg
ggtatccacacccagaccagacctgttatcattcaggcactttggcagtacgtcaagacc
cacaaactccaggaccctcatgagcgcgagttcatcaactgtgacaagtacctgcagcag
atttttgagacccagagaatgaagttctctgagatcccgcagcgcttgcacgcactgctg
atgcctccagagcccatcatcatcaaccatgtgatcagtgtggatcccaatgaccaaaag
aagactgcttgctatgacattgatgtggaagtggacgacactctgaagacccagatgaac
tccttcctgctctccacagccagtcagcaggaaatagcaggactggacaacaagatccat
gaaaccattgagaccatcaaccagctgaagacccagagagagttcatgctgagttttgcc
agagatcctcagggctttattaacgattggctgcagtcccagtgcagagacctcaagacc
atgactgatgtggtaggaaacccagaggaagagcgtagggctgagttttactaccagccg
tgggctcaggaggccgtctgtcgctacttctactccaaggtccagcagagacgacaggag
ctggagcaggcgctcggcatcaggaacacctaa
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integrated database retrieval system
