Paralichthys olivaceus (Japanese flounder): 109635662
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Entry
109635662 CDS
T06037
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03030
DNA replication
pov03420
Nucleotide excision repair
pov03430
Mismatch repair
pov03440
Homologous recombination
pov03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109635662
03420 Nucleotide excision repair
109635662
03430 Mismatch repair
109635662
03440 Homologous recombination
109635662
03460 Fanconi anemia pathway
109635662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109635662
03032 DNA replication proteins [BR:
pov03032
]
109635662
03400 DNA repair and recombination proteins [BR:
pov03400
]
109635662
Transcription factors [BR:
pov03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109635662
DNA replication proteins [BR:
pov03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109635662
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109635662
MMR (mismatch excision repair)
109635662
DSBR (double strand breaks repair)
HR (homologous recombination)
109635662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Extensin_1
BB0158
RADX
IBR
Motif
Other DBs
NCBI-GeneID:
109635662
NCBI-ProteinID:
XP_019952554
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MSVELTQGAINALLGGSQVNNPVLQLLNMRKISSPTGPNRFRLMMSDGQHSSTSFLLVTQ
LNNLAEENLLEPNCVCMLKKTITNTLADGRHVVVVMAIEILQSAEETQGRIGSPTAYGTD
DTMPSLGNLGSRTSVSSSSAAVPGPSNKNSSTYSPPRGGGRGFVGTSPMKASPMKASPMK
SSPMMMSPMKASPMKASPMMSPMKASPMMMSPMKFSPMKTSPMKFSPMKATDSSPGSSTK
VMPIETLHPYLSRWTIRARVTNKSNIRTWSNSKGEGQLFTFEIVDESGEIRVTAFNKEVD
KFFSLVEQGKVYYISKATLKVANKQYTKVKNQYEITLHAQSSVVLCDDSQGVPTLHCDFV
PIAELENRDKDAIIDVIGVCKSVEDVSRITTKTSREVSKRALSLIDATGTVVTVTLWGEE
AEKFDGREQPVVAIKGARLSDFGGISLSALFSSTVMVNPDIPEAFRLRAWYDQGGFTLKS
QSLTNTRSASSGTKINWKTLSDVKNENMGHGEKADYFSCVATLLYTRKENCLYQACPSAD
CKKKVIDQQNGMYRCEKCNREFPNFQYRLLLSANLADFGQNQWVTCFQETAEVLLGHSAQ
TLGELRDTDETTFDEVFQKAHFKTHIFKNKVKIETYNDETRVKVTVIEVQPLDHREYSRR
LLSNIRSLAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggagctaacacagggggccatcaacgccctgttgggtggctcacaggtgaac
aaccctgttctgcagctgctgaacatgcgtaagatcagcagtcccactggaccaaacagg
ttccggcttatgatgagtgacggtcaacactcatcaacctccttcctgctggtcactcag
ttaaacaatctggctgaagagaacctcctggaaccaaactgtgtgtgtatgctgaagaag
accatcaccaacactctggcagatggcaggcatgtcgtggttgtgatggctatagagatc
ttgcagtcagctgaggaaactcaaggaaggattggaagtcccactgcatatggcacagat
gatacgatgccatccctagggaatttgggctcaaggacttctgtgtcatcttcatcagcc
gcagtaccgggaccctccaacaagaacagcagcacgtattctcctcccagaggcggtgga
agaggttttgtggggacgtcacccatgaaggcctcacccatgaaggcctcacccatgaag
tcttcacccatgatgatgtcacccatgaaggcttcacccatgaaggcctcacccatgatg
tcacccatgaaggcttcacccatgatgatgtcacccatgaagttttcgcccatgaagacg
tcacccatgaagttttcgcccatgaaggctaccgactcttctccaggttcttcaacaaaa
gttatgcctattgaaaccctccacccctacctaagcagatggactatcagagcccgagtt
accaacaagtccaatatccgcacctggagtaactctaaaggagagggccagctcttcacc
tttgaaatagtggatgagagtggagaaatcagggtcacagcattcaacaaggaagtggac
aagtttttctctttagtggagcaaggcaaggtatactacatctccaaggctacactgaag
gtggccaacaagcagtacaccaaagtgaagaatcagtatgaaataacacttcatgcccaa
tcgtccgttgtgttgtgcgatgacagccagggagtccccacactgcactgtgactttgtg
cccattgcagagctggaaaacagagacaaagacgccatcattgatgttatcggtgtctgt
aagagtgtggaagatgtatcccggatcaccacgaaaaccagcagagaagtctccaagagg
gccctcagcctaatagacgcaacaggcacagtggtgacagtcacactgtggggagaggag
gcagagaagtttgacggcagagagcagcctgtggtcgctatcaaaggggctcgcttgtct
gattttggaggcatatctctctccgctttgttcagctcaactgtcatggtcaacccagac
ataccagaggcttttagactgagggcctggtacgaccaggggggcttcactctcaaaagc
caatccctgaccaacacaaggtcagcgagtagcggaacaaagataaactggaaaacactg
agtgatgtgaagaacgaaaacatgggacatggagagaaggcagactacttcagctgtgtg
gcgacattgctgtacactcgtaaggagaattgtctgtaccaggcctgtccatctgcggac
tgcaaaaagaaggttatagaccaacagaacgggatgtaccgctgcgagaagtgtaaccga
gagttccccaactttcagtacagactcctactctctgccaacttggcagacttcgggcag
aaccagtgggtgacatgcttccaggagacagctgaggtcttgttgggacacagtgcacaa
acactgggcgagctaagagacacagacgagacgacatttgatgaagtcttccagaaagct
cacttcaagacgcacatctttaaaaacaaagtcaagattgagacgtacaatgacgagact
cgagtcaaggtaacagttattgaagtccaaccactggaccacagggaatacagcagaaga
ctcctcagtaacatccgctcattggccagctga
DBGET
integrated database retrieval system
