Paralichthys olivaceus (Japanese flounder): 109635837
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Entry
109635837 CDS
T06037
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109635837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pov02000
]
109635837
Transporters [BR:
pov02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109635837
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109635837
NCBI-ProteinID:
XP_019952829
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MTKNGKNGHGAYAAAVPNGYAQRPKELEGRGYWGSKAEFILTVMGAIIGPGNVWRFPYLC
YRNGGGVFFIPYVLFMFTCGIPLFFLETALGQYTNQGGITCWKKICPLFQGMGFASHLII
AFSATSYIIIMAWAFFYLFLSFSQDLPWASCGHYWNTDSCLDFNHQNLSLSMMAKENSTL
PVVEFWQRRVLKLSNGIEEVGSLRWELVLCLILTWVICYFCVWKGIKSTGKAAYFTATFP
FLMLFVLLVRGVTLPGAMDGIIYYLYPDISRLSDPQVWMDAGTQILFSYAIGLGFLTSLG
SYNTYNNDCYRDCFYLCLLNSVTSIVAGFAVFSVLGFMTNEQGVDISEVAESGPGLAFIV
FPRAIAMMPMPQVWSVCFFVMIILLGLDSQFVGLECLMTSLVDLFPAHLRQGCRRELLLL
AICTSCCLLGLLLVTEGGMYLLQLLDHHVCSGTTLILLSLFQSVSIGWVYGADRFYNNIT
DMIGYRPYPLMKYCWCYITPITCFGTFIFSIVKYSPLKFNNTYVYPLWANILGWFIATAS
LSLIPLFVLVKVLQGKGTLRQRLILLCQPVDDLPWNQKCPPAPGTNSTAVYTAELKPLSN
TAEVIQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaacggaaagaatggacatggcgcgtacgccgctgctgtgccaaacggatac
gcacagagacccaaagagctggagggacggggatactggggatccaaggctgagttcatc
ctgactgtgatgggcgcgatcatcggacctgggaacgtgtggaggtttccttacctgtgc
tacagaaacggcggaggtgtattcttcatcccatacgtcttgtttatgttcacatgcggt
atcccacttttcttccttgagactgccttaggacaatacaccaaccaggggggaatcacg
tgctggaaaaagatttgtccactttttcagggcatgggctttgccagtcacttaatcatc
gcatttagcgcaacctcctacatcatcatcatggcgtgggcgttcttttacctcttctta
tcattcagccaggatttaccctgggcttcatgtggacactactggaacacagactcgtgc
ttggactttaaccatcaaaacctgagcctcagcatgatggccaaagagaacagcactctt
cctgttgtggagttctggcagcggcgagttttgaaactctccaatggaatcgaggaagtg
ggcagcctgaggtgggaactggtcttgtgtctcatcctgacatgggtcatctgctacttc
tgcgtttggaagggcatcaagtccacaggaaaggcagcctacttcacagccacctttccc
ttcttaatgctgtttgttttgctggtacgcggagttactctacctggggcaatggatgga
atcatttactacctctaccctgacatctctcgcctttcagacccccaggtgtggatggat
gctggcactcagatccttttttcttatgccatcggccttgggttcctgacctctcttggg
agttacaacacttacaacaatgactgttacagggactgtttctacttgtgtctgctgaac
agtgtcaccagcatcgtggcaggctttgccgtcttttctgttttgggttttatgacaaat
gaacaaggagtggatatttcggaggtggcagaatctggaccagggttggctttcattgtc
ttcccacgtgcaatcgccatgatgcccatgcctcaggtgtggtcagtgtgtttcttcgtc
atgattattctgctcggactggatagtcagtttgttgggctggagtgtttgatgacatca
ctagttgatctgttcccagctcacctgcgccagggttgtaggcgtgagctgcttttgctg
gctatctgcacttcctgctgtctgctgggactcttactggtaacagagggagggatgtac
ctgctccagctgttggatcatcatgtctgcagtggcaccacgctgatcctcctctccctt
tttcagtctgtcagcatcggctgggtctatggtgctgatcgtttctataacaacatcaca
gacatgattggttatcgtccatacccattaatgaaatactgctggtgctacattactccc
atcacctgttttggcaccttcatcttctctattgtcaaatactccccgctgaagttcaat
aacacgtatgtttatccactgtgggccaacatcttgggctggttcattgccaccgcctcc
ctctccctcattccactgtttgtgttagtgaaagtgctgcagggaaaaggcactctacga
cagcggctcatattgctctgccagcctgtggatgacctcccctggaatcaaaaatgtccc
cctgcaccaggaaccaacagcactgctgtctacacagcagagctaaaacctttatctaac
actgcagaagtcattcaatga
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