Paralichthys olivaceus (Japanese flounder): 109636243
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Entry
109636243 CDS
T06037
Name
(RefSeq) collagen alpha-1(X) chain-like
KO
K19479
collagen type X alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
109636243
NCBI-ProteinID:
XP_019953421
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MDMRVASILLLVVTLTAAHGERYVVKKMVKAAPQYQPYSVKSQVVSVPGEPGPAGEPGPE
GPAGPPGPPGESAEGLPGPEGPPGPPGAPGRSIAGKPGSPGGPGKPGSPGQHGEKGDTGA
HGPQGPRGAPGSPGSPGPAGLSATGKPGPSGLPGSMGPRGESGLKGHPGIPGLPGAKGDR
GVGAPGPQGETGPEGPMGPTGEPGAAGVGKPGRTGAPGEPGKSGSPGRDGASGPMGPQGP
KGHTGAPGVGMAGKPGDNGAPGMPGPVGPKGHQGPAGATGAPGVPGYGKPGANGEKGERG
ATGSTGATGAKGEQGHTGYTGATGATGSTGPVGPQGERGFPGEAGAGGPKGDTGATGAQG
PKGNKGDQGQQGFQGKQGYPGAAGPPGPRGGPGATGNKGDLGAPGTPGSPGIPGPAGPKG
LPGRAGEPGASGSDGAPGARGSAGPQGPAGAPGLKGHPGLPGAPGPSGLAAKGIPGPQGP
PGLPGDSGADGEAGPAGPPGPPGPPGEVMFEKGKGYSEVMVKSPMSAFTASLATPYPAAG
SPIKFDQIVYNAENHYDPETGIFTCQIPGVYYFAYSIHVNGANALVALYKNGQPVMFTYD
EYNKGFLDQMSGSAVLLLDEQDTVYIQIPDDEANGVFAAENVHCSFSGFLIAST
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacatgcgtgtagcaagcatcctcctccttgtggtgaccctgacggccgcccatggg
gagcggtacgtggtgaagaagatggtgaaggccgcccctcagtatcagccctactctgtg
aagagccaagttgtgtcagtgcctggtgagcctggtcctgcaggtgagcccggccctgag
ggacctgctggtcctcctggccccccaggtgagagtgctgaaggtcttcccggacccgag
ggacctccagggcctcctggagctcctggccgctcaattgctggaaaacctggatcccct
ggtggacctggcaaacctggcagccctggacaacatggtgagaaaggtgacactggagcc
catggcccccagggacctaggggagcaccaggttctcctggaagccccggccctgctggc
ctttccgctactggaaagcctggaccttcaggtcttcctggatcaatgggacctagagga
gagtctggtctgaaaggacacccaggtattcctggacttccaggtgcaaagggagataga
ggggtgggagctcctggacctcagggtgagacaggacctgaaggacctatgggcccaaca
ggtgaaccaggtgctgctggagttggaaagccaggaaggacaggtgcccccggagagcca
ggaaagtcaggtagcccaggtagagatggtgccagtggccccatgggaccacagggacca
aagggacacactggtgccccaggtgtaggtatggcaggtaaaccaggcgataatggtgcc
ccaggtatgcccggtccagttggccctaaaggccatcaaggacctgctggtgccactggt
gcccctggagtcccaggatatggaaagccaggtgcaaatggagagaagggagagagggga
gccacaggtagcacaggagccacaggtgcaaagggagagcaaggtcatacaggatatact
ggtgccactggtgccactggttctactggtcctgttggacctcagggtgagagaggtttc
ccaggtgaagctggtgctggtggccctaaaggtgacacaggtgcaactggagctcaggga
cctaagggaaacaagggagatcagggacaacagggtttccaaggtaagcagggttaccca
ggtgctgctggtcctcctggacccagaggaggccctggagcgacaggcaacaaaggtgat
ttaggtgccccaggtaccccaggttcccccggtattccaggccctgctggacccaaaggt
cttcctggccgtgcaggtgagccaggtgcttctggttctgatggtgctccaggtgccaga
ggctctgctggtcctcaaggtcctgctggtgcccctggccttaagggacacccaggtctc
cctggtgcccctggcccttctgggttggctgctaagggtatccccggacctcagggtccc
cctggtctgcctggtgattctggtgctgatggagaagctggcccagctggacctcctggt
cccccaggtccccctggtgaggttatgtttgagaagggcaaaggctatagtgaggtcatg
gtcaagtcccccatgtctgctttcactgcttctctggctaccccttaccctgctgctgga
agccccattaagtttgaccagatagtgtacaatgctgagaatcattatgaccctgagact
ggcattttcacttgccaaattcctggagtttactatttcgcctacagcatccatgtcaat
ggagccaatgccctggttgctctgtacaagaatggccagcctgttatgttcacttatgat
gagtacaacaagggcttcctggaccagatgtccggcagtgccgtcctcttgctcgatgag
caggacacagtttacatccagatccccgatgatgaggccaatggtgtctttgcggccgaa
aatgtccactgctccttctctgggttcctcattgcttcaacgtga
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