Paralichthys olivaceus (Japanese flounder): 109636653
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Entry
109636653 CDS
T06037
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov02010
ABC transporters
pov04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109636653
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109636653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pov02000
]
109636653
Transporters [BR:
pov02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109636653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
CDC27
Motif
Other DBs
NCBI-GeneID:
109636653
NCBI-ProteinID:
XP_019954058
LinkDB
All DBs
Position
Unknown
AA seq
2383 aa
AA seq
DB search
MGFFRQLFLLLWKNITYRRRNKVQLIIELLWPLFLFVILISVRQSHPPYKQKQCHFPNKA
LPSAGTLPWIQGIVCNINNPCFQSPTPGETPGQFGNFDNSILSRLFVDAHAILSYGGNQS
FSGFQDLMESVRRLGARPGAWPIETVENYMRANETLSTFLLTNTTLSPVTVDQLMKARLN
FQVTVAGAQMQLKDLVCNASMLRQFLTVDGGEAAMNNLQTQLCDLPADVLQEAEHIFLSQ
LDFTKFFTRNRLMANAADLRDISQAVTSVSQEMAVLMDDFSSLSSFAEMSAALRLLSPEN
RTALPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEVTDLDRDNNTTP
FCKSLIHGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAIKQVMKEVNKTFEDLQILQQLN
EAWMEVGPQVKRYMESSVQIQLLQDLLRRPEVAVLVNLRLENTSWTASRISRFLATPSPD
APRNPGAPLTWLDIYNDISHTITTLAQVTECFSLNKLEGLESEGHLIDRALELLEDRQFW
AGVVFLLPNSTSAELPPHVTYKIRMDIDDVTRTNKMKDRFWDPGPAADPFSDMRYIWGGF
VYVQDLVEQAVSRVLTGVKQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSVVPFLVSAALLIAMLKFGDILPYS
DPSVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLNT
THRILASFLSPVAFGFGCEYFSQYEEQGVGIQWYNLRSSPVEGDAYSFTISIIMLYVDAF
IYAIAAWYIEAVFPGEYGIPRPWYFIFQLNYWGGVPLEAGMPIPPAPTEQDEDHIEAEPS
NLILGVSIRNLVKIYKKGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRHDMDIIRRMLGVCPQHNVLFDILTVEEHVWFYGCLKGLSEAEVNAELD
TLLDNVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGKLSCCGSPLFLKSQLGSGYYLTVVKRE
GLNTSTPSTTSICTSTSISTNKLPPLKDSESSLSEDTGLGSEENNSYLAALLALAQHHIP
GARLVEESGSEVVINLPQEAAKNSTLAIFLSDLDQRLTELGISSYGLSDSSLEEIFLRVA
EETDLKAESELQDEPSHGRRPPAGQRVERQCAEEPETESQETDLLSGDGRGGVPMTGWWL
TWQQMRALFVKRWLYARRSRRGLFAQIVLPAVFVLVALLFSLIVPPFGKYPNLQLQPWMY
GQQYTFFSNDAPGNPAMENLLEALLDQPGFGTKCMETEEEHNSTSGQCEGERDGLFMRPQ
VSYSTWQMFNRGNWSRDRPSPECQCSTEDIRRMLPDCPQGAGGLPPPQIRRLTGDILQNL
TTYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGGATEILPQVHHVQDSVMAIRT
RYRVPQNSSLNNLLNRLPDILGGLNSQNNVKVWFNNKGWHAMVSFVNVMNNGLLRASLPP
GPERARHGITAYNHPLNLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPASFVLFLIEER
VSKAKHLQFVSGVKPILYWLANFTWDMLNYTVPATMVVLIFIAFQQQSYVSETNLPALVL
LLLFYGWSITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDEHLNEVN
RILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGSRPTLDPLHWDFIGKNLFAMAAQG
VIFFIFTILLQYKFFIHFRPWWTEPEMPPLGPEDEDVARERERVKSGRAQSDILTMTDLS
KVYKAGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTPITYGEASLSHYSVL
TEMEQVHQLMGYCPQFDAISDLLTGREHLELYARLRGVQEDSVTRVAQWGVKKLGLTQYA
EREAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRAVV
LTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLADTKSSPDSCPVS
SYMKSYFPNIELKERHHNVLQYQLPSHACCLARVFDVLANNYEELGISDFSVSQTTLDQV
FVNFAKEQTDDDGLTDVVISNGTVQTNLTVLPSRINPSTIQPHPPVTPPQQSKTPQPQTI
SSDSKPKEGKSKKAKSSKSKSKEDKSNGEKSNSMAMTTLPQPVEKDQEMPQTSRRGSSGS
DSSNNGVKEQSSKSRKSKHRVQSSSKDPSALFIVGSNSQDSEV
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcagacagctcttcctcctgctctggaagaacatcacataccgcaggagg
aacaaggtccagctgatcatcgagctcctctggccgctcttcctttttgtcatcctcatc
tctgttcgccaatcacaccctccttacaaacagaagcaatgtcatttcccaaacaaagcc
ctgccttcagcaggcaccttgccctggattcagggtatcgtctgcaacatcaacaatccc
tgcttccaaagcccgacaccaggggagaccccgggacaatttggcaactttgacaactca
atactgtctcgtctctttgtggacgcccacgctattctgtcctacggtggaaaccagagc
ttctcaggctttcaggatctgatggagagtgtccggaggctgggagcgagacctggagct
tggccaatcgaaacagtagaaaattacatgagagccaatgagactctttccaccttcctc
ctgaccaacaccactctgtcccctgtgaccgtggaccagctaatgaaggctcgtcttaac
tttcaggttacagtggctggagctcaaatgcagctaaaggacttggtgtgtaatgcgagc
atgttgagacagttcctgacggtggatggaggagaagctgctatgaataatcttcagact
cagctgtgtgaccttcccgctgacgtcctgcaagaggccgagcacatttttctctctcag
cttgacttcaccaagttcttcacaagaaaccgtctgatggccaacgctgcagacctcagg
gacatcagtcaggcagtcacctcagtttcccaggagatggctgtcctcatggatgacttt
tcctccctctccagttttgcggagatgagtgcagcgcttcgtcttctgtcaccggaaaat
cgcacagcgctgcccagagagagtttccgagccttctcgaggatcatgtgcggtcaccct
gaggtcggcggtgaacgcatcccttcactcaactggtatgaagacaatgacatcaagtcc
ttcttaggcaaaaacggcactgaggtcaccgacctggaccgtgacaacaacaccactcct
ttctgtaaaagtttgatccacggtctggagtccaaccctctgtctcgcattgtgtggcga
ggaatcaaacctctctttattggaaaactgctgtacacaccagacacacctgctataaaa
caagtcatgaaagaggtgaacaaaacgtttgaggacctgcagatcctccagcagctgaac
gaagcctggatggaggtgggacctcaagtcaagagatacatggagagcagcgttcagatt
caactgctgcaggatttgttgaggcggccagaggttgcagtcctggtcaacctgcgtttg
gaaaatacttcctggacggcctcgcggatctctcgattcctggccacaccttcaccagac
gcccctaggaatcctggagcacccctgacctggctggacatctacaatgacatcagccac
accatcaccactctcgcacaagtcacagagtgtttctctctgaacaaactggaggggttg
gaaagtgagggtcacttgattgacagagctcttgagctgctggaggacaggcagttttgg
gcgggtgtagttttcctgctgcccaactctacgtctgctgagctgccgcctcatgtcacc
tacaagatccgaatggatattgatgatgtgactcggaccaacaagatgaaggacaggttt
tgggatcctggcccagcagctgacccattcagtgacatgcgctacatatggggcggcttc
gtgtacgtccaggacctggtggagcaagctgtgagtcgtgtcctgactggagttaaacag
actacgggcatctacatccagcagatgccctacccctgctatgtggatgatgtttttctc
cgagtgttgaaccgctcccttccactcttcatgactttggcctggatctactcggtcgcc
atgatcatcaaaggtgtggtgtacgagaaggaggcgaggctgaaggaaaccatgaggatt
atgggtctaggaacaggaacgctgtggctcagctggttcatcagcagcgtggttcctttc
ctggtttctgcagcgcttcttattgctatgctcaagttcggggacatcttgccatacagc
gacccatctgttgtctttttcttcctcatggcatttgccactgccaccatcatgcagtgt
tttctcattagtaccttcttctccaaagccaacctggctgctgcctgtggggggctcata
tactttagcctttacctgccttatgtactgtgtgttgcctggagagaccacctcaacact
acacacagaatcctcgctagttttctctctcctgtggcgtttggtttcggctgtgagtat
ttctctcagtacgaggagcaaggtgtgggcatccagtggtacaacctgcgctccagccct
gtggaaggtgacgcctacagcttcactatctctatcatcatgctttacgtggatgccttc
atctacgccattgcagcctggtacatcgaagcagtgtttcctggtgaatatgggatccca
aggccttggtatttcatcttccagctcaactactggggaggagttcccctggaggcaggc
atgccgattccaccggcacccacggagcaggatgaagatcacattgaagcagagcctagt
aacttgatcctgggcgtgagcatcagaaacctggtgaaaatctacaagaagggagccaaa
ctggccgtaaaccacctcaacctgaagttctatgagggacagatcacctcgttcctcggc
cacaacggagctggcaagaccaccaccatatccgttctgacgggcctgttcccaccaact
tctgggactgtctacatcaaggggatggacattcgccacgacatggacatcatccgaagg
atgctgggagtttgtccacaacacaatgtcctgtttgacatattaacagtggaggagcac
gtgtggttttatggatgtctgaagggtttgtctgaagcagaggtgaatgcagagctggac
actctgttggacaatgttggcctgctgcacaaacgacatgaacagaccaaaaacctctct
ggtggcatgcagaggaagctgtctgtggccatagcgtttgtaggggggtctaaggtggtt
gttttggatgaacctacagctggagttgatccttactcccgcagagggatctgggatctg
ttgctcaaatatcgcaaagaccggaccataatcttgtccactcactacatggatgaggca
gagctgttgggtgaccggatcgccatcatctcccaggggaagctctcctgctgcggctca
ccgctgttcctgaaatcccagctgggatctggttattacctcactgtggtgaagagggaa
ggactcaacaccagcactcccagcaccaccagtatctgcaccagtaccagcatcagcacc
aacaagctgcctcctctcaaggacagtgaatcatcactgagtgaagacactgggcttgga
agtgaagagaacaactcatacctggcagcgttgctcgccttggcacagcaccacatcccg
ggtgcgaggctggtggaggagtcaggaagtgaggtcgtgatcaacctgccgcaggaagct
gctaagaacagtaccctggccatttttctgtccgacctggatcagaggctcactgagctg
ggcatcagcagctacggcctttcagacagctcactggaggagattttcctgcgagtggcg
gaggaaacagacttgaaagctgaatctgagctgcaggatgaaccttctcacggtcgacgg
ccaccagcaggacaaagagtggagcgacaatgtgctgaagaaccagagacagaatcccag
gagacagacctgctgagcggagacggccgaggtggggtccccatgaccggctggtggctg
acgtggcagcagatgagggctctctttgtcaagcgctggctttacgctcggaggagccgc
agaggcctcttcgctcagattgttctccctgccgtgtttgtcctggttgcccttctcttc
agcctaattgtacctccgtttgggaagtaccccaacctgcagctgcagccgtggatgtac
ggacaacagtacaccttcttcagcaacgacgcccctgggaacccagccatggagaactta
ctggaagctctactggaccagccggggtttggtacaaagtgcatggagacagaggaagag
cacaacagcacgagtggtcagtgtgaaggtgagcgggatggtctgttcatgcgaccacag
gtgtcttactccacttggcagatgttcaacagaggaaactggagcagagacagaccctcc
cctgaatgtcagtgcagcacagaggacattcgacggatgcttcccgactgtccgcagggt
gctggtggactgccaccaccacagattcggaggctgactggagacatcctccaaaatcta
acaacttataatatctctgattatctggtgaaaacctactctcagatcctcaagaaaagc
ctgaaaaccaagaagtgggtgaatgaattcagatatggaggcttctccctcgggggcggc
gccaccgagattttacctcaggtccatcatgtccaggactcagtcatggcaatcaggact
cggtacagagttccacagaacagttcattgaataatcttctgaaccggctgccggatatt
ctcggaggactgaacagtcaaaacaatgtcaaggtgtggttcaataacaaaggctggcat
gccatggtgtcatttgttaacgttatgaacaatggtctgctgagagcgagtctaccacca
ggtccagagagggctagacacggcatcactgcatacaaccacccgctcaacctcaccaaa
gagcaactcacagaaatggccatgatgactacatcagtggacgttctggtttctatctgc
gttatcttcgccatgtcctttgtgccggccagttttgtcctttttctgattgaggagcga
gtcagcaaagccaaacaccttcagtttgtcagcggagtcaaaccaatcctctactggctc
gccaacttcacctgggacatgctgaactacactgttccagccaccatggtggtgctgatc
ttcatcgctttccagcagcagtcatacgtttctgagacaaacctgccggctctcgtcctg
ctgctcctcttttatgggtggtccattactcctctcatgtacccagcatcctttgtgttc
agcgttccaagcacagcttatgtggttctgacttccatcaacctgttcattggaatcaac
ggcagcatcgccaccttcgtcctggagctgtttgtagacgagcatctgaatgaggtgaat
aggatcctaaagaaagtcttcctcatctttcctcatttctgtctgggacgaggtctcatc
gacatggccaaaaatcaggccatggcagacgccttccagagactgggcagcagaccgaca
ctagatccactgcactgggattttattgggaagaacttgtttgcgatggcagctcaaggt
gttatcttcttcattttcaccatactgctgcaatacaagtttttcatacacttcaggccg
tggtggactgagcctgagatgcctcctttgggtccagaagatgaggacgtcgccagggaa
agagagagggtcaaaagtggcagagcccagtcagacatcctcaccatgacagacctgagc
aaggtttacaaagcgggcaggaagccagcggttgatcgtctctgccttgggattccacgg
ggagagtgtttcgggctgctgggggtgaacggagcagggaagacgtcaacatttcgcatg
ctgactggagacacacccatcacctatggagaggcttccctcagccattacagtgtgctg
acagagatggagcaggtccaccagctgatgggttactgtccacagtttgacgccatcagc
gacctgctgacaggtcgggaacatctggagctgtacgcccgtctgcggggggttcaggag
gactctgtcaccagggtggcgcagtggggcgtgaagaagctggggctgacgcagtacgct
gaacgagaggctggaggctacagcgggggcaacaagaggaaactctccactgccatctcc
cttattggagctccacctgttatattcctggatgagcccaccactggtatggacccaaaa
gccaaacgatttttgtggaactgcatcctcagcgtcaccaaagagggaagagctgtagtt
ctcacctcccacagtatggaggaatgtgaggctctctgcaccagaatggccatcatggtc
aatggccggttccagtgtctgggatcagttcagcacctgaagaacaggttcggcgatggc
tacaccatcattcttcgtctagcagatactaaatccagcccagactcgtgtcccgtcagc
agctacatgaaaagctatttccccaacatcgagcttaaggagcgtcaccacaacgtgctg
cagtaccagctgccctcacacgcctgctgcctggcccgtgtgttcgacgtgttggccaac
aactacgaggagctgggcatctcggacttctctgtttcacagaccacactggaccaggta
tttgtcaactttgccaaagagcaaactgatgatgatggcctcacagatgtggtcatcagc
aacgggacagtacaaaccaacctgactgtactgccctccaggataaatccatccaccatc
caaccgcacccaccagtcacaccccctcagcaaagcaagaccccacagccacagacgata
tcatctgacagcaaaccgaaggagggaaaatccaaaaaagccaaatccagcaagagtaaa
tctaaagaagacaaatctaacggagaaaaaagcaacagtatggcaatgaccacattacct
cagcctgtggagaaggaccaggagatgcctcagacgagccgcaggggcagcagtggatca
gacagcagcaacaatggagttaaggagcaatccagtaaatccagaaagtccaaacataga
gtacagagctccagtaaagatccatctgcactttttatagtgggcagcaactcacaggac
agtgaggtgtga
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integrated database retrieval system
