Paralichthys olivaceus (Japanese flounder): 109636718
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Entry
109636718 CDS
T06037
Name
(RefSeq) transcription factor SOX-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109636718
Transcription factors [BR:
pov03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109636718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109636718
NCBI-ProteinID:
XP_019954177
UniProt:
A0A3S7I5Z1
LinkDB
All DBs
Position
Unknown
AA seq
780 aa
AA seq
DB search
MEGFLRSSFLLSRVMSSKQATSPFASVVDGDDAMNQEHLSWEKEESAEAHGTPQLPLHSL
LHGKAHPDEVQQLSSIPPESDWDTLVSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGAR
ERSDLLSGSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDESSCMETLLSKEWKEKME
RLNTSELLADVKGTPESLAEKEHQLSTMITQLISLREQLLAAHDEQKKLAASQMEKQRQQ
MELARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQ
QGFLFPPGLSYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPP
LPQPLNASGPISPSSLKNDKSSSSPITQVKEEGTQPLNLSARPKTTELVKSPSSPTQNLF
SGSKNSANSFMGKGGITNPLGGGLGRGSSLDILSSLNSTALFGDQDTVMKAIQEARKMRE
QIQREQLQHHQQGMEAKLSALSSVGLNNCRVDKERAHFDSIGHHLGKLGEDGKIGHRVID
LTRPEDLDGGAGSTEARVFRESRGRNSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNS
NISKILGSRWKSMTNQDKQPYYEEQARLSKLHLEKYPNYKYKPRPKRTCIIDGKKLRIGE
YKQMMRSRRQEMRQFFTVGQPPQLPITTSASMVYPGAITMATTTPSPQMTSECSSASASP
EPTIPVIQTTYNMKLEPNTMANNSAPVNGEDEMDMYEDFEDEPKSDYSSENDTQEPVNAN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggagggctttctacgtagcagctttttactgagcagagtcatgtcttctaagcaagcc
acatctccttttgcctccgtggtcgatggggatgacgccatgaatcaagaacacttgtct
tgggagaaagaggagagtgccgaggcccacggtacgccacagctgcccctgcacagtctg
ctccatgggaaagcccatcctgatgaagtgcagcagctcagcagcataccgccagagagc
gactgggacaccctggtgtcagcccagcagcgcatggaatctgacagcaataaagtatgt
tctctgtactccttccggaacaattctacttccccacataagcccgaggagggggcccgg
gagcgaagtgacctgctgagcggatcagcgtttggaactccggagcgccgcaaaggaagc
ctggcagatgtagtggacacgctgaagcagaagaagctggaggagatgacaaagacagag
caagacgaatcttcatgcatggagacactcctttctaaagaatggaaagagaagatggag
aggctcaacaccagtgaacttttagcagatgtaaaaggtactccagagagcctggcagag
aaggaacaccagctctccacaatgatcacccagctcatcagcctgcgtgagcagctcctg
gctgcccacgacgaacagaagaagcttgccgcctcacagatggagaaacagaggcagcaa
atggagttagctcgtcagcagcaggagcagattgcaagacaacagcagcagcttctgcag
cagcagcacaaaatcaacctcctccagcagcagatccaggtccagggtcacatgcctccg
ctcatgatccccatttttccacacgaccaacgcactctggcagcagccgccgccgcccag
caaggctttctcttccccccgggattgtcttacaagccaggtgataactacccggtgcag
ttcattccatccacaatggcagctgcagcagcgtcaggactcagccccctccagcttcag
caactgtatgcggcccagcttgccagcatgcaggtctctcctggagccaagatgcctccg
ctcccccagcccctcaatgcgagtgggcccatttctccctcctctctgaagaatgacaag
agttcctccagccccatcactcaagtcaaggaggaaggaacacagccgctcaacttgtct
gctcggccaaagacgacagaactggtgaaatccccctcatccccgacacaaaacctgttc
tctggcagcaaaaacagcgccaacagtttcatgggcaagggaggcatcaccaacccactc
ggcggaggcctgggacggggctcatctctggatattctgtccagcctaaactctactgcg
ctgttcggggaccaggacacggtgatgaaggccatccaggaggctcggaaaatgagggag
cagatccagagggaacagctgcaacatcaccagcagggcatggaggcgaagctgtccgcc
ctcagttcagtgggcctcaacaactgcagagtcgacaaggagagggcacattttgacagc
attggccaccacctcgggaagctgggtgaggatgggaagatcggccacagagttattgac
ctcaccaggccagaggacctagatggaggcgctggatccaccgaggcacgagtctttagg
gaatctcgaggaaggaacagcaacgaacctcacatcaaaaggccgatgaacgcgttcatg
gtgtgggccaaggatgagcggcgcaagatcctccaggccttccccgacatgcacaactcc
aacattagcaaaatcttgggttctaggtggaagtccatgactaaccaggacaagcagcca
tactacgaggagcaggcccgtctgagtaagctccacctagagaagtacccaaactacaag
tacaagccgcggcctaagagaacctgcattattgacggaaaaaaactccgcattggcgag
tacaagcagatgatgcggtcaaggcgacaagaaatgaggcagttcttcactgtgggacag
ccacctcagcttcccatcacaaccagcgccagtatggtctatcccggggccatcaccatg
gcaaccaccacgccctcacctcagatgacatcggagtgctctagtgcctcggcgagtccc
gagccgaccattcctgtcatccagaccacctacaacatgaagctagagcccaacaccatg
gcgaacaacagcgcgccagtcaatggcgaggacgagatggacatgtacgaggatttcgag
gatgagcccaaatcagactatagcagtgaaaatgacactcaagagccagtcaacgccaac
tga
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