Paralichthys olivaceus (Japanese flounder): 109636845
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Entry
109636845 CDS
T06037
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pov03009
]
109636845
03036 Chromosome and associated proteins [BR:
pov03036
]
109636845
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109636845
Ribosome biogenesis [BR:
pov03009
]
Eukaryotic type
Pre-60S particles
Helicases
109636845
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109636845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
AAA_22
SPATS2-like
Motif
Other DBs
NCBI-GeneID:
109636845
NCBI-ProteinID:
XP_019954368
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MPSKIMFDTEDRALEDEMDTASEVKALKKKNKEEKKLKKKQSEEQEEQEDPDCEPPAPKK
KKKKEKLAADQINGHDEATDMNGNSNGIETPKKKTKKNTEGDTEKKKKQKKATVEAETNG
HSTQTPSPPREESTSDSEKETETPEQKEGAFSNFRISDVTIKKLKARGVTYLFDIQSKTF
NPVFDGEDVIAQARTGTGKTFSFAIPLVEKLQRDSVVPVRGRAPKVLVLTPTRELAIQVA
KDFKDVVNKLSITCFYGGSSYNPQLDAIRNGIDILVGTPGRIKDHLQNNKLDLSKVKHVI
LDEVDQMLDMGFAEQVEEILATSYERENDSNPQTLLFSATCPPWVYDVAKKYMRPECKHV
DLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGSHGRSIVFTETKKEANELSMN
ASIKQSTQTLHGDIPQKQREITLKGFRSGTFEVLVATNVAARGLDIPEIDLVVQCSPPKD
VESYIHRSGRTGRAGRTGVCICFYQRKEEDQLRYVENKAGITFRRVGVPTANDIIKSSSK
DAVKFLDSVPVTAIGYFRASAEKLIEERGAVEALAAALAHISGATSLEQRSLLTSDAGYA
TMQLVCSQEMHNLGYAWRSIKEQLGEDFENHVHRMTFLKGKTGVCFDVPADKVKQMLDGW
KDGRRWQLTAATELPDLEEKPHNNRDRGFGNGNRGDRGGGFRGGRGRNFGGNGGRSNGFR
NGGGNNRGGNKRSFSQAFDY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctaagatcatgtttgacaccgaggaccgagccctggaggacgagatggacacc
gccagcgaggttaaagccctgaagaaaaagaacaaggaggagaagaagttgaagaagaag
cagtctgaggaacaagaggagcaggaggacccagactgtgaacctccagcaccgaagaag
aaaaagaaaaaagagaagctggcagcggaccaaattaacggccatgatgaggccacagac
atgaatggcaacagtaacggtattgaaacaccaaagaagaagactaagaagaacactgaa
ggagacacagagaaaaagaagaagcaaaagaaagcaactgtagaagcagaaaccaatgga
cattccacccagacaccgtcaccgccgagggaagagtcgaccagtgacagcgagaaagaa
acggaaacaccagagcagaaggaaggggccttttccaacttcaggatctccgatgtcacc
atcaaaaaactgaaagctcggggagtcacttacctgtttgacattcagtcgaaaacattt
aatccagtgtttgatggagaagatgtaatcgctcaagctcgaacaggaacaggaaagact
ttctcctttgccatcccattggtggagaagctccagagggattcagtggtgccggtcaga
ggccgagctcccaaggtcctggtgttgactccaaccagagagttagcgatccaggtcgct
aaggacttcaaagacgtcgtcaacaaactttccatcacttgtttctatggaggcagctca
tacaacccacagctggatgccatccgtaatggtatcgatattttggttggaacccctggt
cgtatcaaagaccacctccagaacaacaaactcgacctgtcaaaggtgaagcacgtcatt
ctggatgaagtggaccaaatgttggacatgggatttgcagaacaggttgaagaaattttg
gctacatcatatgagagagaaaacgactccaatccccagacgctgctgttttcagccacc
tgccccccctgggtctacgacgtggccaagaaatacatgagaccagaatgcaaacatgtt
gacctgatcggcaagaaaacacagaaagctgccacaactgtggagcatctggccatcgcc
tgccactggtcacagcgcgcagccgttatcggtgatgtcatccaggtttacagtggcagc
cacggccgcagcatcgttttcactgagacaaagaaagaggccaacgaactctccatgaac
gcatccatcaaacaaagcacacagaccctccatggtgatattcctcagaaacagagagag
attacgctgaagggcttcaggagtgggaccttcgaggtcctggttgccaccaatgttgca
gcccgtggattagatatccctgaaatcgacctggtggtccagtgttctccacccaaggat
gtggagtcatacatccatcgttcaggacgtacgggccgagcaggcaggactggagtctgc
atctgtttctaccagaggaaagaggaagaccagctgcgctacgtagaaaacaaagcgggt
atcacattcagacgagttggtgttcccactgccaatgacatcatcaagtcgtcaagcaag
gatgctgtcaagtttttggactcagttccggtcacagctattggatacttcagagcttcg
gctgagaagctgatcgaggagagaggagcagtcgaagcactcgctgctgcccttgcccac
atctctggagccacaagtctggagcagaggtcactgctgacctctgatgctggttacgcc
accatgcagttggtgtgttctcaggagatgcataatctgggttacgcatggagatccatc
aaagaacaactgggcgaggactttgaaaaccacgttcacagaatgaccttccttaaaggc
aaaacaggagtttgttttgatgtcccagctgacaaagtcaagcagatgctggacggctgg
aaggatggtcgccgctggcaactgaccgcagccacagagctcccagatctggaggagaag
ccacacaataaccgcgacagaggctttggcaatggtaaccgtggcgacagaggaggaggc
ttcagaggcggaaggggacgtaatttcgggggaaatggcggccgcagcaacgggttcagg
aacggtggcggcaacaacagaggaggaaacaaacgcagcttcagccaagcttttgattac
tga
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