Paralichthys olivaceus (Japanese flounder): 109637055
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Entry
109637055 CDS
T06037
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109637055 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109637055 (polb)
Enzymes [BR:
pov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109637055 (polb)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
109637055 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
109637055 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
Cdd1
DUF4806
Motif
Other DBs
NCBI-GeneID:
109637055
NCBI-ProteinID:
XP_019954723
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTIAKYPNKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMEKMETLILGELKKIGKEYIGTICGS
YRRGAASSGDIDILLTHPNFTSETEKQPKLLHDVVNHLESIGFVTETLSKGDTKFMGVCQ
LQQSGDDDDEEEDEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLN
EYTIRPLGVTGMAGEPLLVDSERDIFEYLQYKYREPKERSE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaggaaagcgccgcaggaatctctcaatgagggaataacagactttcttgtc
gagctggccaactacgagaaaaatgtcaacagggccatacacaagtacaatgcttacagg
aaagcagcatctaccattgccaagtaccctaacaagatcaagagtggtgaagaggccaag
aaactggatggtgttggagctaaaatagcagaaaagattgatgagttcttacaaactggg
aaactgcgcaaactggaaaagatcagaaatgatgacaccagctcttccatcaatttcctc
accagagtcactggaattggccctgctgctgccaggaagttttttgaagaaggggtgaag
acattagaagatctgaaaaagatcgagcacaaactaaaccatcatcagcagattggactc
aagtattttgaggagtttgagaaaaggatccctcgtgctgaaatggaaaagatggagact
ttgattcttggagagttgaagaaaattggtaaagaatatattggaacaatctgtggaagt
tacaggagaggtgctgcatcgagtggtgatattgatattttgctgacacatccaaacttc
acctctgagactgagaaacagccgaagctcctccacgacgtggtcaatcatttggagtcc
attgggtttgtgaccgaaactctttccaaaggagacaccaagttcatgggagtctgccaa
ctgcagcagagtggtgatgatgatgatgaggaggaggatgaagaatacctacacaggcgt
attgatatcaggttaattcctaaggaccagtactactgtggagtcctgtatttcactgga
agtgatatcttcaataaaaatatgagaactcatgctctggagaagggtttcactcttaac
gagtacaccatccgaccacttggggtcactggtatggctggggagcctcttctggtggat
agtgagagagacatctttgaatacctccagtacaaatacagagagccaaaggaacgcagc
gagtga
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